Entry information : CloPrx01
Entry ID 3991
Creation 2006-09-21 (Filippo Passardi)
Last sequence changes 2006-09-21 (Filippo Passardi)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-04-30 (Christophe Dunand)
Peroxidase information: CloPrx01
Name CloPrx01
Class Class III peroxidase     [Orthogroup: Prx030]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Zingiberaceae Curcuma
Organism Curcuma longa    [TaxId: 136217 ]
Cellular localisation N/D
Tissue type Young leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CloPrx01
start..stop
S start..stop
ZoPrx01 643 0 6..317 1..312
NnPrx34 488 1.76e-175 21..317 33..328
VvPrx38 479 3.16e-172 21..317 31..327
NnPrx33 476 6.67e-171 21..317 32..332
Literature and cross-references CloPrx01
Literature Ma,X.Q., Koo,H.J., Haller,K.P., Soderlund,C.A. and Gang,D.R.

Comparative Analysis of Expressed Sequence Tags from Different
Organs of Ginger and Turmeric. Insights into Specialized Metabolism
in Traditional Medicinal Plants

Unpublished (2006)
EST ref. GenBank:   DY386189.1  DY386188.1 [3' end]
Protein sequence: CloPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (301)
PWM (Da):   %s   35165.64 (33436.7) Transmb domain:   %s   i13-35o50-67i
PI (pH):   %s   7.11 (6.85) Peptide Signal:   %s   cut: 17 range:17-317
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VFVILILACW SSPSRGEGVG LTLNFYSKSC PKAEEIVKQE VVKLYNEHGN TAVSWVRNLF HDCMVESCDA SLLLETAGTI LSEQSVDRSF GMRNFKYVNT IKEALERACP ATVSCADIVA  LSAREGVVML GGPFIPMKTG RRDSKQSHAD VTDKSIPNHN DSMSVVLSRF KSIGIDAERT VALLGAHSVG RVHCVNLVGR LYPTVDPTFD PEYAKYVLNR CPSPNPDPEA VLYSRNDRET 
PMIIDNMYYK NLLNHKGLLK VDQQLLSYPA TAQFVKLMAA DNSYFYSQFA KAMLLMSENN PLTGNEGEIR RDCRFVN 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. Lacks small part of PS. Cultivar="Orange Turmeric".
cDNA
Send to BLAST