Entry information : MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)
Entry ID 413
Creation 2005-08-11 (Christophe Dunand)
Last sequence changes 2005-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2019-11-13 (Christophe Dunand)
Peroxidase information: MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)
Name MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Flowers
Roots nodules
Seeds
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx79
start..stop
S start..stop
GmPrx234 502 0 15..334 4..317
GmPrx307 501 1e-180 30..334 22..323
LjPrx31 498 2e-179 31..334 24..325
PvPrx02 485 2e-174 8..334 2..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2209899..2210903 1005  
join(2209899..2210903)


exon

Literature and cross-references MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)
Literature Torres-Jerez,I. et al., unpublished.
DNA ref. Phytozome 12:   chr6 (2209899..2210903)
Cluster/Prediction ref. Phytozome Gene 12:   31103921 UniGene:   Mtr.12083
Omic ref. Gene atlas:   Mtr.12914.1.S1_at Legoo:   Mtr.12914.1.S1_at
Protein sequence: MtPrx79(Medtr6g008075.1[4.0]Medtr6g008740.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334
PWM (Da):   %s   36834.66 Transmb domain:   %s   i13-30o
PI (pH):   %s   8.71
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATKTTSTS SKTLLSFFLF FNIIINLNIS ESKLTLDYYK QTCPQFQQII QQTVTSKQIQ SPTTAAATLR LFLHDCLLPN GCDASVLLSS TPFNKAERDN DINLSLPGDS FDLIVRIKTA  LELSCPNTVS CSDILATATR DLLIMLGGPH YNVYLGRRDG RASVSSFVDG FLPKPSMTMT QIVSIFTKRG FTVEEMVALS GAHTVGFSHC SEISSDIYNN SSGSGSGYNP RFVEGLKKAC 
GDYKKNPTLS VFNDIMTPNK FDNVYFQNLP KGLGVLKSDH GLFSDPSTKP FVERFAKDQD YFFKVFASSM QKLSLLNVQT GRKGEIRRRC DQIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, no intron) and 15 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAA CAAAAACAAC CTCAACATCA TCAAAAACAT TGTTGTCATT CTTCTTATTC TTCAACATCA TCATTAACCT TAACATCTCC GAATCAAAAC TAACCTTAGA TTACTACAAA  CAAACATGTC CACAATTCCA ACAAATCATT CAACAAACAG TAACCTCAAA ACAGATCCAA TCTCCAACCA CCGCTGCCGC CACTCTCCGT CTCTTCCTCC ACGACTGCCT CCTCCCTAAC  GGCTGCGACG CCTCCGTCCT CCTCTCTTCA ACCCCTTTCA ACAAAGCTGA ACGTGACAAC GACATCAATC TCTCTCTTCC AGGAGACTCC TTTGACCTCA TCGTACGTAT CAAAACCGCT  CTTGAACTCT CCTGTCCCAA CACTGTCTCT TGCTCTGACA TACTTGCTAC TGCTACACGT GATCTTCTTA TCATGCTTGG TGGTCCTCAT TACAATGTTT ACCTCGGCCG TCGCGACGGC  CGAGCCTCTG TGTCATCTTT TGTTGATGGC TTTCTTCCAA AGCCGTCAAT GACAATGACA CAGATAGTTT CAATATTCAC GAAACGGGGT TTTACGGTTG AAGAGATGGT TGCTTTATCT  GGTGCTCATA CAGTTGGATT TTCACATTGT AGTGAAATTA GTTCAGATAT TTACAACAAT TCTTCTGGTT CTGGTTCAGG TTATAATCCT AGATTTGTTG AAGGGTTAAA GAAAGCTTGT  GGTGATTATA AGAAGAATCC AACTTTGTCT GTTTTTAATG ATATTATGAC ACCAAATAAA TTTGATAATG TTTATTTTCA GAATTTACCT AAAGGTTTAG GGGTTTTGAA ATCAGATCAT  GGGTTGTTTA GTGACCCTTC AACTAAACCT TTTGTGGAAA GATTTGCTAA GGATCAAGAT TATTTCTTTA AGGTTTTTGC TAGTTCAATG CAGAAGCTTA GTCTTTTGAA TGTTCAGACT 
GGTAGGAAGG GTGAGATCAG AAGAAGATGT GATCAGATTA ATTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAA CAAAAACAAC CTCAACATCA TCAAAAACAT TGTTGTCATT CTTCTTATTC TTCAACATCA TCATTAACCT TAACATCTCC GAATCAAAAC TAACCTTAGA TTACTACAAA  CAAACATGTC CACAATTCCA ACAAATCATT CAACAAACAG TAACCTCAAA ACAGATCCAA TCTCCAACCA CCGCTGCCGC CACTCTCCGT CTCTTCCTCC ACGACTGCCT CCTCCCTAAC  GGCTGCGACG CCTCCGTCCT CCTCTCTTCA ACCCCTTTCA ACAAAGCTGA ACGTGACAAC GACATCAATC TCTCTCTTCC AGGAGACTCC TTTGACCTCA TCGTACGTAT CAAAACCGCT  CTTGAACTCT CCTGTCCCAA CACTGTCTCT TGCTCTGACA TACTTGCTAC TGCTACACGT GATCTTCTTA TCATGCTTGG TGGTCCTCAT TACAATGTTT ACCTCGGCCG TCGCGACGGC  CGAGCCTCTG TGTCATCTTT TGTTGATGGC TTTCTTCCAA AGCCGTCAAT GACAATGACA CAGATAGTTT CAATATTCAC GAAACGGGGT TTTACGGTTG AAGAGATGGT TGCTTTATCT  GGTGCTCATA CAGTTGGATT TTCACATTGT AGTGAAATTA GTTCAGATAT TTACAACAAT TCTTCTGGTT CTGGTTCAGG TTATAATCCT AGATTTGTTG AAGGGTTAAA GAAAGCTTGT  GGTGATTATA AGAAGAATCC AACTTTGTCT GTTTTTAATG ATATTATGAC ACCAAATAAA TTTGATAATG TTTATTTTCA GAATTTACCT AAAGGTTTAG GGGTTTTGAA ATCAGATCAT  GGGTTGTTTA GTGACCCTTC AACTAAACCT TTTGTGGAAA GATTTGCTAA GGATCAAGAT TATTTCTTTA AGGTTTTTGC TAGTTCAATG CAGAAGCTTA GTCTTTTGAA TGTTCAGACT 
GGTAGGAAGG GTGAGATCAG AAGAAGATGT GATCAGATTA ATTGA 

Retrieve as FASTA