Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
254 (231) |
PWM (Da): |
26821.74 (24681.7) |
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PI (pH):
| 7.74 (7.83) |
Peptide Signal:
| cut: 24 range:24-254 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVSCASIVAV AVAVASFVSS SSSRILDPNK LAVGEFFRPS GHVVSGFFNT TASFRRSPCP ALNVLANHGH LPRNGQGITK DQIGSALKSV LNQGDDAVVA LLASLPDTIA LSDLSQHNVW
DHDASLVHTD AHFGHDPSEV NISLANDLFN RGKISNKLGV NEVGNAYKDR RQAGKSYEPK YSLSDAQKTQ SYSQGAGLLL VFGAKNGESV SLDVARSFLI DERIPQGWKP AATPITVADS
RATSAKIREV AEAM
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (1 exon, Softberry predict 4 exons!) and 2 ESTs (AAN31510 and BE7776736). Strain="DDR7602", "T30-4". |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTACATCGCC TCGGCGACCT CACGAATCTT GGCAGAGGTG GCACGAGAGT CAGCAACAGT GATAGGAGTA GCAGCGGGCT TCCATCCCTG CGGGATCCTC TCGTCGATGA GAAAGGAGCG
AGCGACGTCC AACGAAACGC TCTCTCCGTT TTTTGCGCCG AAGACCAGCA AGAGACCTGC CCCCTGACTG TACGACTGGG TCTTTTGCGC GTCCGAGAGG GAATATTTTG GCTCGTAAGA
TTTACCTGCT TGGCGGCGGT CCTTGTAGGC ATTTCCCACC TCATTGACGC CCAGCTTATT GCTAATTTTC CCACGGTTGA AGAGGTCGTT GGCCAGCGAG ATGTTGACCT CGGACGGGTC
ATGGCCGAAA TGCGCGTCAG TGTGAACGAG TGACGCATCG TGATCCCAGA CGTTATGCTG GGACAGGTCG CTAAGCGCGA TGGTATCGGG CAAGCTCGCC AGTAGCGCAA CCACGGCGTC
GTCTCCCTGG TTCAAGACCG ACTTGAGGGC AGATCCAATC TGGTCCTTGG TGATGCCTTG GCCGTTACGC GGTAGGTGAC CGTGGTTGGC GAGCACGTTA AGTGCGGGAC AGGGTGAGCG
GCGGAAAGAT GCCGTGGTGT TGAAGAAGCC CGAGACCACG TGTCCCGAAG GTCTGAAGAA CTCTCCGACA GCGAGCTTGT TGGGGTCGAG GATCCGGCTG CTGCTCGAGC TCACAAACGA
GGCGACAGCG ACGGCGACGG CGACGATAGA GGCGCATGAA ACCAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTACATCGCC TCGGCGACCT CACGAATCTT GGCAGAGGTG GCACGAGAGT CAGCAACAGT GATAGGAGTA GCAGCGGGCT TCCATCCCTG CGGGATCCTC TCGTCGATGA GAAAGGAGCG
AGCGACGTCC AACGAAACGC TCTCTCCGTT TTTTGCGCCG AAGACCAGCA AGAGACCTGC CCCCTGACTG TACGACTGGG TCTTTTGCGC GTCCGAGAGG GAATATTTTG GCTCGTAAGA
TTTACCTGCT TGGCGGCGGT CCTTGTAGGC ATTTCCCACC TCATTGACGC CCAGCTTATT GCTAATTTTC CCACGGTTGA AGAGGTCGTT GGCCAGCGAG ATGTTGACCT CGGACGGGTC
ATGGCCGAAA TGCGCGTCAG TGTGAACGAG TGACGCATCG TGATCCCAGA CGTTATGCTG GGACAGGTCG CTAAGCGCGA TGGTATCGGG CAAGCTCGCC AGTAGCGCAA CCACGGCGTC
GTCTCCCTGG TTCAAGACCG ACTTGAGGGC AGATCCAATC TGGTCCTTGG TGATGCCTTG GCCGTTACGC GGTAGGTGAC CGTGGTTGGC GAGCACGTTA AGTGCGGGAC AGGGTGAGCG
GCGGAAAGAT GCCGTGGTGT TGAAGAAGCC CGAGACCACG TGTCCCGAAG GTCTGAAGAA CTCTCCGACA GCGAGCTTGT TGGGGTCGAG GATCCGGCTG CTGCTCGAGC TCACAAACGA
GGCGACAGCG ACGGCGACGG CGACGATAGA GGCGCATGAA ACCAT
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Retrieve as FASTA
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