Entry information : CpslAPx01 (Cp-comp583_c0_seq1)
Entry ID 4156
Creation 2007-01-24 (Filippo Passardi)
Last sequence changes 2014-09-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-09-04 (Christophe Dunand)
Peroxidase information: CpslAPx01 (Cp-comp583_c0_seq1)
Name (synonym) CpslAPx01 (Cp-comp583_c0_seq1)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Closteriaceae Closterium
Organism Closterium peracerosum-strigosum-littorale    [TaxId: 34146 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpslAPx01
start..stop
S start..stop
AcvAPx01 398 1e-142 1..249 1..249
PensAPx01 397 5e-142 1..247 1..247
EhyAPx01 395 1e-141 1..249 1..249
PabAPx204 397 2e-141 1..249 59..307
Literature and cross-references CpslAPx01 (Cp-comp583_c0_seq1)
Literature REFERENCE 1 Sekimoto,H., Tanabe,Y., Takizawa,M., Ito,N., Fukumoto,R.H. and Ito ,M.Expressed sequence tags from the Closterium peracerosum-strigosum-littorale complex, a unicellular charophycean alga, in the sexual reproduction process. DNA Res. 10 (4), 147-153 (2003).
REFERENCE 2 Sekimoto,H., Tanabe,Y., Tsuchikane,Y., Shirosaki,H., Fukuda,H., Demura,T. and Ito,M. Gene Expression Profiling Using cDNA Microarray Analysis of the Sexual Reproduction Stage of the Unicellular Charophycean Alga Closterium peracerosum-strigosum-littorale Complex. Plant Physiol 141 (1), 271-279 (2006).

EST ref. GenBank:   AU295195 [5' end]   BW647402.1 [5' end]
Protein sequence: CpslAPx01 (Cp-comp583_c0_seq1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   27408.99  
PI (pH):   %s   5.65
Sequence 0
Send to BLAST
Send to Peroxiscan
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MGKSYPTVSE EYQTAITKAR RELRALIAEK NCAPIMVRLA WHNAGTFDVK DKTGGPFGTI RKPEELAHGA NAGLKWAVDI LEPIKAKFPT LSYGDLYQLA GVVAVEVTGG PEIPFHPGRK  DEEKTPPEGR LPDATKGSDH LRDIFYKMGL NDKEIVALSG AHTLGKCHKE RSGFEGAWTT QPLKFDNEYF VNLLSNQEKD LLVLPSDKAL VEDPEFKKFV DIYAKDEDAF FADYAAAHLA 
LSELGFADA 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs and RNA seq. Note that Closterium probably does not possess any CCP (to be verified in the future...).
CDS
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ATGGGGAAGT CATACCCTAC CGTCAGCGAG GAGTACCAGA CGGCCATTAC CAAGGCTAGG AGGGAACTGA GGGCTCTCAT CGCGGAGAAG AACTGCGCTC CCATCATGGT TCGCCTGGCT  TGGCATAATG CTGGCACTTT CGATGTCAAG GATAAGACCG GAGGTCCCTT CGGAACGATC CGCAAGCCGG AGGAGCTGGC GCACGGAGCG AACGCTGGGC TCAAGTGGGC TGTTGATATC  CTTGAGCCCA TCAAGGCCAA GTTCCCCACC CTCTCATACG GAGACCTCTA CCAGCTTGCT GGAGTCGTCG CTGTGGAGGT CACTGGAGGC CCAGAGATCC CCTTCCATCC CGGACGCAAG  GACGAGGAGA AGACTCCGCC TGAAGGTCGC CTACCAGATG CCACGAAGGG CTCCGACCAC CTGAGGGACA TCTTCTACAA GATGGGTCTC AATGACAAGG AGATTGTCGC GCTTTCTGGC  GCTCACACCC TGGGGAAATG CCACAAGGAA AGGTCGGGAT TCGAGGGCGC GTGGACGACA CAACCCCTGA AGTTTGACAA CGAGTACTTT GTCAACCTTC TGAGCAACCA GGAGAAGGAT  CTGTTGGTGC TTCCCAGTGA CAAGGCCCTC GTGGAGGACC CCGAGTTCAA GAAGTTTGTG GACATCTATG CTAAGGATGA GGATGCTTTC TTTGCTGACT ATGCCGCGGC TCACCTAGCA 
CTCTCAGAGC TCGGGTTCGC TGATGCTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACTAAGGAAT GAATCCCAAG GCGGATGCTG CTGAAACTAC ATCAGCCACA TTCAACATTT TGATAGGGCG GTACTTGGCA CTTTCTTGCT CCTCCCTAGC TTGCTTGTGG CTTCGTGTTC  TTGTCTATTT CCAGCAGCGC AGAGTCCGTA GCCATGGGGA AGTCATACCC TACCGTCAGC GAGGAGTACC AGACGGCCAT TACCAAGGCT AGGAGGGAAC TGAGGGCTCT CATCGCGGAG  AAGAACTGCG CTCCCATCAT GGTTCGCCTG GCTTGGCATA ATGCTGGCAC TTTCGATGTC AAGGATAAGA CCGGAGGTCC CTTCGGAACG ATCCGCAAGC CGGAGGAGCT GGCGCACGGA  GCGAACGCTG GGCTCAAGTG GGCTGTTGAT ATCCTTGAGC CCATCAAGGC CAAGTTCCCC ACCCTCTCAT ACGGAGACCT CTACCAGCTT GCTGGAGTCG TCGCTGTGGA GGTCACTGGA  GGCCCAGAGA TCCCCTTCCA TCCCGGACGC AAGGACGAGG AGAAGACTCC GCCTGAAGGT CGCCTACCAG ATGCCACGAA GGGCTCCGAC CACCTGAGGG ACATCTTCTA CAAGATGGGT  CTCAATGACA AGGAGATTGT CGCGCTTTCT GGCGCTCACA CCCTGGGGAA ATGCCACAAG GAAAGGTCGG GATTCGAGGG CGCGTGGACG ACACAACCCC TGAAGTTTGA CAACGAGTAC  TTTGTCAACC TTCTGAGCAA CCAGGAGAAG GATCTGTTGG TGCTTCCCAG TGACAAGGCC CTCGTGGAGG ACCCCGAGTT CAAGAAGTTT GTGGACATCT ATGCTAAGGA TGAGGATGCT  TTCTTTGCTG ACTATGCCGC GGCTCACCTA GCACTCTCAG AGCTCGGGTT CGCTGATGCT TAAAGCTTTG ACGCAGTTTG TTATATTTCA GAGCCTATAC ATGAGAAGCG TTTGTAACCT 
CTTGAGCTAT TTATCATCGT GGAAAAATAT ATACCATGTG AAGCCAAGAT ACTACCAGAA CAGAAAAAAA AAAAAAAAAA AA 

Retrieve as FASTA