Entry information : PtaPrx79(prx16)
Entry ID 4053
Creation 2006-11-07 (Christophe Dunand)
Last sequence changes 2006-11-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-12 (Christophe Dunand)
Peroxidase information: PtaPrx79(prx16)
Name PtaPrx79(prx16)
Class Class III peroxidase    [Orthogroup: Prx099]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer Lignification
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx79
start..stop
S start..stop
PgPrx29 616 0 1..341 1..343
PabPrx195 572 0 1..341 1..343
PabPrx[P]29 529 0 31..341 18..313
PabPrx67 525 0 14..339 7..327
Literature and cross-references PtaPrx79(prx16)
Literature Koutaniemi,S., Warinowski,T., Kaerkoenen,A., Alatalo,E., Fossdal,C.G., Fagerstedt,K.V., Simola,L.K., Paulin,L. and Rudd,S. Untangling the lignin biosyntehtic pathway in Norway spruce
mRNA ref. GenBank:   AM293546
Protein sequence: PtaPrx79(prx16)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341
PWM (Da):   %s   37027.77 Transmb domain:   %s   i9-31o
PI (pH):   %s   8.71
Sequence
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Send to Peroxiscan
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MQGVGIAMMT IVCILFCIAS SLLLSLSGAD AAALTSNSIG LSKDYYKKTC PRAESVIRDT IRNATHFDPK IPARILRMHF HDCFIRGCDA SVLLDSNPNN EAEKDGPPNV SLRAFYVIDD  AKTKIESICP KTVSCADILA IAARDVVLLA GGPQWDVLKG RKDGVVSRAN DTRNLPAPTF NISQLIQSFA LRGLSLPDLI ALSGGHTLGF SHCSSFESRL HNFNATHNVD PTMEPQFAQN 
LRRVCPQPNT NRSAGSFLDS TATQFDNAYY QKLVQGKGVF ASDQALFLHN GRTSAIVRRF ANDETAFFKA FATSMLKMGS VGVLTTGGEV RINCRKVNNN S* 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGCAGGGTG TTGGAATTGC GATGATGACA ATTGTCTGCA TATTATTCTG CATCGCCTCG TCATTATTAT TATCATTATC AGGGGCGGAT GCAGCTGCAT TGACAAGTAA TAGCATAGGT  CTTAGCAAAG ACTACTACAA GAAGACGTGC CCAAGAGCAG AGAGTGTGAT AAGAGATACC ATACGCAACG CTACCCACTT CGACCCCAAA ATCCCTGCTC GCATTCTACG CATGCACTTC  CACGACTGCT TCATTCGGGT AATTCTTCTT ATAATAATTC CTAATCGCCC ACTTATTCAT TCTTTTTGTG TTGTAATATT ACTCATCGTG TCATTTTGAT CTGAATAATT GTATCTTAAA  CATTGCAGGG TTGTGACGCA TCGGTGCTGC TAGACTCTAA TCCAAACAAC GAAGCAGAGA AAGATGGACC GCCCAACGTT TCACTCCGCG CCTTCTACGT TATAGACGAT GCCAAGACAA  AGATCGAGTC CATTTGCCCT AAAACTGTTT CATGCGCTGA CATTCTCGCC ATAGCAGCCA GGGATGTTGT TCTTCTGGTA AATTTATGAC TTCGTTTTCC CTAAAAATTC ATTGCAATAA  CAAAAAACCC TATTCTATAG GGGATCTATC TATCTATATT AATTGCAATG TTTACAACAA TTTAACAGGC AGGAGGGCCA CAGTGGGACG TACTCAAAGG ACGAAAAGAC GGAGTCGTGT  CGAGGGCAAA CGATACAAGG AATTTGCCAG CTCCCACCTT TAACATCTCT CAACTCATTC AAAGCTTCGC CCTCCGTGGC CTTTCTCTGC CTGATCTCAT AGCATTGTCC GGTACTAATT  ACATATCCTC CCCATAATCT ACTTATTATT TTTTTTTCTG GTTGAATAAT GACTCATGCT ATTGATAACA GGCGGACACA CGTTGGGGTT CTCTCACTGC TCTTCGTTTG AGAGCAGACT  CCACAATTTC AACGCCACGC ATAATGTGGA TCCGACCATG GAGCCACAGT TTGCGCAGAA TCTACGCAGG GTTTGCCCCC AACCCAACAC CAACCGCAGC GCAGGTTCTT TTCTGGATTC  CACAGCTACA CAATTTGACA ACGCCTACTA CCAAAAGCTG GTACAAGGAA AAGGAGTGTT TGCCTCCGAC CAGGCACTGT TCTTGCACAA TGGTCGAACC AGTGCCATTG TAAGGAGATT  CGCTAACGAT GAGACAGCCT TCTTCAAAGC ATTTGCAACC TCCATGCTCA AGATGGGAAG TGTTGGAGTG TTGACCACCG GAGGAGAAGT GAGAATCAAC TGCAGGAAAG TGAATAACAA 
TTCCTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGGGTG TTGGAATTGC GATGATGACA ATTGTCTGCA TATTATTCTG CATCGCCTCG TCATTATTAT TATCATTATC AGGGGCGGAT GCAGCTGCAT TGACAAGTAA TAGCATAGGT  CTTAGCAAAG ACTACTACAA GAAGACGTGC CCAAGAGCAG AGAGTGTGAT AAGAGATACC ATACGCAACG CTACCCACTT CGACCCCAAA ATCCCTGCTC GCATTCTACG CATGCACTTC  CACGACTGCT TCATTCGGGG TTGTGACGCA TCGGTGCTGC TAGACTCTAA TCCAAACAAC GAAGCAGAGA AAGATGGACC GCCCAACGTT TCACTCCGCG CCTTCTACGT TATAGACGAT  GCCAAGACAA AGATCGAGTC CATTTGCCCT AAAACTGTTT CATGCGCTGA CATTCTCGCC ATAGCAGCCA GGGATGTTGT TCTTCTGGCA GGAGGGCCAC AGTGGGACGT ACTCAAAGGA  CGAAAAGACG GAGTCGTGTC GAGGGCAAAC GATACAAGGA ATTTGCCAGC TCCCACCTTT AACATCTCTC AACTCATTCA AAGCTTCGCC CTCCGTGGCC TTTCTCTGCC TGATCTCATA  GCATTGTCCG GCGGACACAC GTTGGGGTTC TCTCACTGCT CTTCGTTTGA GAGCAGACTC CACAATTTCA ACGCCACGCA TAATGTGGAT CCGACCATGG AGCCACAGTT TGCGCAGAAT  CTACGCAGGG TTTGCCCCCA ACCCAACACC AACCGCAGCG CAGGTTCTTT TCTGGATTCC ACAGCTACAC AATTTGACAA CGCCTACTAC CAAAAGCTGG TACAAGGAAA AGGAGTGTTT  GCCTCCGACC AGGCACTGTT CTTGCACAAT GGTCGAACCA GTGCCATTGT AAGGAGATTC GCTAACGATG AGACAGCCTT CTTCAAAGCA TTTGCAACCT CCATGCTCAA GATGGGAAGT 
GTTGGAGTGT TGACCACCGG AGGAGAAGTG AGAATCAACT GCAGGAAAGT GAATAACAAT TCCTAA 

Retrieve as FASTA