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Entry information : AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Entry ID 4353
Creation 2007-01-18 (Christophe Dunand)
Last sequence changes 2015-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-09 (Achraf Jemmat)
Peroxidase information: AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Name (synonym) AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue types Buds
Mixed tissues
Roots
Siliques
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtPrxII05
start..stop		 S start..stop
AlyPrxII05 446 7.63e-162 1..234 1..231
TsPrxII05 405 7.3e-146 15..234 16..235
ThasPrxII02 347 1.1e-122 22..234 22..232
LuPrxII02 291 1.18e-100 1..234 1..230
Gene structure Fichier Exons►


exon

Literature and cross-references AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Literature EU Arabidopsis sequencing, project
Protein ref. UniProtKB:   Q9LF96  Q949U7 [Mismatch]
DNA ref. Phytozome 12:   Chr3 (19639699..19640403)
Cluster/Prediction ref. Phytozome Gene 12:   19659150 UniGene:   At.9858
Omic ref. AtProteome:   At3g52960 ATTED-II:   At3g52960 e-FP Browser:   At3g52960 ePlant:   At3g52960 Genevestigator:   At3g52960 TAIR:   At3g52960
Protein sequence: AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   234 (230)
PWM (Da):   %s   24555.8 (24317.3) Transmb domain:   %s   o335-354i475-497o517-539i701-718o
PI (pH):   %s   9.57 (8.19) Peptide Signal:   %s   cut: 32 range:32-261
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS SLTAGKKTIL FAVPGAFTPT 
CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron), 7 cDNA and 84 ESTs. Two TREMBL accession Q9LF96 and Q949U7 (one mismatch).
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DNA ►
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cDNA►
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