View Redoxidase 3943

Entry information : MtAPx02 (Medtr4g073410.1[4.0] / Medtr4g098670.1[3.0])

Entry ID	3943
Creation	2006-09-22 (Filippo Passardi)
Last sequence changes	2006-09-22 (Filippo Passardi)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2014-07-31 (Christophe Dunand)

Peroxidase information: MtAPx02 (Medtr4g073410.1[4.0] / Medtr4g098670.1[3.0])

Name (synonym)

MtAPx02 (Medtr4g073410.1[4.0] / Medtr4g098670.1[3.0])

Class

Ascorbate peroxidase [Orthogroup: APx2003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

Peroxisomal

Tissue types

Flowers
Glandular trichome
Leaves
Pods
Roots
Stems

Inducers

Drought
Phosphate starvation

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtAPx02 start..stop	S start..stop
LjAPx02	499	0	1..287	1..287
GmAPx03	493	5.64e-179	1..287	1..287
VuAPx02	493	6.51e-179	1..287	1..287
GmAPx04	488	5.52e-177	1..287	1..287

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	27800556..27800671	114	N° 2	27800791..27800915	123	N° 3	27801012..27801061	48	N° 4	27802619..27802684	64
N° 5	27802766..27802814	47	N° 6	27802996..27803078	81	N° 7	27803158..27803237	78	N° 8	27803421..27803523	101
N° 9	27804145..27804336	190
join(27800556..27800671,27800791..27800915,27801012..27801061,27802619..27802684 ,27802766..27802814,27802996..27803078,27803158..27803237,27803421..27803523,278 04145..27804336)

Literature and cross-references MtAPx02 (Medtr4g073410.1[4.0] / Medtr4g098670.1[3.0])

Literature	Shaull,S., Lin,S., Dixon,R., May,G., Sumner,L., Gonzales,B., Cook,D., Kim,D. and Roe,B.A. Direct Submission (19-APR-2006)
Protein ref.	UniProtKB_Uniparc: Q1T679
DNA ref.	Phytozome 12: chr4 (27800556..27804336)
Cluster/Prediction ref.	Phytozome Gene 12: 31106305 UniGene: Mtr.4466

Protein sequence: MtAPx02 (Medtr4g073410.1[4.0] / Medtr4g098670.1[3.0])

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	287
PWM (Da):	31586.16	Transmb domain:	o258-280i
PI (pH):	6.52

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAFPVVVDSEYLKEIEKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNASIRNEEEFSHGANNGLKKAIDFEEVKAKHPKISYADLYLAGVVAVEVTGGPTVNFVPGRRDSK
VCTRDGRLPDAKQGVSHLRDIFYRMGLTDKDIVALSGAHTGRAHPERSGFDGPWTEDPLKFDNSYFQILLEEDSAALLKLPTDRALLDDPEFRRYVELYADEDAFFRDYAESHKKLSELG
FAPSSKATAPVDATVLAQSAFGVVAAAAVVILGYLYETHKRGK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 4, 8 introns) and 45 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTTCCCGGTAGTAGTAGACTCAGAGTATCTCAAGGAAATCGAAAAAGCTCGTCGCGATCTCCGTGCTCTCATCGCCAACAGAAACTGTGCTCCCCTCATGCTTCGCTTAGCGCGT
AAGGGATTTCTCTTCATCTTCACTTTTCCTTGTTTTTTTTTTTTCTCTTCCGATTTCGGTTTCTTAACGATTTTTAATTTCACGGTCAACGCTTTCGATTTTGTTGATTTGATTCAGTTG
GCACGATGCGGGAACTTATGATGCAAAGACCAAGACCGGTGGACCTAATGCTTCTATTCGGAACGAGGAAGAGTTTTCTCATGGTGCTAATAATGGATTGAAGAAAGCTATTGATTTCTG
TGTGGTATATTATTACTATTCTATTCAATTTAATCAATTTCACTTTCAGTTTTTGTTGTTGTAAAACTAGTATCAATATCATTGGTTTCTTATGTCACAGAGGAAGTGAAGGCAAAACAT
CCTAAGATTTCATATGCTGACCTTTATCAGAGGTGATTATTTACCTTCACTCACTTGTTATGTAAATCTGCAATAAATCCAATAATTTTGTGTTCAAGTGGTTTTCTTAGAAATTGTAGA
ATGGGGTCAATGACTTTCAATTTTGTCTCCAGTGTGCAACATGATTTTTTGATTAGATAAATTTATTTATGTTATGTCTATTGTGGCGCTCCTATTTCTGCTACTTCCAATTTTCAACTT
AAATTGTCCTCTTTATACATTGTTTGTGACTCTGGACAGTCAAAACTCTGGGATTGCTGCTTTGTTTAGTTTTTTCATGCAGTGTTAGGTGGTATTAGTTTACCCAGTTCTTGTTTCTAT
TTTGAAACTGAATCTCATTGTTAGGTGGATTGTATGAATCTTGAAGTTACATACATAACATGCCCTTTGCTTACATTAGTGCTCTGTCCCATGATGCATGACAATTCCGAACTATAATAA
TTTAATATTACGATAACAAAGAGATTGACTAGCTTTGCTTAGTTAATCATCTCACTGCTTTGTTCTGTTTGTTTTTTCTATTCGCTTTTATGATTATGTGTTTTTTTTTCTTCTTCTTTC
TTTTCCTTGTGCTTGTTTACCTCTTTAAGAAATTGTCTTCTACCCAAAGACAAAAAAGGTTGATTGTTCTATTCAATCATCTACAGGCTTGGTTATCTTGCCTAAAGCTTTAATACTTTG
TGTGAGATTTCAAGGTTTTTAACAAAGTTGTCAAGGATTATATTATGCCTTGAATTAGGATAAGGTGGATTATTCTGTGATGAACCATTTGAAGGTGGAAAACTAACTTGTTTGCTCTAT
ACAAATTCCATTTTCTGAACTCTTTATTTGGTTAGTTCAGTTGTTTTATATGATTTGAGAGAAAATGCAGTTGTAATATATGAAGGTTACAACATCACCTTGTTCCCTTAAACAAATTTT
GGCAACATTCTGCCTCAATCATTTCAATGACACTGGTGACCAACTTCATACTACCCACAAGCCTTTCCTAGGCGAAAACGTGATGAAGAAAGAACTACATTTCTTGGTAGCTTTATGAAA
TCTGGAGTGATTACAGAAGTACACCTAAATTTTGATAGTTCAGAAATATATATAAGTGAAGCTCAAGTTCCTGTGTTGAGTTTCAAGTTTCATCATTTTAGCTTTTTACCTAGTGGAGGT
GTACTTCTTTTGTTTCTAGTAATTTACATGCATCCACTCTTAGTGGCGAATATCTCTACAAAGTTGAACGTCGATTGATTTTCATATACAGTAATTTTAAAAATTTGCAAGTTTTCCAAA
TTTACTTTTTGAAAATCGAAGATTCCCTTAATTACTGTATAAGTTTCTATCAAAATCAAGACAATTATTGGAGTTTCTTGCATATCACATATGAAGTGATTAAAACCGGTACATATTAAA
ATAGAGAGGAAGGGGGAGCATTATTTATCACTCGTGCAGGGCATGCCTTGTATAAAACAAGATATGCATTTGTTAGTGAAGAACTAAACCAGCTGCAACATAGATTACATGAATCTGAAA
CAACAATTATTTCTTTCCTGTGCTTCCAGCTTGCGGGTGTTGTTGCAGTTGAGGTTACTGGGGGTCCCACAGTCAACTTTGTTCCTGGAAGAAGGGGGTATGTTGTGCAATACCTTTCGT
TAGAATATTAGTTATGAAATCCTGAACTTGTCGTTCTCTAATTTTCTGTGTCATGTAGGATTCAAAAGTATGTACCAGAGACGGGCGACTTCCTGATGCTAAACAAGAGGTGTGTTACTA
AATTATTGTTAGTGTTACAACAGTTTTGTTCACTTGGGCATGGTAAATAGCTTACCATTGCCTGTGAAAAGATTTTCTTTTCTCTGAATTCCCTTCACATCAACAAAATTAAGAAATAAT
AATATTAAGACTTATATGAAAGCATGTAAACATGTCAATGCTATTGGTAGGTGTGTCGCATCTCCGTGATATCTTTTATCGTATGGGCTTGACTGACAAAGATATTGTTGCACTGTCTGG
GGCTCATACGCTGTGGTGATTCTCCTTTCTATATCTTTTTATTATTTGCTGTGATTGCGGCCATAAATTCTTATTTTATTTTCTGTGTTTCAAGGGAAGAGCACATCCAGAGAGATCAGG
GTTTGATGGCCCTTGGACAGAGGACCCTCTGAAGTTTGATAACTCATATTTTCACAGTAAGACTTATGTTTTGTGCATTATCATCAGTTTTTTTTGCTTTACTACAAGGACATTTGTAGA
TTTTCAGTTTTACATCCCAATATGACAAGAGTTTGATTTTTTCATTTTTTTTTTTAATTTTTATTTCGGATAAAGAGCTGGATTTTTTATTTACCGCTAAATTTCATTGTCAATATCAGG
ATACTTTTGGAAGAAGATTCCGCAGCTCTGCTTAAACTTCCAACAGACAGGGCTTTATTGGATGATCCTGAATTTCGCCGTTATGTTGAGCTGTATGCGAAGAGGTAATTGGGATTGTTT
AATTAAAATAACATAACATTTACATAATCCCTGGTGAAAACTGATTTCATAAAGTGTCCTGCCAAATATGGTTTTTCAATAGCATTTTATAAGTCCATTTGTAGTCTTGTTGCATTTGTT
TATTGGATCAATCTTTTGATTGGAACTCATTGCATTAAGTAGGTTGATTAGTAGGTCCTTCTTCCCGGTAAGCATTGTGCTTTGGAGTTTACTAATGCCATCTGCGATTATCACGATGTT
TCATAAGATTTCCTACATGTGCTAATTGGGTGGAAAAACCAACAGCTTTCTTACTTAATATGTGATAGATATGAGCTCTTTCTACGCGGCCAACTACTTAATATGTTGGTTTTGTTTTCC
TTCTGTTACAACTATTAAGGTTGAAGATCTACATTTAAACTAAATAACGTACTTATTAGATCATTTATATGGGACTAACCTACCCAAAACATTCATGCCAAGTTTCTGTTTTGCTCAAAA
ATCATTGAAGAAAATAAATAGTGGTTATTTGCGTCAAAGTTCTGAATTCTGTTGATCCATCATTAAATTAAATGAATCGTCTGCTGTTTCCTGTTTTTTCTTTCTTCTAATTCTCCCTCT
GGCAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCACATAAGAAACTTTCAGAGCTTGGCTTTGCGCCAAGCTCAAAGGCGACTGCTCCTGTGGATGCAACCGTACTGGCACAAA
GCGCTTTTGGAGTTGTAGCTGCCGCTGCAGTGGTGATCCTTGGTTACTTGTATGAAACTCACAAAAGAGGGAAGTAG

Retrieve as FASTA

CDS►
Send to BLAST