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Entry information : GmPrx10 (Glyma06g45910.1 / PC7)
Entry ID 423
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2011-10-10 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx10 (Glyma06g45910.1 / PC7)
Name (synonym) GmPrx10 (Glyma06g45910.1 / PC7)
Class Class III peroxidase    [Orthogroup: Prx188]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Hypocotyls
Roots
Inducers Cyst nematode infection
Pathogen interaction
Phytophthora infection
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx10
start..stop		 S start..stop
GmPrx45 632 0 1..324 1..324
PvPrx12 589 0 1..324 1..325
GmPrx162 565 0 1..324 1..325
MtPrx53 550 0 1..323 3..326
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48637410..48637619 208 N° 2 48637105..48637296 190 N° 3 48636059..48636221 161 N° 4 48635024..48635433 408
complement(join(48635024..48635433,48636059..48636221,48637105..48637296,4863741 0..48637619))


exon

Literature and cross-references GmPrx10 (Glyma06g45910.1 / PC7)
Literature Chen,W. and Atherly,A.G, unpublished.
Protein ref. UniProtKB:   Q9ZTW8 [Incorrect prediction]
DNA ref. Phytozome 12:   Gm06 (48637619..48635024)
Cluster/Prediction ref. UniGene:   Gma.320
Protein sequence: GmPrx10 (Glyma06g45910.1 / PC7)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (301)
PWM (Da):   %s   35129.04 (32719.8) Transmb domain:   %s   o422-441i555-577o614-636i789-806o
PI (pH):   %s   8.16 (8.02) Peptide Signal:   %s   cut: 24 range:24-324
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSQSYFKALIICLIALIGSTQAQLQLGFYAKSCPKAEQIILKYV
VEHIHNAPSLAAALIRLHFHDCFVNGCDGSVLVDSTPGNQAEKDAIPNLTLRGFGFIEAIKRLVEAECPGVVSCADILALTARDSIHATGGPYWNVPTGRRDGFISRAADPLRSLPAPFHNLTTQLTLFGNVGLDANDLVLLVGA
HTIGIAHCSSISTRLYNFTGKGDTDPTIDNGYAKNLKTFKCKNINDNSLIEMDPGSRDTFDLGYYKQVVKRRGLFQSDAELLTSPITRSIIASQLQSTQGFFAEFAKSMEKMGRINVKLG
SEGEIRKHCARVNN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 35 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAGCCAGAGTTACTTCAAGGCTTTGATTATTTGCCTTATAGCACTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCTGAGCAAATA
ATTCTGAAGTACGTTGTTGAGCATATCCACAACGCTCCATCACTAGCAGCTGCTCTCATAAGATTGCACTTCCATGATTGTTTTGTCAATGTATGCACATATTTATGGTTTCATTTTCTA
GTTAATTGATGACTATTTTGTTAAACTGATGAGGAGGTAACATTAATTAACGTGTAGTGTATATATATTAATATTAATTTCAGGGGGTTGTGATGGATCAGTGCTTGTGGACTCAACACC
AGGGAATCAAGCTGAAAAGGACGCTATTCCAAATCTTACACTCCGAGGCTTTGGCTTCATTGAAGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATAT
CTTGGCTTTGACTGCCAGAGACTCTATTCATGCCACTGTAAGTACTTACTTCATCTTTTAAACTCTCAATTAATTGAAAGAATTTTATAATTAAGAATATAATAAATAATAGTTAAATTT
AATCTTATTTGTATGGAAAATTCATATTGTGTTGTACTTCTGTTGAAAATTTTACTATATGTACTTCACAAATAGTTTGAATATCCCAAACTTTATATTTTTTTTGTTGTCCTTTTTCTA
CCAATCTTCATCACAAACCACTTACATGGCTCCGTCAAGCATTGTAGTATAAGTATTTTTGTGACGTAGAGTTGCAATATGACGACTCTTGATGGAGTTATATTAGCGTTTTGTAAAGAA
ATGACTAAGAATGAAAGGTTATTTCATCACATATATCATAAACGGAAAACTAATTACATAAGTAATTATATAAATTAAAAGCAAAAATCAAGATATTTACTAGGATGAAAAATATATTTA
AATTGAGATAAACTATAACACCTTTTAATATTTATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATTTATAATAACAATTT
TTTTTATTTTTAAAACATCATTTTTTTCCCTTTTAATTTGTTATATCAATATCATATGCTATATTAGTGGCCATATAATTTTAAAAATTTATTCTGTCCTTAAAATTGTCCATGTTGCAT
TAAATTCGTGTTTGTGTGTTACAAACTAGGGTTGGCCTGATGGTAGAAGTTAGAATAGATGCATGAAATTTAAGTTTGACTTTCATTATCATCATTCTAAAAAAAAAACTCATGTTTCTG
CTATGTTTTCTCTATGCTTTCTTATATAGAATAGAAATGAGTCAGATTCTTGTTTTGTGATGATTGAGATGGGTTTGCAGGGGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGA
TGGGTTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTTCCTGCTCCTTTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACCTTGTCTTGCT
TGTTGGTATGTTAAACACAAGTTGCATGATAAAAGTTTGCATCAGGCTAGTTGAGAAAACATTTTCTATTTTTTTTCACTTTTAATTATAAAACTGACATTTATTTTTAAATTACTTTTT
GTTTTCTAAAACTTGTACTTCGTCCGTACTCAACTATAAGAAGAAAAAAAAAGTTAGGTGGACTGAAATGTAAATCAATTTCAACTCATTCAACCTTATTTAATTAATGTCATTATTTCA
AAATATCCAGGAATTAATTAAAATGTGATTAACATCTTCGATAAATATGATTAAGGATAATTTAAAAAATGCAATTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAAAAAA
TTAAATAAACTTAGTTAACAACCATAATTAGTGTGAAATTATATATTATTATTTATATTTGAGTTTGAAGGGAGTATAAGAACACATAAAACATAAAAGATTTTTCAAAGTAAATAAGTC
CTAAGTCAATTAAATAAAACTCTCATTGTGATTGAGAATAATACTAGAAACACCAAAAAATTATATACATATATATAAGTTTTTTTTTTCTTTTTTTGTTCTACATTTAAATTTCTCTAT
CTCTAATCGCCAAAAATTCAATTCCTTCAGGTGTGCTCACACAATTGGTATTGCCCATTGTTCATCAATTTCAACCCGTCTATACAATTTCACAGGCAAGGGTGACACAGACCCAACAAT
AGACAATGGATATGCAAAAAATCTCAAGACCTTCAAGTGTAAGAACATTAATGATAACTCACTTATTGAGATGGACCCTGGAAGTCGTGATACATTTGATCTTGGATATTACAAACAAGT
GGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGAATTGCTTACTAGTCCTATCACAAGGTCTATTATCGCTAGTCAACTTCAGTCAACTCAAGGATTCTTTGCGGAATTTGCCAAGTC
TATGGAGAAAATGGGACGAATTAATGTCAAGCTTGGATCTGAAGGAGAGATAAGGAAACATTGTGCACGAGTTAATAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAGCCAGAGTTACTTCAAGGCTTTGATTATTTGCCTTATAGCACTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCTGAGCAAATA
ATTCTGAAGTACGTTGTTGAGCATATCCACAACGCTCCATCACTAGCAGCTGCTCTCATAAGATTGCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTGTGGACTCA
ACACCAGGGAATCAAGCTGAAAAGGACGCTATTCCAAATCTTACACTCCGAGGCTTTGGCTTCATTGAAGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCT
GATATCTTGGCTTTGACTGCCAGAGACTCTATTCATGCCACTGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGATGGGTTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTT
CCTGCTCCTTTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACCTTGTCTTGCTTGTTGGTGCTCACACAATTGGTATTGCCCATTGTTCATCA
ATTTCAACCCGTCTATACAATTTCACAGGCAAGGGTGACACAGACCCAACAATAGACAATGGATATGCAAAAAATCTCAAGACCTTCAAGTGTAAGAACATTAATGATAACTCACTTATT
GAGATGGACCCTGGAAGTCGTGATACATTTGATCTTGGATATTACAAACAAGTGGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGAATTGCTTACTAGTCCTATCACAAGGTCTATT
ATCGCTAGTCAACTTCAGTCAACTCAAGGATTCTTTGCGGAATTTGCCAAGTCTATGGAGAAAATGGGACGAATTAATGTCAAGCTTGGATCTGAAGGAGAGATAAGGAAACATTGTGCA
CGAGTTAATAACTAA

Retrieve as FASTA