Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
130 |
PWM (Da): |
14194.31 |
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PI (pH):
| 7.78 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
WHSTGTYDCQ SRTGGPFRTM RFDAEQVNGA NYGIQIALRL LDPIR*HSLL SLLLIDFRDL SGAVAVEVTG GPKIHFHP*R EDKPHTPPEG RLPDATKGFD LLRDVFAKRM GLSDKDIVAL
SGSHTPISPS QS
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (chromo 1), 1 mRNA. Two frameshifts and two STOP codons in the sequence. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGGCACTCTA CTGGAACTTA CGATTGTCAG TCAAGAACTG GAGGTCCATT CAGAACAATG AGGTTTGATG CAGAGCAAGT TAATGGAGCC AACTATGGTA TTCAAATTGC TCTTAGGTTG
CTGGACCCCA TCAGGTAGCA TTCCCTACTA TCTCTCTTGC TGATTGATTT TAGATTTTTG AAAAGTTCTA ATTTGTTGAC GGTGATAACT TTAGGGTTTG GATTCTAACT TACAATGTCT
TTTTGGTGAG AAATTGATCT TTCAGGTGCT GTGGCCGTTG AAGTTACTGG TGGCCCTAAA ATTCATTTCC ACCCTTGAAG AGAGGTTAAT CATTCCTGAG AGTGTGTGTT CTGCTTTCTT
TGTTGACATG GCTGATTGAT AATTTAGACA TTCTCTCAAT ACTTGTAATA CTGAAACGCT GTGGGACTTG ATTGTCTGTT TCTAACATGC ATATCTTGCT TTCAGGACAA GCCCCATACA
CCTCCTGAGG GTCGTCTCCC TGATGCTACA AAAGGTTTTG ATCTGTTGAG AGATGTATTT GCTAAGCGGA TGGGCTTGTC TGACAAGGAC ATTGTCGCTT TATCTGGATC CCACACTCCT
ATTTCTCCAT CTCAGAGC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGGCACTCTA CTGGAACTTA CGATTGTCAG TCAAGAACTG GAGGTCCATT CAGAACAATG AGGTTTGATG CAGAGCAAGT TAATGGAGCC AACTATGGTA TTCAAATTGC TCTTAGGTTG
CTGGACCCCA TCAGGTAGCA TTCCCTACTA TCTCTCTTGC TGATTGATTT TAGAGATCTT TCAGGTGCTG TGGCCGTTGA AGTTACTGGT GGCCCTAAAA TTCATTTCCA CCCTTGAAGA
GAGGACAAGC CCCATACACC TCCTGAGGGT CGTCTCCCTG ATGCTACAAA AGGTTTTGAT CTGTTGAGAG ATGTATTTGC TAAGCGGATG GGCTTGTCTG ACAAGGACAT TGTCGCTTTA
TCTGGATCCC ACACTCCTAT TTCTCCATCT CAGAGC
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Retrieve as FASTA
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