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Entry information : BoPrx23-1Ca_other
Entry ID 4250
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx23-1Ca_other
Name BoPrx23-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx23-1Ca_other
start..stop		 S start..stop
RsPrx02 421 1.55e-150 1..219 1..219
BrPrx23-1Aa_other 414 5.96e-148 1..219 1..219
TsPrx23 366 5.83e-129 1..219 1..219
AruPrx23 364 4.91e-128 1..219 1..219
Literature and cross-references BoPrx23-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G.J. Analysis of EST libraries of Brassica oleracea prepared from different stages of development
EST ref. GenBank:   AM389136 [5' end]
Protein sequence: BoPrx23-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   219 (190)
PWM (Da):   %s   22777.59 (19895.2)  
PI (pH):   %s   7.69 (7.31) Peptide Signal:   %s   cut: 30 range:30-219
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVSRSFSCS AMGALILGCL LLQASNSNAQ LRPDFYFRTC PGVFLIVGKV IVEELGSDPR IAASLLRLHF HDCFVNGCDA SVLLDNSTSF RTEKDALPNL NSARGFGVVD KMKAEIERAC 
PRTVSCADVL AIAAQISVLL SGGPWWPVSL GRRDGSQAFF DLSNTALPSP FATLAELKTV FSDAGLNRTx xxVALSGAHT FGxxQCIVIT PRLYNFNGT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' end is missing. Variety="alboglabra".