View Redoxidase 4

Entry information : GmPrx02(Glyma.17G013600 / Glyma17g01720.1)

Entry ID	4
Creation	2006-09-15 (Christophe Dunand)
Last sequence changes	2006-09-15 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-02-27 (Christophe Dunand)

Peroxidase information: GmPrx02(Glyma.17G013600 / Glyma17g01720.1)

Name

GmPrx02(Glyma.17G013600 / Glyma17g01720.1)

Class

Class III peroxidase [Orthogroup: Prx012]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx02 start..stop	S start..stop
GmPrx35	650	0	1..330	1..334
PvPrx11	647	0	1..331	1..335
VuPrx01	647	0	1..331	1..334
PcoPrx03	630	0	14..331	14..333

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4' 'join(1041036..1041257,1041355..1041543,1041800..1041965,1042371..1042789)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1041036..1041257	220	N° 2	1041355..1041543	187	N° 3	1041800..1041965	164	N° 4	1042371..1042789	417
join(1041036..1041257,1041355..1041543,1041800..1041965,1042371..1042789)

Literature and cross-references GmPrx02(Glyma.17G013600 / Glyma17g01720.1)

Literature	Gijzen,M., Miller,S.S., Bowman,L.A., Batchelor,A.K., Boutilier,K. and Miki,B.L. Localization of peroxidase mRNAs in soybean seeds by in situ hybridization Plant Mol. Biol. 41 (1), 57-63 (1999).
Protein ref.	UniProtKB: O64970
DNA ref.	Phytozome 12: Gm17 (1041036..1042789)
Cluster/Prediction ref.	UniGene: Gma.30988

Protein sequence: GmPrx02(Glyma.17G013600 / Glyma17g01720.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (307)
PWM (Da):	37084.16 (34578.8)
PI (pH):	8.68 (8.55)	Peptide Signal:	cut: 25 range:25-331

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPKGLIFLAVLCFSALSLSRCLAEDNGLVMNFYKESCPQAEDII
KEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDTPGVVALLGA
HSVGRTHCVKLVHRLYPEIDPALNPDHVPHILKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTK
GEIRKQCNAANKHHEEP

Retrieve as FASTA

Remarks

Complete sequence from genomic and 257 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AGCCATCAAG TTTTCTTCAA GGTGATACTG GCATGAAAAA AAAAAGTAAA ATATTTTCGT ATCATCTATC ACTTTTTTTA TTTTAAAACA TTTAACATTT TGATAAAAAT AAAAACATTT ATTATTTTTA AAAAATATTA ATTATTTTAC TAATATGCTC AACTAATAAT ATATTATCTA AATATTTAAC TAATTCACAA CTATATTTAA CTATTTTAAT AAAAATAATC TTTAACCCAC TTTTTATTAT TAACTAAAAT TTAGCCTTTC AAAAAATTAT TAATTAAAAT ATATTAAAAA CTATAAAATT ATATAATTCT CACTCCAACG GTCCTACTTA ATAAACTCTC TTTATAATTT TTAATAAATA TTAACTAATA AAAACATATT GTGTTAAATA ATGTTTCACT AACACTCCTC TGCATCGTGT TGCTTCCAAC TTTAATACTT TAATTAATTA TACAAAACAA TTCAAAGGAA AGACGCGACA TTGACCATTG AATAGAGTGA TGGACGTACA CTTTTTTGTT TTATAGCATA GCATTTTTAA ATGGTTGATG CCCATACTTT TTTCCATTGG GATTAAAGTT TGGGAGGTGG CGGTAAATTC TTTCCATCTG CACGTCGAAA GCATTTGGGA TTGTGCTCAT ATTGTTTTTA ACAAGTGGGG TTGTCCTCAT ATTATAACTT CTTTTTTTTT AACTATATTT TAAGCGGAAG AAAAAAATAT TGTGGGGAGA GCTACCCCAA AACTTCTAAT GTAGATCCGT TTCTAAATGT ATAATATTGG TTTATGTGAC AATATTTTTC TTTTTTTGTG TGTGGTAAGC ATGGTGTTGT ACTATATCAT AATTACACAA ATATACTTTA ATATTAATTT TTTGTTATAT TTCAAAAAGG ATAAACGTAT AATCTATCTC AAATTATACA AGTAATCATT CAATTATTAA AAATCACACT ACATAGTTTC CTAAGAATTT TCAAATTAGT TCGTGACCAT TAGTAAAATA TATTAATGTG AAAATTAAAT CAATAAATAT TTAATATTTT AGAGACTATT TATATAATTT TATTACTTTA AAGGTTATTT AGAGAGAGAG TAATACTCTA AAATGGATGA TTTTATAGAA GAAGGATTTG GATTATTTTT ACAAACTCAA ATTAAGTTTA CGCATTTTAG TCCAAACGTG TACACCTCTG GTGGGAACTG GGAACTGGGA ACTGAGGAAA TGAAGGAAGG TTGAAAATGA CTTTCACAAG CCGCACTGTG CCAAGCCCCT TGAAATAGCT GACTTTCTCA GCTGGTGTTG CTCGTTTGCT TTGCCAAGTG CAAACAATTT TTGCCATTTC TCAATAAAAA AACATGGAAT CTATCCGAAA TCCTGAAATC TTTGTGCAAG TTCCGTTACT TACTACTCTT TTTTCTCTTA ACATTATACT TACTATTACT TATTTATATT TTTTTAATAT GTCAAATAAT ATGAAGTATT TGTACATTTT TATCCTATTA TGTTTATGTT TATAAATAAA ATAAAATTTT ATTATTAAAA AATATATTAA GAAATTAATA AAATATAATT AATTTAAAAT GAATTAACTG GTTGACGCAT GAAATTAGTT GGGCGACGTC AGAAACACTT CATATTTTCC GTGGCTTCTA CGCACCAGAG TCCAAAATTT AAAGTTTTGT AGCTGAAAAT AGGAAAAGAA AAGTTGCAAC GAATCCCGTA GCCTAGGCAC ATCACATGGT CAGTAATTAG TTTAATAAAT GCTAGCTCGT AGTGAGTGCT GGATCATGAT GAAAGCATCA ACATCACCCT TTAACCTAAA GTATTAAAAT GTTGGTTTAT TATTATTACT CATAGCTCAA AACCCAATTT TACCCTACCA ATTAAGGTCT CTCATACAGT AGTATTTTAT
TTGCACTACG TACTGGCTAC TTTATTTATT TAAGCAGAAG CAGGTGAGTG AGTGAGTGAG CAAGAGTGAA GAGCGAAGAG A

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCCAAGGGTTTAATCTTTTTGGCTGTGTTATGCTTCTCAGCACTGTCACTGAGTCGTTGTCTTGCGGAGGATAATGGACTTGTTATGAACTTCTACAAGGAATCATGCCCTCAG
GCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCCTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGGTAACTAAAACTTTGC
TTTTTTGTCAGTTAATTTTTTATATATGAAAGTATTTGTTCTTTACTCTTTTTTTTTGTGTGTGTGTGTGTGTGAGGGTAGAGTTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGG
AGCTTGTCTGAGAAGGAAACAGATAGAAGCTTTGGGTTGAGAAATTTCAGGTACATTGAGACCATCAAAGAAGCTTTGGAAAGGGAATGCCCAGGAGTTGTTTCCTGTGCTGATATCCTC
GTTCTCTCTGCCAGAGATGGCATTGTTTCGCGGTAATTTACTCCTTCTCTTCTGTTTCCCACTTTGCTCAACCTCACTCACTAGATCTGTCATTTGCTAGCACTTCTTTTTCGTATGTTC
ATCACCAAGTTCACTCTTGAAAGCTAAAGTTTATATACATATACCCTATCCATAATTCTAGCAAGATCGGTCTATTTTTAGTATAAGGAGATTTGTTTTGGCAACTGCTTTAATTCATTA
TTAAAGTGAGAATTTATTCTTGTAATTAATTTGATGTGTTGAATGCAGCTAGGAGGTCCCCATATCCCTCTTAAAACAGGAAGAAGGGATGGTAGAAGGAGCAGAGCCGATGTGGTAGAG
CAGTTCCTCCCAGACCACAATGAATCCATTTCTGCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACCCCCGGCGTAGTTGCATTGCTTGTGGTACTATACACTCTCCCCTAACCC
ATCCATCATCCATGTACATACATTCGTGAAATGACATCCTCTCATACACCACAAATTATTATATGATATGATCAATCATCTCAGCTGATCTCCACATAACATATAATTAAGTTACAGCAT
ACGTAATAATAATTTGTCTACATATATGTATTCATAAAGCATACATAAACTTTATGCATCACAATTCTTTTAATAAATATATGTGGGCCCCGCATGATTAATCAGAGAGATAAAGCCAGA
TGCAACTAGACAACATATATGAAAGATGCAACACCCTTATGTATGCATGGGTACATGACATGCTAAAAGAAAGTACACGTGGCATTGTTGCTTGTGATTTTATTTAAGTTTGAATAATGA
TTGAGATATTTTGTTGAACAGGAGCACACAGTGTTGGTCGAACCCATTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGATTGATCCAGCTCTGAACCCTGACCACGTCCCTCACATTC
TGAAGAAGTGCCCTGATGCCATTCCAGACCCTAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACCCCCATGATTCTAGACAACAATTACTACAGAAATATATTGGACAACAAGGGCT
TGTTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCCATTACTTTGCTCTCTG
AGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATGCTGCCAACAAGCACCATGAGGAGCCTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA