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Entry information : BrPrx23-1Aa_other (Bra017120)
Entry ID 4249
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx23-1Aa_other (Bra017120)
Name (synonym) BrPrx23-1Aa_other (Bra017120)
Class Class III peroxidase    [Orthogroup: Prx047]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Roots
Seeds
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx23-1Aa_other
start..stop		 S start..stop
RsPrx02 611 0 1..350 1..350
BrPrx22-1Aa_other 579 0 1..350 1..350
AruPrx23 576 0 1..350 1..349
AruPrx22 574 0 1..350 1..349
Literature and cross-references BrPrx23-1Aa_other (Bra017120)
Literature Kwon,S.J., Yang,T.J., Kim,J.A., Park,J.Y., Kim,J.S., Jin,M., Lim,K.B., Lim,M.H., Choi,B.S., Seol,Y.J. and Park,B.S. Korea Brassica Genome Project (KBGP)
DNA ref. GenBank:   AC189192 (8080..9694)
Cluster/Prediction ref. UniGene:   Bra.11987
Protein sequence: BrPrx23-1Aa_other (Bra017120)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   350 (321)
PWM (Da):   %s   37786.17 (34955.7) Transmb domain:   %s   i13-32o
PI (pH):   %s   7.26 (6.88) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVSRSISCS ALGALILGCL LLQASNSNAQ LRPDFYFRTC PGVFLIVGKV IVEELGSDPR IAASLLRLHF HDCFVNGCDA SVLLDNSTSF RSEKDAAPNA NSARGFDVVD RMKAEIEEVC  PGTVSCADVL AIAAQISVLL SGGPWWPVSL GRRDGSQAFF DLSNTALPSP FATLAELKTV FRDAGLNRTS DLVALSGAHT FGRAQCIVIT PRLYNFNGTN KPDPSINPTF LTQLRKLCPE 
NGNPTVLANF DLATPNRFDS HYYTNLRQGK GVIQSDQELF STPGADTIPL VELYSKNTFE FFKAFAKSMV RMGKLKPLTG TQGEVRLNCR VVNSRTRGVE TEDDGVVSSI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 14 ESTs. Cultivar="Inbred line Chiifu".