View Redoxidase 4156

Entry information : CpslAPx01 (Cp-comp583_c0_seq1)

Entry ID	4156
Creation	2007-01-24 (Filippo Passardi)
Last sequence changes	2014-09-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2014-09-04 (Christophe Dunand)

Peroxidase information: CpslAPx01 (Cp-comp583_c0_seq1)

Name (synonym)

CpslAPx01 (Cp-comp583_c0_seq1)

Class

Ascorbate peroxidase [Orthogroup: APx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Zygnemophyceae Closteriaceae Closterium

Organism

Closterium peracerosum-strigosum-littorale [TaxId: 34146 ]

Cellular localisation

Cytosolic

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CpslAPx01 start..stop	S start..stop
AcvAPx01	398	1.25e-142	1..249	1..249
PensAPx01	397	5.22e-142	1..247	1..247
EhyAPx01	395	1.47e-141	1..249	1..249
PabAPx204	397	2.31e-141	1..249	59..307

Literature and cross-references CpslAPx01 (Cp-comp583_c0_seq1)

Literature	REFERENCE 1 Sekimoto,H., Tanabe,Y., Takizawa,M., Ito,N., Fukumoto,R.H. and Ito ,M.Expressed sequence tags from the Closterium peracerosum-strigosum-littorale complex, a unicellular charophycean alga, in the sexual reproduction process. DNA Res. 10 (4), 147-153 (2003). REFERENCE 2 Sekimoto,H., Tanabe,Y., Tsuchikane,Y., Shirosaki,H., Fukuda,H., Demura,T. and Ito,M. Gene Expression Profiling Using cDNA Microarray Analysis of the Sexual Reproduction Stage of the Unicellular Charophycean Alga Closterium peracerosum-strigosum-littorale Complex. Plant Physiol 141 (1), 271-279 (2006).
EST ref.	GenBank: AU295195 [5' end] BW647402.1 [5' end]

Literature

REFERENCE 1 Sekimoto,H., Tanabe,Y., Takizawa,M., Ito,N., Fukumoto,R.H. and Ito ,M.Expressed sequence tags from the Closterium peracerosum-strigosum-littorale complex, a unicellular charophycean alga, in the sexual reproduction process. DNA Res. 10 (4), 147-153 (2003).
REFERENCE 2 Sekimoto,H., Tanabe,Y., Tsuchikane,Y., Shirosaki,H., Fukuda,H., Demura,T. and Ito,M. Gene Expression Profiling Using cDNA Microarray Analysis of the Sexual Reproduction Stage of the Unicellular Charophycean Alga Closterium peracerosum-strigosum-littorale Complex. Plant Physiol 141 (1), 271-279 (2006).

EST ref.

GenBank: AU295195 [5' end] BW647402.1 [5' end]

Protein sequence: CpslAPx01 (Cp-comp583_c0_seq1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	249
PWM (Da):	27408.99
PI (pH):	5.65

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MGKSYPTVSE EYQTAITKAR RELRALIAEK NCAPIMVRLA WHNAGTFDVK DKTGGPFGTI RKPEELAHGA NAGLKWAVDI LEPIKAKFPT LSYGDLYQLA GVVAVEVTGG PEIPFHPGRK DEEKTPPEGR LPDATKGSDH LRDIFYKMGL NDKEIVALSG AHTLGKCHKE RSGFEGAWTT QPLKFDNEYF VNLLSNQEKD LLVLPSDKAL VEDPEFKKFV DIYAKDEDAF FADYAAAHLA
LSELGFADA

Retrieve as FASTA

Remarks

Complete sequence from 2 ESTs and RNA seq. Note that Closterium probably does not possess any CCP (to be verified in the future...).

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGGGAAGT CATACCCTAC CGTCAGCGAG GAGTACCAGA CGGCCATTAC CAAGGCTAGG AGGGAACTGA GGGCTCTCAT CGCGGAGAAG AACTGCGCTC CCATCATGGT TCGCCTGGCT TGGCATAATG CTGGCACTTT CGATGTCAAG GATAAGACCG GAGGTCCCTT CGGAACGATC CGCAAGCCGG AGGAGCTGGC GCACGGAGCG AACGCTGGGC TCAAGTGGGC TGTTGATATC CTTGAGCCCA TCAAGGCCAA GTTCCCCACC CTCTCATACG GAGACCTCTA CCAGCTTGCT GGAGTCGTCG CTGTGGAGGT CACTGGAGGC CCAGAGATCC CCTTCCATCC CGGACGCAAG GACGAGGAGA AGACTCCGCC TGAAGGTCGC CTACCAGATG CCACGAAGGG CTCCGACCAC CTGAGGGACA TCTTCTACAA GATGGGTCTC AATGACAAGG AGATTGTCGC GCTTTCTGGC GCTCACACCC TGGGGAAATG CCACAAGGAA AGGTCGGGAT TCGAGGGCGC GTGGACGACA CAACCCCTGA AGTTTGACAA CGAGTACTTT GTCAACCTTC TGAGCAACCA GGAGAAGGAT CTGTTGGTGC TTCCCAGTGA CAAGGCCCTC GTGGAGGACC CCGAGTTCAA GAAGTTTGTG GACATCTATG CTAAGGATGA GGATGCTTTC TTTGCTGACT ATGCCGCGGC TCACCTAGCA
CTCTCAGAGC TCGGGTTCGC TGATGCTTAA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ACTAAGGAAT GAATCCCAAG GCGGATGCTG CTGAAACTAC ATCAGCCACA TTCAACATTT TGATAGGGCG GTACTTGGCA CTTTCTTGCT CCTCCCTAGC TTGCTTGTGG CTTCGTGTTC TTGTCTATTT CCAGCAGCGC AGAGTCCGTA GCCATGGGGA AGTCATACCC TACCGTCAGC GAGGAGTACC AGACGGCCAT TACCAAGGCT AGGAGGGAAC TGAGGGCTCT CATCGCGGAG AAGAACTGCG CTCCCATCAT GGTTCGCCTG GCTTGGCATA ATGCTGGCAC TTTCGATGTC AAGGATAAGA CCGGAGGTCC CTTCGGAACG ATCCGCAAGC CGGAGGAGCT GGCGCACGGA GCGAACGCTG GGCTCAAGTG GGCTGTTGAT ATCCTTGAGC CCATCAAGGC CAAGTTCCCC ACCCTCTCAT ACGGAGACCT CTACCAGCTT GCTGGAGTCG TCGCTGTGGA GGTCACTGGA GGCCCAGAGA TCCCCTTCCA TCCCGGACGC AAGGACGAGG AGAAGACTCC GCCTGAAGGT CGCCTACCAG ATGCCACGAA GGGCTCCGAC CACCTGAGGG ACATCTTCTA CAAGATGGGT CTCAATGACA AGGAGATTGT CGCGCTTTCT GGCGCTCACA CCCTGGGGAA ATGCCACAAG GAAAGGTCGG GATTCGAGGG CGCGTGGACG ACACAACCCC TGAAGTTTGA CAACGAGTAC TTTGTCAACC TTCTGAGCAA CCAGGAGAAG GATCTGTTGG TGCTTCCCAG TGACAAGGCC CTCGTGGAGG ACCCCGAGTT CAAGAAGTTT GTGGACATCT ATGCTAAGGA TGAGGATGCT TTCTTTGCTG ACTATGCCGC GGCTCACCTA GCACTCTCAG AGCTCGGGTT CGCTGATGCT TAAAGCTTTG ACGCAGTTTG TTATATTTCA GAGCCTATAC ATGAGAAGCG TTTGTAACCT
CTTGAGCTAT TTATCATCGT GGAAAAATAT ATACCATGTG AAGCCAAGAT ACTACCAGAA CAGAAAAAAA AAAAAAAAAA AA

Retrieve as FASTA