1. Browse the Database
  2. View Redoxidase
Entry information : VchCP01_SG20
Entry ID 3778
Creation 2006-08-29 (Filippo Passardi)
Last sequence changes 2006-08-29 (Filippo Passardi)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2016-01-06 (Achraf Jemmat)
Peroxidase information: VchCP01_SG20
Name VchCP01_SG20
Class Catalase peroxidase     [Orthogroup: CP001]*
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Vibrionaceae Vibrio
Organism Vibrio cholerae    [TaxId: 666 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VchCP01_SG20
start..stop		 S start..stop
VchCP01_AS468 363 6.75e-131 3..179 1..177
VchCP01_N16961 374 7.48e-128 1..179 167..345
VchCP01_PG030 320 1.49e-114 13..167 1..155
SamCP02_SB2B 334 1.9e-112 1..179 162..340
Literature and cross-references VchCP01_SG20
Literature Garg,P. et al., Molecular epidemiology of O139 Vibrio cholerae: mutation, lateral gene transfer & founder flush. Emerging Infect. Dis. 9 (7), 810-814 (2003)
Protein ref. GenBank:   AAP83965.1 UniProtKB:   Q7WSY0
DNA ref. GenBank:   AY297845.1 [Fragment]
Protein sequence: VchCP01_SG20
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   179
PWM (Da):   %s   19701.48 Transmb domain:   %s   o443-460i
PI (pH):   %s   5.04
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLKTFGFAF GREDIWHPEK DIYWGSEKEW LAKSGGENSR YSGQRDLENP LAAVMMGLIY VNPEGVDGNP DPLKTAQDMR VTFARMAMND EETVALTAGG HTVGKAHGNG KASNLGPDPE 
GAELHEQGLG WNNHTSRGIG RNTVTSGIEG AWTTHPTRWD NEYFYLLLSY EWQLTKSPA 

Retrieve as FASTA  
Remarks Partial sequence from genomic, identical to VchCP01_N16961, VchCP01_PG030 and VchCP01_AS238.