Entry information : Pt2CysPrx02 (POPTR_0006s22130 / Pt2CysPrxB / Potri.006G204900)
Entry ID 4032
Creation 2006-11-03 (Nicolas Rouhier)
Last sequence changes 2010-07-08 (Marie Brette (Scipio))
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: Pt2CysPrx02 (POPTR_0006s22130 / Pt2CysPrxB / Potri.006G204900)
Name (synonym) Pt2CysPrx02 (POPTR_0006s22130 / Pt2CysPrxB / Potri.006G204900)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Pt2CysPrx02
start..stop
S start..stop
Pt2CysPrx01 482 3.3e-175 1..263 1..269
Ptrem2CysPrx01 446 1.01e-161 38..263 1..226
Vv2CysPrx01 434 2.34e-156 1..263 1..273
Nt2CysPrx02-1A 425 1.02e-152 1..263 1..267
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4032' 'complement(join(22072772..22072888,22073053..22073166,22073743..22073868,22074707..22074786,22074883..22074964,22075320..22075394,22075543..22075740))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22075543..22075740 196 N° 2 22075320..22075394 73 N° 3 22074883..22074964 80 N° 4 22074707..22074786 78
N° 5 22073743..22073868 124 N° 6 22073053..22073166 112 N° 7 22072772..22072888 115  
complement(join(22072772..22072888,22073053..22073166,22073743..22073868,2207470 7..22074786,22074883..22074964,22075320..22075394,22075543..22075740))


exon

Literature and cross-references Pt2CysPrx02 (POPTR_0006s22130 / Pt2CysPrxB / Potri.006G204900)
Literature Gama et physiologia plantarum in press.
DNA ref. Phytozome 12:   Chr06 (22075740..22072772)
Omic ref. ePlant:   Potri.006G204900
Protein sequence: Pt2CysPrx02 (POPTR_0006s22130 / Pt2CysPrxB / Potri.006G204900)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   263
PWM (Da):   %s   28677.81  
PI (pH):   %s   8.04
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACSATSTSFISSIAAAKSMATPLSKTLTLPNSFSGTRKSIQSPVLRSISLTRGSHSAKSFVVKASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVVLFFYPLDFTFVCPTEI
TAFSDRYEEFKQINTEVLGVSVDS
FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGVALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAG
WKPGDKSMKPDPRQSKDYFAAL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and 7 ESTs (DT495540, DT479533, DT484010, DT480697, DT478918, DT497101, DT490852). Found mixed in the Unigen Pth.15098 (Pt2CysPrxA).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGCTCGGCAACTTCTACCTCTTTCATCTCCTCTATCGCCGCCGCCAAATCCATGGCCACTCCTCTCTCTAAAACCCTAACTCTCCCCAACTCCTTCTCTGGTACACGGAAATCT
ATCCAATCTCCCGTCCTCCGTTCCATTTCCCTGACCCGCGGCTCTCATTCTGCAAAGTCCTTCGTTGTCAAAGCCTCT
GTAAGTTCAAACATAAATAAATAATTCAGATTGGATCGATGA
TTTTTATGCCTTCAATTTGCGTTTCTATAGTAATTCTTTGTAAATGCTTCTCTTGTGTTTGATAATTAGTCTCTAACTAGGTTTGCTTTCGTTTTCATCTGTGTAGAGAGTGAACTTCCA
TTGGTTGGAAACGTAGCACCGGATTTCGAGGCTGAGGCTGTTTTCGATCAAGAGTTTATTAAG
GTAGTTTGTGCTTACAATGCTGTTGAATATAAGGAGTTATTTTCATTCCTTTTTTAA
CCGACTTTTTTAATTAAATTTCTTAATGTACATTGAAGTATTGTTTGGTGAAATTTGGACTTGAAAAAACAGTTAATTGCTGCTTTGATCGTTGTAAAATCTTAACTGGTTAATTGTTAA
CTTGATTAACGATGATAATGTGTCAATCAAGCTAGTTGAGATATGTTTTATTCAGGTTTCTTTGTGAAAATTGTATTCTTTTAATGAATGTGAATTGATTTTGTTACCACCTTGCAATTG
CGGTCATGTTTTGTTGTTTATTTTAAACTCTAGTTTGATTTGGTAATTTTGGTTTCAGGTGTTAAACTATCTGAATATATCGGGAAGAAATACGTGGTTCTATTTTTCTATCCATTGGAC
TTCACATTTGTTTGTCCCACAG
GTTTGTTTTGAACTCAGCAAATGTAATTTGAAGTTTCAATGAGTTGTGGATGCTAATTGTTCTTCAAATTTTTTTTTTTGACCCACTTGTGTGCAGAA

AAATCACTGCTTTTAGTGACCGTTATGAGGAATTCAAGCAGATAAACACAGAAGTATTGGGTGTTTCAGTTGACAGTGTG
GTATGTTCTTTTGTTTTTTGAAAATCAAGAAACAAAATCC
TAGGAGTTGTATGACTCCGGCCTGAAACTTTGGTGGTTTTTAAGTCTTCACTTGAAGTTTTCAACTTTATTTGATGATCTGGCTCTCACACAACACACGCATTTAGATAATGTCTCTAGA
TAATCTCATTGGAAACTTTTGTTTCTGTGAGGTGGGGGGAAGGATTCTTGTAGCCAACCTAAGCTTGCTTGGATTAAAGCTTGGTTGCGGTGATTTTGCATGTATGTATATATGTATTAG
TTTCCTTAACAGAAATAATGCGGGCCTTGCTTGCTAGAACAACTGAGAAAATTGCATGGCCTTTGCGTGTATTTTGAAACTGTATGACTCAAATCACAGCATTCTGTGTTGCTCAGCTGA
AGTGAATATTGTGATGGACAAAACTTGGACTTGGTTGAAGAAGAAAATAGGAACTGATAATTAGTGTAAAGAATCTCAATTTTGGTTCCTGTCATAAATCTATTGAATTTGGCTGTAGAA
GTTATAATCTTCATATAATGCAATTGCAACCTTTTTGGTAGCAAGTTAGGTCATTACTGCTCAGTGGCTACTATTCCATAAGCTTTTGTCTGTTCTAGTAATACATAAACATTTGCGTTA
ATAACTGGAATTGTTTATTGATATTGATTACAGCTGATTTTCTGGACAAAATTAGCTTCTAAGTTTGTTTATTGATATTGATCACAGCGAATGGAAGTATCCACTATCCATTTGCTGTAT
CACAGCTGATTTTGGTCTTGGACTAAAAATCAGAAATTGTTTATTGATATTGATTATGTCATGATACTCTTTGTGCAGTTTTCTCGCACCTTGCCTGGGTCCAAACAGATAGAAAGTCTG
GTGGGCTTGGAGATTTGAAGTATCCTTTGATTTCTGATGTCACCAAATCCATTTCAAAATCTTATGGAGTGTTAATCCCTGATCAG
GTATGAGGAGCTCTTTTTTTTTTTTTTATTGTCA
TTCTAAAAGAACACAATAATCCCCTTCGATTCTTTTAATGTGTGTACATGCACACATCCATGCATTAGTTGTCTTCTATTTATTACTGGCATGAATCAGTATGAAGCTAAACTATTGTGA
CTTAGGTCTAATGCACATTTAGTTCTCTATTGAACGGGAATCAGACTGTCTTGTTCATTCTCTTAGTGGTCCTATGGATCCTGAAGTTAATGCAGTGCGTAACTACATGCATGTACATGC
ACACATCCATGCATTAGTTGTCTTCTGTTTATTACTGGCACGATTCAGTACGAAGCTAAACTATTGTGACATAGGTCTCATGCACATTTAGTTCTCTAATGAATATTGAATGGGAATCAG
ACTGTCTTGTTCATTCTCGTAGTGGTCCTATGGATCCTGAAGTCAATGCCCATTGTCTGATAATGTTGGGAAAAGGGTTCTCATATTAAACACCATGGCCACTCAGCCTCTGCACGCCGC
TTGGAGGAGGAGCCCTGGCCTCTGCATTCCTTTTATTTATTTAGTTATGGTTTTAATTTCAGGGGGAGTTGCTCTGAGAGGACTTTTTATCATTGATAAAGAAGGAGTCATCCAACACTC
CACCATTAACAACCTTGCCATTGGGCGTAGTGTTGACGAGACAAAGAGAACACTCCAG
GTGATTTCACAAATACAGGGCAACAATATTCTAAAATCAGAAGATTTTGTAAATTAAGACTT
GGTTTTATTGTAGATCTAAAGTGCCTTTGGGCATGCATATGTTCTCCTTCCATTCTGATTGATTTCTGTTTAATCGTTTTTTGCTTTTGCATTTTCGTGCAGGCGCCTTGCAGTATGTGC
AAGAAAATCCAGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGACAAGTCCATGAAACCTGACCCAAGACAGAGCAAGGATTACTTTGCCGCATTGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGCTCGGCAACTTCTACCTCTTTCATCTCCTCTATCGCCGCCGCCAAATCCATGGCCACTCCTCTCTCTAAAACCCTAACTCTCCCCAACTCCTTCTCTGGTACACGGAAATCT
ATCCAATCTCCCGTCCTCCGTTCCATTTCCCTGACCCGCGGCTCTCATTCTGCAAAGTCCTTCGTTGTCAAAGCCTCT
AGTGAACTTCCATTGGTTGGAAACGTAGCACCGGATTTCGAG
GCTGAGGCTGTTTTCGATCAAGAGTTTATTAAG
GTTAAACTATCTGAATATATCGGGAAGAAATACGTGGTTCTATTTTTCTATCCATTGGACTTCACATTTGTTTGTCCCACAGAAATC
ACTGCTTTTAGTGACCGTTATGAGGAATTCAAGCAGATAAACACAGAAGTATTGGGTGTTTCAGTTGACAGTGTG
TTCTCGCACCTTGCCTGGGTCCAAACAGATAGAAAGTCTGGTGGG
CTTGGAGATTTGAAGTATCCTTTGATTTCTGATGTCACCAAATCCATTTCAAAATCTTATGGAGTGTTAATCCCTGATCAG
GGAGTTGCTCTGAGAGGACTTTTTATCATTGATAAAGAA
GGAGTCATCCAACACTCCACCATTAACAACCTTGCCATTGGGCGTAGTGTTGACGAGACAAAGAGAACACTCCAG
GCCTTGCAGTATGTGCAAGAAAATCCAGATGAAGTTTGCCCAGCT
GGGTGGAAGCCTGGTGACAAGTCCATGAAACCTGACCCAAGACAGAGCAAGGATTACTTTGCCGCATTGTAG

Retrieve as FASTA