Entry information : PnoPGHS01
| Entry ID | 4168 |
|---|---|
| Creation | 2007-01-31 (Marcel Zamocky) |
| Last sequence changes | 2007-01-31 (Marcel Zamocky) |
| Sequence status | complete |
| Reviewer | reviewer name not stored |
| Last annotation changes | 2013-09-04 (Catherine Mathe (Scipio)) |
Peroxidase information: PnoPGHS01
| Name | PnoPGHS01 | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | H synthase [Orthogroup: PGHS001] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Fungi Ascomycota Dothideomycetes Phaeosphaeriaceae Phaeosphaeria | ||||||||||||||||||||||||||||||||||||
| Organism | Phaeosphaeria nodorum (Stagonospora nodorum) [TaxId: 13684 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue type | N/D |
||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4168' 'complement(join(151917..151981,152044..153379,153531..154001))' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references PnoPGHS01
| Literature | Birren,B., Lander,E., Galagan,J., Devon,K., Nusbaum,C., Jaffe,D.,
Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., Brockman,W., Rounsley,S., Young,S., LaButti,K., Pushparaj,V., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Kodira,C., Zeng,Q., Yandava,C., Alvarado,L., Oleary,S., Oliver,R.O. and Solomon,P. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Annotation of the Phaeosphaeria nodorum SN15 genome. Zamocky M. et al. (2007) Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (In preparation). |
|---|---|
| Protein ref. | UniProtKB: Q0URU2 |
| DNA ref. | JGI genome: scaffold_8 (154001..151917) |
Protein sequence: PnoPGHS01
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Softberry predicted 3 exons in the genomic DNA. Strain="SN15". Exon/intron distribution still under discussion. | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
