The peroxidases and oxidases database
Entry information : NtPrx10-1B (NTPXC8 / NtPrx10b)
Entry ID 3815
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2006-08-28 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-02-18 (Christophe Dunand)
Peroxidase information: NtPrx10-1B (NTPXC8 / NtPrx10b)
Name (synonym) NtPrx10-1B (NTPXC8 / NtPrx10b)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue types Leaves
Trichomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx10-1B
start..stop		 S start..stop
NtPrx10-1A 657 0 1..330 1..330
StPrx28 569 0 1..330 1..331
CanPrx01 565 0 1..330 1..332
LePrx06 557 0 1..330 1..332
Literature and cross-references NtPrx10-1B (NTPXC8 / NtPrx10b)
Literature Kondo S. cDNA sequence encoding a peroxidase highly expressed in paraquat-tolerant tobacco callus
Protein ref. UniProtKB:   Q50LI2
mRNA ref. GenBank:   AB044153
EST ref. GenBank:   FG635192.1 [5' end]   AM802473.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.3689
Protein sequence: NtPrx10-1B (NTPXC8 / NtPrx10b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (301)
PWM (Da):   %s   35449 (32098.3) Transmb domain:   %s   i12-34o
PI (pH):   %s   8.22 (8.41) Peptide Signal:   %s   cut: 30 range:30-330
Sequence
Send to BLAST
Send to Peroxiscan
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MEYYHHSINK MAMFMVILVL AIDVTMVLGQ GTRVGFYSST CPRAESIVQS TVRAHFQSDP TVAPGILRMH FHDCFVLGCD GSILIEGSDA ERTAIPNRNL RGFDVIEDAK KQIEAICPGV  VSCADILALA ARDSVVATRG LTWSVPTGRR DGRVSRAADA GNLPAFFDSV DVQKQKFTAK GLNTQDLVAL TGAHTIGTAG CAVIRGRLFN FNSTGGPDPS IDATFLPQLQ ALCPQNGDAA 
RRVALDTGSA NNFDTSYFSN LRNGRGVLES DQKLWTDAST KVFVQRFLGI RGLLGLTFGV EFGRSMVKMS NIEVKTGTNG EIRKVCSAIN 

Retrieve as FASTA  
Remarks Complete sequence from cDNA and 9 ESTs (EB444600.1...). Unigene compiles ESTs from both alleles.
cDNA►
Send to BLAST
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GTGAGCCAGA GGACGAGACA AAACAAAATC ATTAAGTAAA GTACAAAAAA GAGTAGAAAT TTACTTACTC AAATCTCAGA ATTCGTTTAT ACTGTTAACA CGTACCATGG AGTACTATCA  CCATTCAATT AACAAAATGG CCATGTTTAT GGTTATTCTA GTGCTAGCCA TAGATGTGAC TATGGTTTTA GGCCAGGGTA CCCGTGTTGG ATTTTATTCC AGTACGTGCC CAAGGGCCGA  ATCCATAGTT CAATCAACGG TGAGGGCTCA TTTTCAGTCT GATCCAACGG TGGCACCAGG AATCCTGAGA ATGCACTTCC ATGATTGTTT TGTACTAGGT TGTGATGGTT CCATCCTCAT  TGAAGGTTCA GACGCTGAGA GAACTGCTAT CCCAAATAGA AACTTGAGAG GATTCGACGT TATTGAGGAT GCTAAGAAGC AAATTGAAGC TATCTGTCCT GGAGTTGTTT CCTGCGCTGA  CATTCTTGCT CTTGCTGCTC GTGATTCTGT TGTCGCGACT AGGGGACTGA CATGGTCTGT GCCCACGGGA CGTAGAGATG GGCGAGTTTC TAGAGCAGCT GATGCGGGTA ATCTGCCAGC  TTTTTTTGAT TCCGTGGATG TTCAAAAGCA AAAGTTTACT GCGAAGGGTC TCAACACTCA AGATCTTGTC GCTCTTACTG GTGCGCACAC TATTGGAACC GCAGGTTGCG CAGTCATTAG  AGGCAGGCTA TTCAATTTCA ACTCCACTGG CGGCCCTGAC CCTTCAATAG ATGCAACCTT TCTTCCTCAG CTTCAAGCAT TATGTCCACA AAATGGGGAC GCCGCAAGGC GTGTGGCACT  AGACACTGGA AGCGCAAACA ATTTCGACAC CTCGTATTTC TCCAACCTCA GGAATGGTCG TGGAGTTCTG GAATCAGACC AGAAGCTGTG GACCGATGCT TCTACAAAGG TGTTTGTCCA  AAGGTTCTTG AGTATTAGGG GATTGCTTGG GTTGACATTC GGCGTCGAGT TTGGCAGGTC CATGGTTAAA ATGAGCAATA TTGAGGTTAA GACTGGCACT AATGGTGAAA TTCGTAAAGT  TTGCTCTGCC ATCAACTAAT GCAGATATTG TACCCTTTTA TGTACTTGCT ACTCTTGTAC TTGGTTTATT TCAGTCAGCG CAAGCTGGAA AATCCAATTG TGTGGTAACC AATATCAATA 

Retrieve as FASTA