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Entry information : PtaPrx54
Entry ID 4269
Creation 2006-12-27 (Christophe Dunand)
Last sequence changes 2006-12-27 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2021-05-17 (Christophe Dunand)
Peroxidase information: PtaPrx54
Name PtaPrx54
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Roots
Stems
Inducers Cold stress
Flooded treatment
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx54
start..stop		 S start..stop
PpPrx04 669 0 1..333 1..333
PgPrx06 645 0 1..333 1..333
PabPrx93 645 0 1..333 1..333
PsiPrx02 644 0 1..333 1..333
Literature and cross-references PtaPrx54
Literature Pratt, Lee, Cordonnier-Pratt, Marie-Michele, Lorenz,W. Walter, Zimmermann, Craig, Chhabra, Disha and Dean,Jeffrey F. D. EST database from cold-treated loblolly pine (Pinus taeda) roots
Cluster/Prediction ref. UniGene:   Pta.18780
Protein sequence: PtaPrx54
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (302)
PWM (Da):   %s   36073.12 (32916.4)  
PI (pH):   %s   8.08 (7.68) Peptide Signal:   %s   cut: 32 range:32-333
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSKTIVRKP LELAGFVICV LLGLCVSNGS AQLSENFYAK ICPNVESIVR NVVSQKFTQT FVTVPGTLRL FFHDCFVEGC DASVIIQSTS NNTAEKDFSD NLSLAGDGFD TVIKAKQAVE  KVCPNSVSCA DILTMAARDV VALAGGPQFN VELGRRDGLI SQASRVNGNL PKASFTLNQL NFLFARKGLS QTDMVALSGA HTLGFSHCNQ IANRIYSFSA STPVDPSLNA SYATQLQQMC 
PKNVDPTIAI NIDPTTPRKF DNVYYQNLQS GKGLFSSDEV LYTDLRTRNA VNKFAQSSDT FNTAFVSAMR NLGRVDVKTG FQGEIRQDCS RFN 

Retrieve as FASTA  
Remarks Complete sequence from 24 ESTs and genomic (tscaffold7100). No prediction found.