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Entry information : RpPxc02 (RpPOX)
Entry ID 4116
Creation 2006-12-18 (Marcel Zamocky)
Last sequence changes 2006-12-18 (Marcel Zamocky)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2012-04-27 (Christophe Dunand)
Peroxidase information: RpPxc02 (RpPOX)
Name (synonym) RpPxc02 (RpPOX)
Class Bacterial peroxicin     [Orthogroup: Pxc002]*
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Rhodopseudomonas
Organism Rhodopseudomonas palustris    [TaxId: 1076 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RpPxc02
start..stop		 S start..stop
MspPxc01 1584 0 3..1419 2..1495
MspPxc01 244 2.36e-64 2786..3094 2669..2950
MspPxc01 146 7.75e-35 1816..2041 2377..2630
MspPxc01 72 0.00000000000238 2824..2998 1715..1909
MspPxc01 66 0.000000000272 2805..2997 1773..2015
MspPxc01 65 0.000000000613 2805..2923 1082..1200
MspPxc01 57 0.000000148 2055..2242 198..377
MspPxc01 55 0.000000407 2805..2997 2189..2409
MspPxc01 55 0.000000651 961..1159 2262..2476
MspPxc01 51 0.00000827 2797..2922 2273..2420
MspPxc01 49 0.0000311 930..1019 2671..2753
FpePxc03 1410 0 209..1414 369..1571
FpePxc03 773 0 1819..2526 1897..2625
FpePxc03 173 5.63e-43 3..148 2..151
FpePxc03 150 5.05e-36 2344..2713 624..1020
FpePxc03 87 1.15e-16 477..706 2440..2644
FpePxc03 65 0.000000000576 2805..2923 1137..1255
FpePxc03 54 0.000000982 2820..2923 1125..1236
FpePxc03 52 0.00000357 2825..2975 1121..1278
FpePxc03 51 0.0000067 2158..2242 383..474
FpePxc03 49 0.0000286 223..338 2244..2347
AUspPxc01 1251 0 1812..3094 2010..3296
AUspPxc01 1054 0 3..956 2..895
AUspPxc01 240 3.08e-63 477..1121 2574..3173
AUspPxc01 165 2.14e-40 2344..2686 434..804
AUspPxc01 55 0.00000045 223..337 2378..2480
AUspPxc01 51 0.00000921 2147..2242 171..276
RosPxc01 1061 0 188..1419 687..1883
RosPxc01 914 0 1823..3084 2071..3370
RosPxc01 204 2.36e-52 477..1133 2612..3235
RosPxc01 168 2.53e-41 2344..2722 982..1382
RosPxc01 116 1.54e-25 6..176 4..154
RosPxc01 109 1.35e-23 1795..1991 1883..2079
RosPxc01 73 0.00000000000146 2796..2931 1446..1613
RosPxc01 54 0.000000715 2158..2245 722..819
RosPxc01 53 0.00000209 223..369 2431..2569
Literature and cross-references RpPxc02 (RpPOX)
Literature Copeland,A., et al;,CONSRTM US DOE Joint Genome Institute
Complete sequence of Rhodopseudomonas palustris BisB5. Unpublished
& Zamocky M. et al. (2007) Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily. (in preparation)
Protein ref. UniProtKB:   Q13AU2
DNA ref. GenBank:   CP000283 (1740702..1749986) GenPept:   ABE38797.1
Protein sequence: RpPxc02 (RpPOX)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   3094
PWM (Da):   %s   323096.61  
PI (pH):   %s   3.83
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAFTLNQAD LAFILRQIKV AEAHAAGAPL TSIYVDALGN VVPAGTPGAL LAVADPKVPV GLRTVDGQDN NIVPGREQWG AADQSMPRLL TASYTTGAGS IDLNGPAPGG VVTGGNYAAP  GTIVDTAPRT VSNLIVDMSL NNPAAIIAAL TFAGSEDVLA DQSEITAAFL ALKAARDADP LGDHAALQLE LDTILEQKGV TVTNGSIDVP NVAPDEGLSA PFNAWMTFFG QFFDHGLDLI  SKGGAGTVYV PLAADDPLRT HGPDGIAGTG DEVPGQMAFM ALTRATPAAD GSQVNTTTPF VDQNQTYTSH ASHQVFLREY KMVGGVPMAT GKLLGGAEGG LATWADVKAQ AQNMLGIVLS  DLDVLNVPLL RTDAYGEFIR DANGFAQVII GLGDDGIPNT ADDLVASGTN LAPLNLATLN NGAGPVRTSH AFLDDIAHNA APVVVDGVLT PDTDSATGND VAINPLTGQR LEYDDELLDR  HYITGDGRGN ENIGLTAVHH IFHSEHNRQV DSQKLTILNS GDIAFINEWL ATDIGALDPG FGTMTALQQL DYANSLNWDG ERLFQGARFA TEMQYQHLVF EEFARKIQPA IDPFVFNSVT  DINPAIFSEF ANTVYRFGHS MLTEAMPRLD ANGNPMDSEL GLVESFLNPV LFDNDGAISH DAGAAAIVRG MTIERGNEID EFVVDALRNN LLGLPLDLAA INIARGRDTG MPSLNETRTQ  LYAASGSTFL KPYDHWVDLA TNLKNPASIV NFVAAYGTHA TIVGATTLEA KRMAAMELVF GVDQNGDATV AADRTAFLTG TGAWAGVETG LNRIDLWIGG LAEKKMPFGG MLGSTFNAIF  ELQLENLQDG DRFYYLTRTQ GQNFLNMLEQ NSFAKLIMAN TDLAQPGPDG IRGTADDIVP RHIGVDSFAN YDYVLEVDES NQADYNGAAP GKDPQGADPF LEALGLGKVI RNDPGTAGPD  ENYIRFSGGE HIVVGGTDGD DTIITDFGDD GIWGDAGDDR IESGAGVDLV NGGAGNDIIT DSGDTGDFLK GDEGDDVIAN SNGIDILMGG SGKDVVFVGV DDTEVFAGEG DDFVLGGDGV  DFLLGNEGDD WMEAGGGFDT TAGDNSELFF NSAIKGHDVM FAGSEEHDFD AESGDDIMVQ GESVMRNEGM FGFDWAIFKG MSLDGYADMN IPIFTTDQAD ILRNRFDKVE ALSGWDNNDT  LIGDSRVFGD IAAGDITATT EGVFFNDGLD QAGLDRIAGL DQIVQVGQTG LFESGNVLFG GGGSDVIEGN GGDDILDGDR WLNVRIRITG AGEANTADNQ IATVDSLKHV FSAADAADPS  WVGKSLFELM IARTIVPNQL YIVREIIEDD GAGDTDIAVF NDIRANYVIS GNADGSIRVE HVTVSNVIDP ANGRNIVSDG VDTLRNFEVL RFADGDFTLT PPELRLNGFD SLTVADNFDA  ANYTNSTGNR VWGSGWVETG DDNSATAAAG QIRITGGVLQ FDQGNGAQIQ RTINLAGVTS ARLSFDADPN NLDGGELVRV LYSADGIVFN QLDTIVGNGG NTTRSFDLTG PFTANSAIRF  EVTSLNAANE TVNIDNLSVV VTVPAAIPTI DVGATFTEDG PATPIASLPN IADDSATMAS ARIVLTNASA GDQLVVGGLP AGIAGAIDTS VDGRITVTLT GAASRASYQD AIQAITFRTT  SQSPSVDDRI IQVTVNDGLV DSNIATSTIQ VISVNDAPNA VNDRIVTNNG NGVAFQIPDW ALTANDTDSD SPFAITVVNG ANNLTATRPA GGPVTITDTG TINGGSFNYT VSDGFATDPA  SVQVVRDTTG AINGNNGVDI LVGDGAANIL EGAGSNDLIF AGAGDDTINW TATSIGGVDI ANDGRDFVDG GAGTLDRFVV NGSGSEEAFV VYAASAALAA GFTGLKPGTE IVITRNGTVI  AELDNIEEIT INTGAGSDTV TAVGDFDPTS LNFNTITING DGGNDTVDVS TLQSAHRILF RSNGGNDTIV GNLRPQDVVE LAPGTSLANY VLADNGNGTK TLSNGTHSIT FTGSVPPQFQ  NGSAPGGNGE GVTGAFEYTA SDLAGLKALV NGQRPVGDDD DGATGVRDLS GHNNNVANPN WGSADQPFIR ITNPHYGEAD ANGNLAINPV FDGLDPRTIS NVLGSQEAGL PSAGNDANIF  FMAMGQYIDH GLDFLGKGGN GTIQIGALGG GAPGSGNPAD LTRGSVASYD ANGVPQHINR TSPYVDQNQA YGSNDLVGQF LRAGDDNGGL GAHLFAGAPD PSNPEFALLP TLRELITEHW  QNNTVFHSSS LQGGSVAFRD YFAGLVGQNG VINQALLPSM ISNFMGTNHA LLLDANPFIN VLDHYVSGDG RTNENFALTS IHTIWARNHN HHVEGLAAAG FQGTAEELFQ AAKMINEAEY  QRVVFDEYLE TLLGGLRSQG THGFEEYDPN ANAGISHEFA GAVFRFGHSL IGQTMTVLDA NGNPTQVNLF DAFLNPSNDP SAFPNPLPPG YTPQPGYAQH GVNAIIGGTV SQPAEDVDFN  IVDAVRNDLV RINADLFAFN VARGWDLGLG TLNQVRRDLA ASTNPYVAES VGFAGSNLTP YSSWEDFQQR NDLNNAVIAQ FKQAYPDLTL AAADIAAFRE VNPDIAIAMQ NDGTGIVSGI  DRLDLWVGGL AEKHINGGLV GETFWVVLSE QFERLQDGDR FYYISRFDNF DFYENFIDGQ QFADIVTRNT GMTGIPEHMF QTDPIDQNEN EGEGEGEEDG TPVGNGDPPT DDDDDDDDDD  DDDDGDGTAG GDDDDDDDTP PANGEGDGTT PPVGGVIRTG TPQPDVLVGG AGDDNIVAFA DDDVIAADAG ADAISAGDGN DFVTAGAGRD VIFAGAGNDQ VFAGDGADMI YGDAGADRIF  GHQGNDLINA GAGDDIVFGG AGNDLIVAEL SDGNDVYYGD DSEGGSGIDT LDLSAATANV TVNLGSGPLF HGSASGSQTG NDTLWSIENV YTGSGNDTIT ASNAVNVISG GTGNDTFRFT 
STSAANGDTI LDFEPGDRID LTAIDASTSA NGDQSFELIN GATFTAAGQL AVSFESREDG DFTVIRGNID GNADADFKIE VAGHHNLTSS NVGL 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Phylogenetically the peroxidase domain belongs to the peroxinectin clade of the peroxidase-cyclooxygenase superfamily. Regions: 482-885 and 2087-2683 An_peroxidase. Strain="BisB5".