Entry information : MauLPO
Entry ID 4045
Creation 2006-11-03 (Christophe Dunand)
Last sequence changes 2016-01-19 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-19 (Christophe Dunand)
Peroxidase information: MauLPO
Name MauLPO
Class Lactoperoxidase    [Orthogroup: LPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Cricetidae Mesocricetus
Organism Mesocricetus auratus (Golden hamster)    [TaxId: 10036 ]
Cellular localisation Secreted
Tissue type Lacrimal gland
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MauLPO
start..stop
S start..stop
MmLPO 1274 0 1..710 1..710
RnoLPO 1217 0 1..710 1..709
PpyLPO 1212 0 1..709 1..711
HsLPO 1211 0 1..709 1..711
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..76 76 N° 2 1088..1169 82 N° 3 3821..3981 161 N° 4 4488..4605 118
N° 5 4905..5034 130 N° 6 5685..5891 207 N° 7 7086..7410 325 N° 8 7878..8038 161
N° 9 11097..11349 253 N° 10 12152..12325 174 N° 11 13444..13681 238 N° 12 13874..14081 208
join(1..76,1088..1169,3821..3981,4488..4605,4905..5034,5685..5891,7086..7410,787 8..8038,11097..11349,12152..12325,13444..13681,13874..14081)


exon

Literature and cross-references MauLPO
Literature Lowe,T.M. and Eddy,S.R. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25 (5), 955-964 (1997)
Protein ref. GenBank:   AAM15535.1 UniProtKB:   Q8R481
DNA ref. GenBank:   NW_004801661.1 (1..14081)
mRNA ref. GenBank:   AF498045.1
Protein sequence: MauLPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   710 (688)
PWM (Da):   %s   80039.95 (77705.6)  
PI (pH):   %s   8.37 (8.17) Peptide Signal:   %s   cut: 23 range:23-710
Sequence 751
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKVLLRLPALLASLTLLQMAASTRNATRTATIRETVDEVKVQVNKAFLDSRDRLKTDMSNLAPTVRHLSGYLKQAKGRTRTAIRVGQVWEQSLKRLRRMVPLTNVTGQGLDLTSLSWEVGCGHPAPTVTCNISNPYRTITGDCNNRKNPELGSANRALARWLPAEYEDGLSLPFGWTPGKTRNGFPLPQPRDVSNQVLDYLNEEEILDQNRSLLFMQWGQIVDHDLDFAPETEMGSDNYSKAQCDELCIQGDNCFPIMFPKGDPKLKTQGKCLPFFRAGFVCPTSPYQSLAREQINALTSFMDASMVYGSEPSLANRLRNLSSPLGLMAVNEEVSDHGRPLLPFVNVKPSPCEVINRTAGVPCFLAGDSRASEQILLATSHTLFLREHNRLARELSRLNPQWDGEKLYQEARRIMGALIQIITFRDYLPILLGDELQKWIPPYQGYKETVDPRISNVFTFAFRFGHLEVPSTVSRLDENYQPWGSEPELPLHKLFFNTWRVVKDGGIDPLVRGLLAKKAKLAHQDKMMTGELRNMLFQPNHTVHGFDLAAINIQRCRDHGQPGYNSWRAFCGLSQPKTLEELSAVLRNEVLAKKLMDLYGTPDNIDIWLGAIAEPLVRRGRVGPLLTCLLGQQFQRIRDGDRFWWENPGVFTEKQRDSLQKMSFSRLVCDNTGINKVPLNPFQPNSYPHSFVDCSAIEKLDLTPWASVKK

Retrieve as FASTA  
Remarks Complete sequence from whole genome shotgun.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAAAGTCCTTCTGCGCCTCCCAGCCCTCCTGGCTTCCCTGACCTTGCTCCAGATGGCAGCATCTACCAGAAACGGTAAGTGCCATACTGTATTCACTTCTTGGAATAAGGCTGGGACAA
AAGCACTAGAAGCTGTGTGGCTGGGGACAATATAGGTTTAGTCACACACCCAGAAGGCTAGAGATCCAAGGTGAAGGTAATGGAAGCGCCATGTTCCTCCCGAAGGCTCTAAGGGGCTCC
CTTGTCTGTTCCAGCTTCTGATGGCTCCAGACATCTTCAGTTTCCTTGGCTTGTAACCCTGTCTCTATGTGTCCTCTCTGTGTATCTTTTCCCACCATTCACTGAACTTTGGGTTCACGA
TCATTAGCATGACCTCATCTGAATTAATCATATCTGTAGAGACTATTTGGAAATAAGGTCACACGCTGAACCTTCCAACCAGACACAGTTTAACCCACGGTACTCTCCTTGAAGGGAATA
GATGCTGCCTCTTGTACTCCATACCCCAACCTGAGGCGATCAAGGAGCACATCTTTCCTTTAGTATCCTCACGTTCCTTGCTCCAGCGTCCTGGCTATTGGGTAAATTCTGAGAGGCTTG
CTTAAGGACCCACAAGACCATCTCACCAGAAACCAGGAAGCCCAAGCTGAGTGGTCACACTGGACATCCTCTTCCTGGGCACTCCCAGGAATTTTGACATCTTGCTGAAGAGCAGACTGG
ACTCTTCCCACTCTGTGTCTCCTTCTTTTAAGGATATTGTTCTCAATCTGCAAGTCAAGACCCCTTTGAGGGGTTGAATGACCCTTTCCCAAGTGTCACCTAAGACCATGGGAAATATCA
GATATTGACATTATGATTCATAAACAATATCAAAATTACAGTCATGAAGTAGCACTGAAAATAATTTTATGGCTGGGAAGTCATTAGGGAGGTTGATAACCACTGTTTTAGGGAGCCTTG
GAAAGTGTCCTTAGTTCCCTACCTGCACTGGTTTGAGATATAAGATGATGGCTGAGAGGAAAGCAGAAGTAAGGGGAACTCAGGAGTGATACGTGATATCCTGCTTCCTACTTTTGCCTC
CCCAAGCTACAAGAACTGCCACCATCCGTGAAACAGTGGATGAGGTCAAGGTCCAGGTCAACAAGGCCTTCCTGGATTCCCGGGACAGGTAAGTGAGACATGCAGACATGTGTGTGAACT
CCCTTTCCAGGCGACTGACAAGTGCACCTAGACCAGCCCCAACAAGCCAGGGAGCCAAAGGAATTATAAAACTTGCCCTTCCACCTCCACCCCCACCACGTAGGTAGCAAATAGGAACAA
CAGCTTCCAAGTCCCCAAATCCCAGCTTCTAATGGTCTTGAGAGGACACCCAGTGAAACTCCAAAAGGACTTCCCTCCTTGTGGCCCCGGGTTTCCTTTGATTATGCCTGCCAGACTCAG
GAAGTTTTTAATTTAACTAATGTACTTGGGTCAGGCGCTCCAGAAACAGAACCACAAGCACGGAGTCCGTGCAGGTAGTTTACCAGAGATGTGTCCTTGAGGAAGTTGCCACATAATACA
AATTTAAATGAGGACACAGTTTGCAGTGTGGCCTCAACCTGGCCAACCCGCCACCACCCAGAGAGACCTAGAGTGTATGGTGTACTGTGGAGTCTGCCCCACCTTGGAGCAAGAGGGTAT
AGCTTTCACATACCCACATAAGGCTGATGTGGCCCAGACTTGGGGCTCCAATGGCAAGAGTTAAGTATGCTGGTGCTGTTACTGGGAACCGCTAACCAGGCAGCCACAAGGGCTCAGGAG
CAAGTGTCTAATGAGGCTGCAGCAGTGATCCTTTGGGGGCTGCACCCACAGCAGCTGGACAAACCCTCCTGATGGATCTGAGGCACCTGAGCAGCAGATCAAACCACCATCTACCCTGTG
AAGGGGCTGGAGCTCATGAAACCAGCAATTCGGACCAGTTCCTTCCCTCAGGAAGTCTACCTTCCACCAGTAAGGGGCAAAGAGAGCTGCGGATGTAGCTCAGTGCCACAGTGACAGAGT
CCTAGCCAAGCAAGTGCAAAGCTGTGGGTTCAATCCCCAGTCGGGGTGGGGGGAGGGAGGATGGCCATAGCAGTGCGTAGAAGACGTCTTCAATCCTTCATAGTTCTGTCTCTCAGCCTC
ATCGCTGGGTGAGCTCTCTAGTCCATGATTTTTGTGGGTGACTTTTAGATTGCTTTTAGTCCCCAGGAACTGTGTCATTTCACAAGTTCAAAGGTCAGCCTAAGGAGTTGGCTTCCTTGA
CTCTGAAGTGCTTGGGCTCTGCGGTGACAAGAGGGAGCCCAGAGGTCCTCTCCCTTGTTCAGGACTCCCCCCACCCACTGTCCTTGGGGGCTGAGTGGAGAGAGGAGCAGGGAAGCCAGG
GATGACAAATCCACTAGTCCTGAACATCTCAGTGGCTTAGTAGGGCCTCTCTTTGGGTACTTTTCTGAGTGTGTAAAGAAATCTGTTATCAACTCAAAGACCTGGAAAGTTCTCTGGCCT
GCACTGAGAGCTCCGAACCTGTGCTTGGGGCATCTGGCTTTAGACCTGACCCCACCCCCTCTGGGCTACAGAGCTACACTGTCTCATAAAAACAGAAAAAGGATGTGCATGGTATTGTGT
GACTTTAATCCAGGCACCCAAGAGGCAGAGGCAGGCAGACCTCTGTAAGTTTGAGGCCAGCCTGGTCTACATATTGAATTCCAGGCTAGCCAGAGCTGTTGCATGATAAAATCTTGCGGG
TTTTTTGTTTGTTTTGGATTGGTTTGGGGGGGTTAGTTTGTTTTGGGGGTTGTTTGTGTTTTGTTTTGTTTTTTCAAGACAGGGTTTTTCTGTATAACAGCCCTGGCTGTCCTGGGACTT
GCTTTGTAGAGCAGGCTGAGTTCTGGGGTTAAAGGTGTTGCCACCTTTAAAGGCAGCGTGGCTCTTTGTAGGGAGGTTAGGCTAGGGCTGGCCCTCCTTTGCCTTTCTTCTCATCTCATT
CGGCCCTTGGGATAAGCCATGACACCCACAGCACTTTAAACGAAGCTAATGGCCTAATATGAAGAGACAAGACAGGCATTGTAGCCAGTGAGTTAAACATAACCAGAAGACTGGTTTTGT
GAAAACCTGAGCCATTTTCAATATTTCAGAGCCTTAGAGACAAGGGCCTCATAGAGAGATCTCACACACTAGGAAACTGAGGAACAGTGAGGCAGGAGGATCTTTAAGTCCCTAGCCTCT
CTGAATTGCCATAGACTTCACAGTGGAAGGCCTTGAGGACTCTTGTTTTGCACGTGGAAGATAAAGCGCTAAGACTGAGCTTCCCTGAGACGGTTGACATGAGGTTGGGTGCTTCTGGGC
ACAGACTCTACACTAGCTCTAGGGTCAGATGCTTGAGCAGAAATGGAGGCCCATTCATGTCCCGGTCCTAAAATTCTTAGGTTATGAGGCTCAGCAGTGTAGCAGGAGTTCTCAAGTCTA
GATTCATCTGTTGCAGGACTTGGGTGGTCTTAAGATAACCAGTTAGTTCTGACACAGCCATCCAGGTACAATCTTTTGATTTTGGGGCTCTTTTGATCCATCCACCGGCTTTACGTAAGG
TCAGACTTAGCTATGCTTCATAGCCACAGTGGTTTCCTTCTCCCCAAAGAGGTTTTTCCAGCAGCACCAGACGAGACAAGGGGGAGATGCTGAGAGCCCATGTTTCCTTCTCAGAAACCC
TGTGTCTCCCCCGTTCACACACTCCCTTGCCCCTCTCCTGTGAGCTACCGACAAACTTCCGCAGAGTCAACTCATGAGCCCCACTGGTTCCTGCCGCAGGCTGAAGACTGACATGAGCAA
CCTGGCTCCTACCGTCCGTCACCTCTCAGGGTACCTCAAGCAAGCCAAAGGCCGGACACGCACAGCCATCCGCGTCGGGCAGGTGTGGGAGCAGTCTCTAAAAAGACTGAGGAGGATGGT
GCCCTTGACCAATGTCACAG
GTACAGACAGTTCACTAGCCCTCTAATGACAGGGAGGGACCATGAGTACAGACAGAGCCCACCAAAAGCTGCTAGGGACTATCTCCACCAAGAGGCGTGT
CTGTCTTCCTTCTTAGTTAAACCCAAAGGCCACACTGGCAGAGCTCAGAGGGCCTTCAGGGACAGCTAAGCCAATGTCCCTTTTGCAGATGAAAGAACTCGTGACAAGGTTATAATGTCA
ACTGATAGAGAAGGAACATTTGTGCTCAGTGTGTTGTGACAGTTTGTAAGTGACTGCCTGGAGGAAATGCCAAAGTCAATAAACAGGGTTTCTGGCCCCAGACCAGGGTCCTCACTACTG
CAGATGGAGAGGAGCTGTAAGCCACCAGTGTCATATGAGATTGCTCTCACGAGGTGAAACTTCTAGCCTGTTCTGGGGAACACTGAACTGTCACCTCTAGTCTGACCCCCTGCCTGTTGG
CAGTGTCTCAGAACTCCGCCCTGTTTGGGTTTCTCTTCTGTTTCAGGCCAAGGCCTGGACTTGACTTCGCTCTCTTGGGAAGTGGGCTGTGGTCACCCGGCTCCGACAGTGACTTGCAAC
ATAAGCAACCCTTACCGGACCATCACTGGAGACTGTAACAACAG
GTGACCCTACCAGCCACCACTCCAGCAAGCATCTCTGCCCCTTGGGCTTTGCAGGCACAACTACTGGATCCCTTTA
AAGATCCCTCATCTCCAGTGAGGTCACTGTGACCCACTGGGAGCGGCCCTTTCCATCGAGCAGACAGTCCCATGTCCTGGGCTTGGGAAAATGCAGACCCCCACAGGGCCCCTCCTCCGC
ATCCTCTTTCCCTCCTGCAGAGCTCAGGTTAAGGGTACCAGGGTGAAGGCAGGGTACCATGAGGTCACCTGCCAAAGCTCAGAGCTGTCTTGCTGGGTTTCAGGAAGAATCCAGAGCTGG
GATCCGCCAACAGGGCGCTGGCTCGATGGCTGCCCGCAGAGTATGAAGACGGGCTCTCCCTCCCCTTCGGGTGGACGCCAGGGAAGACGCGGAACGGCTTCCCTCTACCGCAG
GTGAAGA
AGGGCGGGGCACAGGATGGGAGGCAAGGAACCACACACAAGACACAGCACCCAAAAAGGAAAAGGGGAGGCGCAACTCAAATTAGGACTTGCACCCTAGCGATATGTTCCCCGAACCGCC
ACGAGAGGGCGGCAGAGCCCGGGGCCCAGCCAGGTGGTGGCGGTAATGTCCCAACTGTCACAGGCCTGATACCCTGGGGTCTCCCAGGCAGATGGTTTCCTCTCTCTATTCTACTTGCGC
CTATCCTGCCCCAGCCCCTGGAGTGCACCAGCTGTCGTTTTACTGCAGGTCTGATCTGTTGCCCTCATCTGAGCTGGCAGTCCCTCCCCAGGGTCCTTCTTCCCATGCCCAGAAACCTGG
CACGTCTGTCACAGGCATGTCAGCATCAGCCTGCCTTGGCTTTCTCTCTCCATAGTAAGGACGTTTGACCATTGTCCAGTCACACAGACGTAGGTTCAATCCCATCCTACCCCTTTGTAG
CTGCATTGACTCCCCTCTCTAAGGCCGGGTCCTCATCTACAAAGTTACCATTCACCCCTCCTCGTTGGGGATTGCATTGTAGATTCCCTAACAATCTGTGGTAGGATCTGACGCCGCAAA
GCATGCTTTCCTCCAGCCTGACTCCCCTCCTCTCTACCTGCAGCCCCGTGACGTCTCTAACCAGGTCCTTGACTATCTGAATGAGGAGGAAATTCTGGACCAAAACAGATCTCTGCTCTT
CATGCAGTGGGGTCAGATCGTGGACCACGATCTGGACTTTGCCCCTGAAACTGAGATGGGGAGCGACAACTACTCCAAAGCCCAGTGCGATGAACTCTGCATCCAGGGAGACAACTGCTT
TCCCATCATG
GTAGGCCTCTGCCTCCAGGTAGATGTCCCTGACGCCCCGTGCAGCTTCCAGTGTAGCACACACTTCCAGCCCAAAGATCAGGACCTCTTGATCCTGACGTCACAGCTCCC
CATCCACTCATAGGCTCATCCATCCACTCAGTAATCAGACAATAAGAACCTACTCTGCGCCAGGGAAAGGCGCAAGCACCAGGGATTCAACGGCAAGATACTGTGTTTGCGCTCAAGAGC
AGCAGGCTGGCATAGAAACGAGCACGCGAACTATTGACAGGATTAGGAAGTCTGAGCTCGTCTATATCACCCAGCAGCATCTAAGTCTCCGGGGGGATTTATTAGAAACCCAAAATCTCA
AGGCCCCACCCATGTTGGGAGATAGAATCTGACTTTTATCAAGACATATCCATCTGTCCCACCCACCCACCACCTTTCAGCCATGGGATTCATCCTATGCTTGGTTTATGGAAGTCTGCT
GCATGTTGCCCTTTCCCCGAAGGAGCTGGAAGCAGATTAGTGACTCAGTGAGCAGCAAGGATATGGAATGCCCAGCAGGAGAGGGATTTGCAATAGTCTCCTCGTCTTAACCATAGAGTT
TGCATTTACAGAGTTATTTGTTTACTCGACAACAAATCAAGACTGGGTTGTGGTGAAAAAAAAAAACACAAACAAACAAGCAAAACAAAAAAAAGAAAAAAACTGCACCATGAACTGAGG
CTGATCCAGACTTGAGTCTCACATTTTTCCCTCCTAGTTTGTGGGTGCTGAGGCAAGTTAATTTATTGACACTGTTTCTCATGTGTAAGAGACTCACAGGCTCTCTGGGGGACAGAATGA
GGTGAAGTATGCATCCAGGCTGGCACGTGGAATTCCATGGTTGCTATTTCAGGACTAATTACTAAGGCTCATGTCATACATTGCTTGCCTGTCTGGGGCTCTCAGGAAATCCTGCCATTT
CAGAGCTCTTGCTGTGAAAGAATGAATCATTATTTTCTGTTCTTGCACATCAGGGTATAATGAACTTTGGAGTGTTATGGGCCCAGGAAGTATAATGTCAGAAGGAGGCATCTAGGGCCA
GTGTCTGGCAAAAGTCCCACAAGAGTGCGTGAACATCTTTTCTACCAGACTGACCCTGGGGAGGGTGACCAGGGGACAGATGTTTGGTCCTCATGCAGTCATTTCCCAAACCATCTCTCT
ACAGTTTCCCAAGGGTGACCCTAAATTGAAGACTCAGGGGAAATGCCTGCCTTTCTTCAGAGCTGGATTTGTCTGCCCTACATCACCTTACCAATCCCTGGCCCGAGAACAAATCAATGC
TCTAACTTCTTTCATGGATGCTAGCATGGTGTATGGTTCTGAGCCAAGCCTGGCAAATCGACTTCGAAACCTCAGCAGCCCCCTGGGTCTCATGGCTGTCAATGAAGAGGTCTCAGATCA
CGGACGGCCCCTCCTGCCTTTTGTCAATGTGAAGCCCAGCCCCTGTGAGGTCATCAACAGAACGGCTGGCGTTCCCTGCTTCCTGGCAG
GTAAGTCGAGTCTGGGGAAAAAGAAAGGGGC
TAAGGGACAAAGGGATCATCCAAGGAAGCTTCTCCGTCCCAGCACCTTTCCAGGACAATGCCCCAAGCCTCCACTATCTGCAGCACTGAACAAGGAGTAGAGAAAGGGCCCAGATAAGTG
TTCACTGCAGAACAAAATAAGTCCAGAAAAAGACACAAAGAAAACCCACATATCCCCGTCATCCACCAAAGTTAGTCATTAGTATTTTCATATAAATCTTCCTTGTGTTCCTTGGGTATA
GTTCTAGCCCAGCTTGGTGGTACAGTTCCATAATCCCACCATGTCCCTCGTCTGTCGCTCTCCACCTGATTTCCTTTAGACTTCCTTGAAGGAGGGGCTTTGGAGAGAGTCCTGGGGGCT
CCATCTTTCTGTGTGCAGGTTCCTGTTCCTGGTCCCGCTTAGAAAGAACCCATCTTCCTGCCTTTTGGACTTTTAGGAGACTCCCGCGCCTCGGAGCAGATTTTGCTGGCCACATCCCAT
ACGCTGTTTCTCCGGGAGCACAACCGACTGGCCAGAGAGCTGAGCAGACTCAACCCCCAGTGGGATGGTGAGAAGCTCTATCAGGAAGCCAGGAGAATCATGGGAGCCCTCATACAG
GTA
CGGAGAAGGAGCACCTGCCACTCGGAGCCGCCTGCGCCAGCTCCCACCTCTGCTGTCTGTGCAGCAGCTCCAGCTGCCTGCTGTTCCCACACTCTTCCTCACTCCTTCCTCTCCTGCGCC
CCTCTCCAAGCACCTGATCAGCTCCCTGCTTTAAAACATACCCCACGTTCCGGATGTGGGGAGTCATCCATGTGTGGTCCTCCATGAGCCTGCCCCGTTCCCATCACTGCACCCACAGGT
TCTCTCACGATTGAGGCTCTTCCCTTGCAATGACTTCAGCTATTTTCATTTCTCTTCTTCTTGAATTCTCTCTCTGTAAGCTACATGCCATAGACATTCTTGAGTTTGGATTGCTTTATC
AACTAACTGAAAGAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTGGTTGGATTTTAAGATAGGGTCTCATTTAGCCCACACTG
ACTGTGACCTTCCGATACTCCAGCCTCTTCCTTCTGAGCTCTGAGCTCATGAGTGTTCAACATCGTATCTGGGCGCTAAGTAGATACGATCCCCAGGGTCTGCTGGAGGTTCTGTATTAG
CCTATTTTCTCCTGTTGTGTGGGTGACTAACTTCAGCTCATCTTTCCCATGTCTAGCCTCTGTTATTTCCACTCCACTGCTGAGTGGACTCAAGCTTATTATTCCTGTATTATTACTATT
ATTTCAAGTAGTGCATTTTCAATTCCATAATTTTGTTACTTTTTTACTTTTAAAACTTCTTTGCTGAGATGATTCCCTTTCCCACCGGTTTCAGGAAAACCTGTATTCTGATGAGGCATC
TTTAAGATGGTGACTTTAAAATCGTTATCAGCTGTAGGCAGGGCTGCATCTCAGTGGCAGAGTGCAGGCCTAGACAGTCAAGGCTCTGGGTTCAATCTGAAACACTGCAGCAAATAAATT
ACACACTATGTGTTTGTCCGCGTGCTTGGGGTATGCATATGTGTCTGGGGGTTTGCATGTACATATGTGTATGTGGAGGTCAGAGGTCAGACTCCCTCATGTGTCATTCCTTCAGAAAAC
TAAGCACATACTTTAGCTTGGAACTTACACAGTAGGCTAGGCTGGCCGGCCCACAAGCTGCAGGGATCTACCTGCCTCTGCCTCCCCAGCTCTGTGTTCTGGGGAGCAAAGCAGGTCTTT
GTGCTTGCAAAGCAAAGCGTTCTGCTGACTGGGCCATCTCCCCAGGGCTGCATAAACTCCTTATGAACTAACTCATCTGACTCCTGTCACTATTGGCATCAGTTGATGCATTTTCTCACT
CAAACTGCGGTTTTCCTGGCTCGAAGTATTACTGAACATTCCAGTGACTTTAATACTATCTGAATCTTTGCTCTAGCTTGTCTTTACCCTGCTGAGGTCTAGCACACAGGTTCTAGTCTG
CTTTTGTTTCCGTTCCAGTGACAGCTTGGTTCCAGGTCCTTCCAGTGCCCAATGGTCCTCTTCATTCTTCCAGTGCATATGAACTTCCCATTCCATTCCTGCTGGTGCTGATTCAGGGCT
CCAAAGTTGGTTTTTTCTGGCTCTCTGTTGTTGCTAAGCAACCTCCTATAGAAGCAGAAGCCACCATGCCTGGGTCTCCTTGGTGAGGAGCCAAGGGTGAGAGGAATCAGTGTTCCACTG
CCCCCCAGAAGGCTGAGATGGTCTGTCACCTGGACTGAGGAGCAGGGAAGCTTGGCTGGGCTCTGGAGGGCTTGTGTGTGAGGTAGGGGTTGGGGCTCTCTGCTAGTCTGCACAGGGTTT
CCCTGGCCCTTAGTCTCTGAAAAGAGCAGACATAACTTGGCTTCTTTCTGCATGTCTCTGTTAAGCTTCTGCAACCAGTCCTGTCTGGGGATAGAACTCACCACATGGTCATTCCTCAAA
TTCTGGGTTCCCCAGATAGTTCATATTCTTTTTCTAGCTTTCAGAGTATCTTCTTGAAGTTTTAACTTATGTGTATCTTTATGTAGTCCACAGGGGGTGTGAGGTCCCCTGGAGTTACAG
ATGGCTATGAACCTTCTGATGTGGGTGTTGGAACTGGACTCAGGTCCTCCAGGAGAGCAGCAAGTGCTCTTAAGCACGGAGCCTCTCTCCGGTCTCACTAGTCTCCTGTTGCACAGGCTG
ACCTCAGACTCCCTGTGTAGACAAAGCTGACCTCCAACTCCCAATCCTCATGCCTCACACCGCCAGCCCTGGGATTAGAGGTGTGTATCACCACAGCCATGTGGTATTGTTGCTGTCGTT
TTAGAGTTGTTTCTTTGAGTTGGAAATAGCAGTCTCACTCTGTAGACCAGGCTGGCCTCAAACTCACAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCTGACGTTAAAGGTGTGTGCTAC
CAACACCTGGCTGGCTAGGACTTCTTATTGGCTAGCTCTGTCTTACTTATTAACCCATTTCTATAAATATATATATATATATTTCCACGTGGTCTTGGCTTCCCAGAGAATGCCTGAACC
TGTTACTTTGGTGGCTACATGGTGTCTCTCCGAGGTCTATCTCTGCCTACCTTTCCCAGAATTCTCCTCGTCTCTTGATCCCACCTATCTTCCTGTCTCTATTGGCCAAACAGTGTTTCA
TTCATCAACCAATAAGAGAAACATATATCCAGAAGGGCATCCCCATCAGAGCGGGGAGGAAAATAAGGCTATACCACCCTGTTCTAAAACAAAAAGGCACTCATCTTATTTTTAATTATA
AGGGTGATCTATTTCCATATAAAATATTAGAGCCAGAAATCCTGTTGCTAAAGCACAGAGCATTAAATTGAAATGACCAGTTAGTATAACCAATGTGAAGACAATCATGAGAAATAGATG
AAAGGATGCCAGGATTGATTAGCAATGTCTGCCATGGTCATAGGAATGGAAACTGGTTACAAACGCTATCCATTTGCCACTCTCTTGGCAGCTGTTCCTCTATAGCCTCCCATTGCAGAG
AGGAGAGGTTTCCACCTTCTCATGTCCTTTCCTCACGACTTGTGTCTCCCTTCAGATCATCACCTTTAGGGACTATCTCCCCATCCTACTGGGTGATGAGCTACAGAAGTGGATACCCCC
GTACCAAGGCTACAAAGAAACTGTAGACCCGAGAATTTCCAATGTCTTCACCTTTGCTTTCCGCTTTGGCCACCTGGAGGTCCCCTCGACTGTGTCCCGCCTGGATGAGAATTATCAGCC
ATGGGGTTCAGAACCTGAGCTCCCCCTGCACAAGCTCTTCTTCAACACCTGGAGGGTGGTCAAAGATG
GTGAGTCTTCTCAGGGAGGTGCCCTTGCCTGGGTCCTCTCATTCCACAACCA
GCTTATAGGGACCCCTGGCATGAGAGTCACCTTCCAGACACTTCCTGTGTGACCTTGGACAAGGGAATTCGTCTCACCGAGCCTTAATTTCCTTGTTTGTAAAACGAGGGCAACAACAGA
GCCTATGTCATTGGATAGCAAATGAAATGAGATAGGTGTGTAGCACACCCTATTGTAATTCCCAACACACAGGAGTGTTTAGTAAGTAATAGCCATTACATACAGCTGGCTTCCTACTTG
GGTAAGACTCTTCTGTCTTTTCCTACCTTAGGCGTTGCTGCACTCTGAAAACAGAATTTGTGAGCTTGGCGAATTGTTCTGTTCTACCTCCATGAGGTGCTATAGGCTGGGTGCAGCTTT
CTTATCCCTCAGTCAAAACTGACCTTCCTTCAAGCTTAACCAGTCGGGGCTGTTCCCTGAAGATATATGGTCCTCTTCCTCTAGGGCAATGTGTGGGAAATGAAGGAGCTGACTCCATGA
ACTAAAACATTAAAAAAAAAACTCTTGCTATTCATTCACCCTTCAGGCCGTGAGTGACCTTTTCTGTCACCTCAGAAACTGTAGCCTGGACTCCTCCTGCCCTGGGACAAAGGGAAGGCT
GCATTGTGCTCTTCTCTTCCCACCTCCAGCCAGAACTACCTGGTCATTCCCGTTTCCTATTGAGAGAAGGTATCAGGGCAGAGAGGGCCCAGCACGGAAGATGCCCTCCCCTATTCCTAT
CTAAGAATGGCCTTTGGTGTCCCTCTGCAGGTGGAATTGATCCTCTGGTTCGAGGCCTGCTGGCCAAGAAGGCCAAACTGGCGCATCAGGATAAAATGATGACGGGGGAACTCCGCAACA
TGCTGTTCCAGCCGAATCACACCGTTCACGGCTTCGACCTAGCTGCCATCAACATACAGCGCTGCCGAGACCACGGACAGCCTG
GTGAGTGGGTCTAAGGGCTCAGTTGGTCTGGAGAAC
TTTTTGGCTACCTTCTGAGGCTCCTGGACACTCTCCTCTGGAACTCCAAGGAGCCAATTAATCCTAATGCTAGAGACAAGCCCATTTTAACGAGCCTTATGAGACATCCAGGAAACGGAA
TCTTCTGCTTTCCTGGTGCAGAGACGTGAGTTATCTTAGTGTCACAGAAGAGAACAAGAGCAACAACTCACACATCAAACCAGTTTAAAAGCCCAGAAGCGCCAGATGTGGTGCTATCAG
CACACAATCCCAGCACCCCAGAGACCCCGGCAAGAAGATTGTCCACTCCAAGTTAGCATGAGTTCCGCAGAGAAACCTTCACAGAGAGAAGGAGGGCAGGGGAGGATGAAGGGAGGGGAG
GAGGGAGACCTGGTGGAGTTTGTATTTGCACACATGAAAACCAGTTTCGCTGTTACTAAGAGCTAGGCTGCTTGATTTCATTTGCTAGTTGTCTGGATTGCTCCTGTCCTCTGCTATGAT
ACTATACCTGGCAAACACGACTGAAGGATGGGCTTAAATTGGCTCAGGGTTTGAAGGTACGGTCAGCCCGTCCTGCAGGGAAGGCATGGTGTCGGCCACATGAGACAGTTGCTCGCAGTG
AAGCCGTGGTCAGGAAGTAGCAGGAGATGGATGCTGGTGCCTTCCTATTCATGTTCAGTCCACAGGCTGCCGCTGCCCGTGTTCAGGGTGGACCTTCCCACCGCAATTAACCCTATTGAG
AAACTCCCTCTTGAGCATGTCCAGAGATGTCTCCAAACACAGCCTAGGTCTTGTCACATTGACAGTCAGTATCAACAATCACACTGGTTATAGGACTTGAGTCGAGTTCCAGCATCTTTG
CTCTTATTGTTTGCACGGCACTTGGTACAGTGCCTGGACCCATAGCAAGTCTCGGGTAAGGTGTCAACACTCGCCCAAGACTGAAGAGCCACAGATGAAAAGACATGCAGCATGTTTCCC
TTGTCCTAAAAGCTCTGATCCCAGACCTTCCCAGCTTCTGGAGGTAGAGTGCTTTACATCCCCAAGGGAGAACACAAGGGACAAGGTCCTGGGATGAGCCAGCCCTATCTTCCTTCCCCT
AGGGTACAACTCCTGGAGAGCTTTCTGTGGCTTGTCACAGCCAAAGACCCTAGAAGAGCTGAGCGCTGTGCTGAGAAATGAGGTGCTGGCCAAGAAGCTGATGGATCTCTATGGAACCCC
TGATAACATTGATATCTGGTTAGGGGCCATCGCTGAACCCCTGGTCCGCAGGGGTCGGGTAGGGCCTCTGCTGACCTGCCTCCTGGGTCAGCAATTCCAGCGGATCCGAGATGGGGACAG
GTGAGTGGGATCACTGTCTGGGCCAGGGTCAGCCCTTCCCTCCCTTAGGCAGGGTCCCCAATGTGCTTCGTGAGGTCTGACTCCACACCTCACCCTAGGAGGGGTTTTCTGCGTTCCCAA
GGGTGTCCTATGGCAGTGCGGGGAGCAGCTAGCCACTGGACTGTGTGACACGACCCTGCTCCATCCCTGTAGGTTCTGGTGGGAGAACCCTGGGGTCTTCACAGAGAAGCAGCGGGACTC
TCTACAGAAGATGTCCTTTTCGAGACTGGTCTGTGACAACACTGGCATCAACAAGGTCCCGCTGAACCCATTCCAGCCCAACAGCTACCCCCACAGCTTTGTGGACTGCTCTGCTATCGA
GAAGCTTGACCTCACCCCCTGGGCCTCAGTGAAGAAGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAAAGTCCTTCTGCGCCTCCCAGCCCTCCTGGCTTCCCTGACCTTGCTCCAGATGGCAGCATCTACCAGAAACGCTACAAGAACTGCCACCATCCGTGAAACAGTGGATGAGGTCAAGG
TCCAGGTCAACAAGGCCTTCCTGGATTCCCGGGACAG
GCTGAAGACTGACATGAGCAACCTGGCTCCTACCGTCCGTCACCTCTCAGGGTACCTCAAGCAAGCCAAAGGCCGGACACGCA
CAGCCATCCGCGTCGGGCAGGTGTGGGAGCAGTCTCTAAAAAGACTGAGGAGGATGGTGCCCTTGACCAATGTCACAG
GCCAAGGCCTGGACTTGACTTCGCTCTCTTGGGAAGTGGGCT
GTGGTCACCCGGCTCCGACAGTGACTTGCAACATAAGCAACCCTTACCGGACCATCACTGGAGACTGTAACAACAG
GAAGAATCCAGAGCTGGGATCCGCCAACAGGGCGCTGGCTCGAT
GGCTGCCCGCAGAGTATGAAGACGGGCTCTCCCTCCCCTTCGGGTGGACGCCAGGGAAGACGCGGAACGGCTTCCCTCTACCGCAG
CCCCGTGACGTCTCTAACCAGGTCCTTGACTATC
TGAATGAGGAGGAAATTCTGGACCAAAACAGATCTCTGCTCTTCATGCAGTGGGGTCAGATCGTGGACCACGATCTGGACTTTGCCCCTGAAACTGAGATGGGGAGCGACAACTACTCCA
AAGCCCAGTGCGATGAACTCTGCATCCAGGGAGACAACTGCTTTCCCATCATG
TTTCCCAAGGGTGACCCTAAATTGAAGACTCAGGGGAAATGCCTGCCTTTCTTCAGAGCTGGATTTG
TCTGCCCTACATCACCTTACCAATCCCTGGCCCGAGAACAAATCAATGCTCTAACTTCTTTCATGGATGCTAGCATGGTGTATGGTTCTGAGCCAAGCCTGGCAAATCGACTTCGAAACC
TCAGCAGCCCCCTGGGTCTCATGGCTGTCAATGAAGAGGTCTCAGATCACGGACGGCCCCTCCTGCCTTTTGTCAATGTGAAGCCCAGCCCCTGTGAGGTCATCAACAGAACGGCTGGCG
TTCCCTGCTTCCTGGCAG
GAGACTCCCGCGCCTCGGAGCAGATTTTGCTGGCCACATCCCATACGCTGTTTCTCCGGGAGCACAACCGACTGGCCAGAGAGCTGAGCAGACTCAACCCCC
AGTGGGATGGTGAGAAGCTCTATCAGGAAGCCAGGAGAATCATGGGAGCCCTCATACAG
ATCATCACCTTTAGGGACTATCTCCCCATCCTACTGGGTGATGAGCTACAGAAGTGGATAC
CCCCGTACCAAGGCTACAAAGAAACTGTAGACCCGAGAATTTCCAATGTCTTCACCTTTGCTTTCCGCTTTGGCCACCTGGAGGTCCCCTCGACTGTGTCCCGCCTGGATGAGAATTATC
AGCCATGGGGTTCAGAACCTGAGCTCCCCCTGCACAAGCTCTTCTTCAACACCTGGAGGGTGGTCAAAGATG
GTGGAATTGATCCTCTGGTTCGAGGCCTGCTGGCCAAGAAGGCCAAAC
TGGCGCATCAGGATAAAATGATGACGGGGGAACTCCGCAACATGCTGTTCCAGCCGAATCACACCGTTCACGGCTTCGACCTAGCTGCCATCAACATACAGCGCTGCCGAGACCACGGAC
AGCCTG
GGTACAACTCCTGGAGAGCTTTCTGTGGCTTGTCACAGCCAAAGACCCTAGAAGAGCTGAGCGCTGTGCTGAGAAATGAGGTGCTGGCCAAGAAGCTGATGGATCTCTATGGAA
CCCCTGATAACATTGATATCTGGTTAGGGGCCATCGCTGAACCCCTGGTCCGCAGGGGTCGGGTAGGGCCTCTGCTGACCTGCCTCCTGGGTCAGCAATTCCAGCGGATCCGAGATGGGG
ACAG
GTTCTGGTGGGAGAACCCTGGGGTCTTCACAGAGAAGCAGCGGGACTCTCTACAGAAGATGTCCTTTTCGAGACTGGTCTGTGACAACACTGGCATCAACAAGGTCCCGCTGAACC
CATTCCAGCCCAACAGCTACCCCCACAGCTTTGTGGACTGCTCTGCTATCGAGAAGCTTGACCTCACCCCCTGGGCCTCAGTGAAGAAGTAG

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