The peroxidases and oxidases database
Entry information : BoPrx23-1Ca_other
Entry ID 4250
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx23-1Ca_other
Name BoPrx23-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx23-1Ca_other
start..stop		 S start..stop
RsPrx02 421 2e-150 1..219 1..219
BrPrx23-1Aa_other 414 6e-148 1..219 1..219
TsPrx23 366 6e-129 1..219 1..219
AruPrx23 364 5e-128 1..219 1..219
Literature and cross-references BoPrx23-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G.J. Analysis of EST libraries of Brassica oleracea prepared from different stages of development
EST ref. GenBank:   AM389136 [5' end]
Protein sequence: BoPrx23-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   219 (190)
PWM (Da):   %s   22777.59 (19895.2)  
PI (pH):   %s   7.69 (7.31) Peptide Signal:   %s   cut: 30 range:30-219
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVSRSFSCS AMGALILGCL LLQASNSNAQ LRPDFYFRTC PGVFLIVGKV IVEELGSDPR IAASLLRLHF HDCFVNGCDA SVLLDNSTSF RTEKDALPNL NSARGFGVVD KMKAEIERAC 
PRTVSCADVL AIAAQISVLL SGGPWWPVSL GRRDGSQAFF DLSNTALPSP FATLAELKTV FSDAGLNRTx xxVALSGAHT FGxxQCIVIT PRLYNFNGT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' end is missing. Variety="alboglabra".