View Redoxidase 413

Entry information : MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)

Entry ID	413
Creation	2005-08-11 (Christophe Dunand)
Last sequence changes	2005-08-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2019-11-13 (Christophe Dunand)

Peroxidase information: MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)

Name

MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

N/D

Tissue types

Flowers
Roots nodules
Seeds
Stems

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtPrx79 start..stop	S start..stop
GmPrx234	502	0	15..334	4..317
GmPrx307	501	1.31e-180	30..334	22..323
LjPrx31	498	1.88e-179	31..334	24..325
PvPrx02	485	2.15e-174	8..334	2..319

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '413' 'join(2209899..2210903)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2209899..2210903	1003
join(2209899..2210903)

Literature and cross-references MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)

Literature	Torres-Jerez,I. et al., unpublished.
DNA ref.	Phytozome 12: chr6 (2209899..2210903)
Cluster/Prediction ref.	Phytozome Gene 12: 31103921 UniGene: Mtr.12083
Omic ref.	Gene atlas: Mtr.12914.1.S1_at Legoo: Mtr.12914.1.S1_at

Protein sequence: MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	334 (326)
PWM (Da):	36834.66 (35828.4)	Transmb domain:	i13-30o
PI (pH):	8.71 (9.11)	Peptide Signal:	cut: 24 range:24-349

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAATKTTSTS SKTLLSFFLF FNIIINLNIS ESKLTLDYYK QTCPQFQQII QQTVTSKQIQ SPTTAAATLR LFLHDCLLPN GCDASVLLSS TPFNKAERDN DINLSLPGDS FDLIVRIKTA LELSCPNTVS CSDILATATR DLLIMLGGPH YNVYLGRRDG RASVSSFVDG FLPKPSMTMT QIVSIFTKRG FTVEEMVALS GAHTVGFSHC SEISSDIYNN SSGSGSGYNP RFVEGLKKAC
GDYKKNPTLS VFNDIMTPNK FDNVYFQNLP KGLGVLKSDH GLFSDPSTKP FVERFAKDQD YFFKVFASSM QKLSLLNVQT GRKGEIRRRC DQIN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 6, no intron) and 15 ESTs.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCAGCAA CAAAAACAAC CTCAACATCA TCAAAAACAT TGTTGTCATT CTTCTTATTC TTCAACATCA TCATTAACCT TAACATCTCC GAATCAAAAC TAACCTTAGA TTACTACAAA CAAACATGTC CACAATTCCA ACAAATCATT CAACAAACAG TAACCTCAAA ACAGATCCAA TCTCCAACCA CCGCTGCCGC CACTCTCCGT CTCTTCCTCC ACGACTGCCT CCTCCCTAAC GGCTGCGACG CCTCCGTCCT CCTCTCTTCA ACCCCTTTCA ACAAAGCTGA ACGTGACAAC GACATCAATC TCTCTCTTCC AGGAGACTCC TTTGACCTCA TCGTACGTAT CAAAACCGCT CTTGAACTCT CCTGTCCCAA CACTGTCTCT TGCTCTGACA TACTTGCTAC TGCTACACGT GATCTTCTTA TCATGCTTGG TGGTCCTCAT TACAATGTTT ACCTCGGCCG TCGCGACGGC CGAGCCTCTG TGTCATCTTT TGTTGATGGC TTTCTTCCAA AGCCGTCAAT GACAATGACA CAGATAGTTT CAATATTCAC GAAACGGGGT TTTACGGTTG AAGAGATGGT TGCTTTATCT GGTGCTCATA CAGTTGGATT TTCACATTGT AGTGAAATTA GTTCAGATAT TTACAACAAT TCTTCTGGTT CTGGTTCAGG TTATAATCCT AGATTTGTTG AAGGGTTAAA GAAAGCTTGT GGTGATTATA AGAAGAATCC AACTTTGTCT GTTTTTAATG ATATTATGAC ACCAAATAAA TTTGATAATG TTTATTTTCA GAATTTACCT AAAGGTTTAG GGGTTTTGAA ATCAGATCAT GGGTTGTTTA GTGACCCTTC AACTAAACCT TTTGTGGAAA GATTTGCTAA GGATCAAGAT TATTTCTTTA AGGTTTTTGC TAGTTCAATG CAGAAGCTTA GTCTTTTGAA TGTTCAGACT
GGTAGGAAGG GTGAGATCAG AAGAAGATGT GATCAGATTA ATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA