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Entry information : VchCP01_PG030
Entry ID 3777
Creation 2006-08-29 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-07 (Christophe Dunand)
Peroxidase information: VchCP01_PG030
Name VchCP01_PG030
Class Catalase peroxidase     [Orthogroup: CP001]*
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Vibrionaceae Vibrio
Organism Vibrio cholerae    [TaxId: 666 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VchCP01_PG030
start..stop		 S start..stop
VchCP01_SG20 320 1.29e-114 1..155 13..167
VchCP01_AS468 318 1.49e-113 1..154 11..164
VchCP01_N16961 324 6.6e-109 1..155 179..333
VchCP01_AM64 290 7.62e-103 1..142 12..153
Literature and cross-references VchCP01_PG030
Literature Garg,P et al., Molecular epidemiology of O139 Vibrio cholerae: mutation, lateral gene transfer & founder flush. Emerging Infect. Dis. 9 (7), 810-814 (2003)
Protein ref. GenBank:   AAP83970.1 UniProtKB:   Q7WSX5
DNA ref. GenBank:   AY297851.1 [Fragment]
Protein sequence: VchCP01_PG030
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   155
PWM (Da):   %s   16943.05 Transmb domain:   %s   o338-357i477-499o519-541i701-718o
PI (pH):   %s   4.7
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
EDIWHPEKDI YWGSEKEWLA KSGGENSRYS GQRDLENPLA AVMMGLIYVN PEGVDGNPDP LKTAQDMRVT FARMAMNDEE TVALTAGGHT VGKAHGNGKA SNLGPDPEGA ELHEQGLGWN 
NHTSRGIGRN TVTSGIEGAW TTHPTRWDNE YFYLL 

Retrieve as FASTA  
Remarks Partial sequence from genomic, identical to VchCP01_SG20, VchCP01_AS468, VchCP01_N16961 and VchCP01_AS238.
DNA ►
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cDNA►
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