Entry information : PnoHalPrx12
Entry ID 4236
Creation 2007-01-29 (Filippo Passardi)
Last sequence changes 2007-01-29 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-09-04 (Catherine Mathe (Scipio))
Peroxidase information: PnoHalPrx12
Name PnoHalPrx12
Class Haloperoxidase (haem)    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Phaeosphaeriaceae Phaeosphaeria
Organism Phaeosphaeria nodorum (Stagonospora nodorum)    [TaxId: 13684 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PnoHalPrx12
start..stop
S start..stop
PnoHalPrx10 218 2e-66 20..412 19..392
GzHalPrx04 196 8e-58 33..390 21..370
PnoHalPrx13 177 4e-51 10..394 10..382
AteHalPrx03 176 3e-50 66..443 75..444
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 71269..72633 1365  
join(71269..72633)


exon

Literature and cross-references PnoHalPrx12
Literature Birren B. et al.

Annotation of the Phaeosphaeria nodorum SN15 genome

unpublished
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=62361715&itemID=33&view=gbwithparts
Protein ref. GenPept:   111055101 UniProtKB:   Q0TVR6
DNA ref. JGI genome:   scaffold_47 (71269..72633)
Protein sequence: PnoHalPrx12
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   454 (435)
PWM (Da):   %s   48531.97 (46674.9)  
PI (pH):   %s   5.95 (5.76) Peptide Signal:   %s   cut: 20 range:20-454
Sequence 0
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Send to Peroxiscan
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MFAKTSLALL AGPTILASAF PEIARMVAEK RIQERQTTPQ IIPFPEYPGT PNHALFDQFD PALQLVNTTG EHEWRAPGPG DIRGPCAGLN AAANHGYIQR DGVVDAASIN TGLWQAFGLD  KTATIFLETA TAFFNGDPIS GRWSIGPHSD KTSSLPPLIG DALGNETGIC AYGHLRSEGD ASITRGDWLA PEMNSNCRSY PQYMQELFDL ANTRANGLIT PRVLAEHSNN RKKHSIATNP  FYFSPAYAGV AFTFGAHMFA YHLLANHSAE SPRGFLTQDV FMDFFSYKRD ASGALTYKYG YERIPDNWYK RHPLDPWTLA DIGISTAQQC AAYPLNCQVG GNTGAVNSFS GVNLGDITGG 
LINFAEDLND PKKMGCFIAQ AVQADTPSFL SKLLGGAALT AALAAVDSRL GPAVQPLKDL GGGCQGVPAG RSMFDYGINF PGAALETEGP RSGQ 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="SN15". 1 exon.
DNA
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ATGTTTGCGA AGACATCCCT CGCCCTTCTG GCCGGGCCAA CGATCCTGGC CTCCGCCTTC CCAGAGATCG CCCGCATGGT CGCAGAAAAG CGTATCCAAG AGCGCCAAAC AACTCCCCAG  ATCATCCCAT TCCCAGAATA CCCAGGCACC CCCAACCACG CCCTGTTCGA CCAATTCGAC CCCGCCCTCC AACTCGTCAA CACAACTGGC GAGCACGAGT GGCGCGCCCC GGGCCCAGGA  GACATCCGCG GTCCCTGTGC CGGCCTCAAC GCCGCCGCAA ACCACGGCTA CATCCAGCGT GATGGTGTCG TTGATGCTGC GAGTATCAAC ACCGGGCTGT GGCAAGCCTT CGGTCTCGAC  AAGACCGCTA CCATCTTCCT CGAGACGGCT ACTGCATTCT TCAACGGCGA CCCCATTTCC GGGCGCTGGA GCATCGGCCC TCACTCAGAC AAAACCTCCT CCCTGCCCCC TCTCATTGGC  GACGCACTCG GCAACGAAAC AGGCATCTGC GCCTACGGCC ATCTCAGGAG TGAGGGTGAC GCGAGTATAA CACGCGGAGA CTGGCTCGCC CCCGAAATGA ACTCAAACTG CCGCTCCTAC  CCACAATACA TGCAAGAGCT CTTCGACCTC GCCAACACGC GCGCAAACGG GCTCATCACA CCGCGCGTGC TGGCTGAGCA CTCGAACAAC CGCAAGAAGC ACAGCATCGC CACGAACCCC  TTCTACTTCA GCCCGGCGTA CGCTGGCGTG GCGTTTACCT TTGGCGCGCA CATGTTCGCG TACCACCTGC TCGCCAACCA CAGCGCCGAA TCACCACGCG GATTCCTGAC GCAGGATGTG  TTTATGGATT TCTTCAGCTA CAAGCGCGAC GCCTCGGGTG CGTTGACGTA TAAATACGGC TACGAGCGGA TTCCGGATAA CTGGTACAAG CGACATCCCC TCGACCCCTG GACGCTCGCA  GACATTGGCA TCTCGACCGC CCAGCAGTGC GCCGCGTACC CGCTCAACTG CCAAGTCGGC GGCAACACGG GCGCGGTGAA CAGTTTCTCG GGCGTAAATC TGGGCGACAT CACGGGTGGG  CTCATCAATT TCGCAGAGGA CCTCAACGAC CCGAAGAAAA TGGGGTGCTT CATTGCGCAG GCGGTGCAGG CGGATACGCC GTCTTTCTTG AGCAAACTTC TCGGCGGCGC GGCTTTGACG  GCGGCGCTGG CCGCGGTGGA TAGTAGGCTG GGTCCCGCGG TGCAGCCGCT GAAGGATCTG GGAGGTGGGT GTCAGGGCGT GCCCGCGGGC AGGAGTATGT TCGACTATGG GATTAATTTC 
CCGGGGGCGG CGCTTGAGAC TGAGGGGCCG AGGTCGGGGC AGTGA 

Retrieve as FASTA  
CDS
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ATGTTTGCGA AGACATCCCT CGCCCTTCTG GCCGGGCCAA CGATCCTGGC CTCCGCCTTC CCAGAGATCG CCCGCATGGT CGCAGAAAAG CGTATCCAAG AGCGCCAAAC AACTCCCCAG  ATCATCCCAT TCCCAGAATA CCCAGGCACC CCCAACCACG CCCTGTTCGA CCAATTCGAC CCCGCCCTCC AACTCGTCAA CACAACTGGC GAGCACGAGT GGCGCGCCCC GGGCCCAGGA  GACATCCGCG GTCCCTGTGC CGGCCTCAAC GCCGCCGCAA ACCACGGCTA CATCCAGCGT GATGGTGTCG TTGATGCTGC GAGTATCAAC ACCGGGCTGT GGCAAGCCTT CGGTCTCGAC  AAGACCGCTA CCATCTTCCT CGAGACGGCT ACTGCATTCT TCAACGGCGA CCCCATTTCC GGGCGCTGGA GCATCGGCCC TCACTCAGAC AAAACCTCCT CCCTGCCCCC TCTCATTGGC  GACGCACTCG GCAACGAAAC AGGCATCTGC GCCTACGGCC ATCTCAGGAG TGAGGGTGAC GCGAGTATAA CACGCGGAGA CTGGCTCGCC CCCGAAATGA ACTCAAACTG CCGCTCCTAC  CCACAATACA TGCAAGAGCT CTTCGACCTC GCCAACACGC GCGCAAACGG GCTCATCACA CCGCGCGTGC TGGCTGAGCA CTCGAACAAC CGCAAGAAGC ACAGCATCGC CACGAACCCC  TTCTACTTCA GCCCGGCGTA CGCTGGCGTG GCGTTTACCT TTGGCGCGCA CATGTTCGCG TACCACCTGC TCGCCAACCA CAGCGCCGAA TCACCACGCG GATTCCTGAC GCAGGATGTG  TTTATGGATT TCTTCAGCTA CAAGCGCGAC GCCTCGGGTG CGTTGACGTA TAAATACGGC TACGAGCGGA TTCCGGATAA CTGGTACAAG CGACATCCCC TCGACCCCTG GACGCTCGCA  GACATTGGCA TCTCGACCGC CCAGCAGTGC GCCGCGTACC CGCTCAACTG CCAAGTCGGC GGCAACACGG GCGCGGTGAA CAGTTTCTCG GGCGTAAATC TGGGCGACAT CACGGGTGGG  CTCATCAATT TCGCAGAGGA CCTCAACGAC CCGAAGAAAA TGGGGTGCTT CATTGCGCAG GCGGTGCAGG CGGATACGCC GTCTTTCTTG AGCAAACTTC TCGGCGGCGC GGCTTTGACG  GCGGCGCTGG CCGCGGTGGA TAGTAGGCTG GGTCCCGCGG TGCAGCCGCT GAAGGATCTG GGAGGTGGGT GTCAGGGCGT GCCCGCGGGC AGGAGTATGT TCGACTATGG GATTAATTTC 
CCGGGGGCGG CGCTTGAGAC TGAGGGGCCG AGGTCGGGGC AGTGA 

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