Entry information : SaAPx04
Entry ID 3958
Creation 2006-09-05 (Filippo Passardi)
Last sequence changes 2006-09-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaAPx04
Name SaAPx04
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaAPx04
start..stop
S start..stop
CroAPx01 464 7e-169 1..250 1..250
MguAPx04 460 4e-167 1..250 1..250
RgAPx01 454 1e-164 1..250 1..250
NtAPx03-1B 453 2e-164 1..250 1..250
Literature and cross-references SaAPx04
Literature Liang,L. and Lynn,D.G.

Cloning of genes for Striga asiatica haustorium formation by
suppressive subtractive hybridization (SSH)

Unpublished (03-APR-2006)
Protein ref. GenBank:   GER42008.1
Protein sequence: SaAPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27448.89  
PI (pH):   %s   6.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVKNYPAVSE EYLKATEKCK RQLRGFIAEK NCAPLMLRLA WHSAGTFEKN SKTGGPFGTM RFKAELGHAA NNGIDIAVKL LEPIKEKFPI LSYADFYQLA GGVAVEITGG PDVPFHPGRQ  DKEEPPLEGR LPDATKGCDH LRDVFVKQMG LNDQDIVALS GGHTLGRCHK ERSGFEGAWT SNPLIFDNSY FKELLSGEKE GLLQLASDKA LLSDPVFRPL VDKYAVDEDA FFADYAVAHM 
KLSELGFADA 

Retrieve as FASTA  
Remarks Uncorrect prediction of the last very short exon
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAAGA ACTATCCGGC TGTGAGTGAA GAGTATCTGA AGGCCACTGA GAAATGTAAG AGGCAGCTGA GGGGCTTCAT TGCCGAGAAA AATTGCGCTC CGCTCATGCT TCGGCTTGCG  TGGCACTCGG CTGGTACGTT TGAAAAGAAC AGCAAGACTG GAGGTCCATT TGGGACCATG AGATTCAAGG CTGAGCTAGG TCATGCTGCC AATAATGGCA TTGACATTGC TGTTAAGCTG  CTGGAGCCCA TAAAAGAGAA ATTCCCAATC CTATCATATG CTGATTTCTA TCAGTTGGCT GGTGGTGTTG CTGTTGAAAT AACGGGAGGA CCTGATGTTC CTTTCCATCC CGGAAGGCAG  GATAAGGAGG AGCCTCCGCT GGAAGGCCGC TTGCCTGATG CAACCAAAGG ATGTGACCAC TTGAGGGACG TTTTTGTCAA ACAAATGGGC CTGAACGATC AGGATATTGT AGCACTCTCT  GGTGGCCACA CTCTGGGAAG GTGCCACAAG GAGCGATCAG GATTTGAAGG AGCATGGACT TCTAACCCTC TCATATTTGA CAATTCTTAC TTTAAGGAGC TTCTGAGTGG AGAGAAAGAA  GGGCTTTTGC AATTGGCGTC AGACAAGGCA CTTCTTTCTG ACCCCGTTTT TCGTCCACTT GTCGACAAAT ACGCTGTGGA TGAGGATGCT TTCTTTGCTG ATTATGCGGT GGCTCACATG 
AAGCTCTCTG AGCTGGGATT TGCTGATGCT TAA 

Retrieve as FASTA