Entry information : PcLiP01_SC26 (rLDM / PcLiPA_SC26)
Entry ID 3854
Creation 2006-09-01 (Filippo Passardi)
Last sequence changes 2006-09-01 (Filippo Passardi)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2008-09-19 (Christophe Dunand)
Peroxidase information: PcLiP01_SC26 (rLDM / PcLiPA_SC26)
Name (synonym) PcLiP01_SC26 (rLDM / PcLiPA_SC26)
Class Lignin peroxidase     [Orthogroup: LiP001]*
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete chrysosporium    [TaxId: 5306 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcLiP01_SC26
start..stop
S start..stop
PcLiP01_RP78 702 0 1..345 28..372
PcLiP08_BKMF1767 695 0 1..345 28..372
PcLiP08_RP78 649 0 1..345 28..368
PcLiP07_RF78 636 0 1..345 28..372
Literature and cross-references PcLiP01_SC26 (rLDM / PcLiPA_SC26)
Literature Farell,R., Gelep,P., Anilionis,A., Javaherian,K., Maione,T.E., Rusche,J.R., Sadownick,B.A. and Jackson,J.A. Unpublished (19-APR-2005)
Protein ref. UniProtKB:   Q7LHY5
mRNA ref. GenBank:   X12698 [3' end]
Protein sequence: PcLiP01_SC26 (rLDM / PcLiPA_SC26)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345
PWM (Da):   %s   36632.85  
PI (pH):   %s   4.2
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RATCSNGKTV GDASCCAWFD VLDDIQQNLF HGGQCGAEAH ESIRLVFHDS IAISPAMEAQ GKFGGGGADG SIMIFDDIET AFHPNIGLDE IVKLQKPFVQ KHGVTPGDFI AFAGAVALSN  CPGAPQMNFF TGRAPATQPA PDGLVPEPFH TVDQIINRVN DAGEFDELEL VWMLSAHSVA AVNDVDPTVQ GLPFxSTPGI FDSQFFVETQ LRGTAFPGSG GNQGEVESPL PGEIRIQSDH 
TIARDSRTAC EWQSFVNNQS KLVDDFQFIF LALTQLGQDP NAMTDCSDVI PQSKPIPGNL PFSFFPAGKT IKDVEQACAE TPFPTLTTLP GPETSVQRIP PPPGA 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. Lacks 5'fragment. Strain="SC26 / NRRL 15978". An alternative sequence (UV-induced mutant) bears the extra C-terminal extension "XMIPYRIRLEPTVTVAG" (read-through stop codon), which has no homology to any LiP (NCBI CAB37300, SwissProt Q01785).