Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
234 |
PWM (Da): |
24555.8 |
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PI (pH):
| 9.57 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS SLTAGKKTIL FAVPGAFTPT
CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 3, no intron), 7 cDNA and 84 ESTs. Two TREMBL accession Q9LF96 and Q949U7 (one mismatch). |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TTCTTATGAT TTTCTCATCA ATTTCGTCTT CTTCTCTGTT TTGAATTTTC TTTACTCTGT TTTGTGTTGC TGTTTCTTTA AATCTACGAA TCATTATCGG ATTTGTAATG GAATAATGAA
GTTAGAGGTT CTGTTGTTTG TGAACATTTT AGAAAAGCGT TGTGTTTAGT TTTCGGATGT TACTACTTTT GGTTAATTTT TTCTCTTTTG ACTTTTATAA TTTTGATTGA GTTTAGGTAT
TAACCTAACA CTTACTGATA GTTTGTCACA GTGACAAGTT AATATAAACA TGTAATGAAA ATTTTCCACT TAAAAATTCA TGAAATAGAG CTATTAATTT CTAGAAAAAG TTAACTTATC
GAAGTCGGGT TCTCTGAAAC GTGTTGCTGA TCACCGGTCG GTCAGGGATT TGGTCCGGAG TAAGTCTTAT GATATGGAGA GGTTTTGACC ATAAAATCCT CTTGGTAAAA CATTAGTAAG
ATACCAACCC AAAGACCTCT CCAAAAGGCA CGTTTTTTTA TTATTATACT ACTTGACATG ATCCTTTTTT TTTCCTCGGT GCATCTTTGA TATGATTATC TTAAGTTTAA GGAGCATAAT
GAATTACCTT TTCAATTGAT CTATGTAGAG TAATGGAGAT TGGAGACCAA CAAGCAACAA TCCTGACTTT TGGAAAGGAC GTTGGGGTTG GTTGCTAGTT GGATGCCACG TCTACGTGCT
AACGTATGCA TTGATGCACA AATAGCGAAA AACTTTAGTT TATATCCTTT TTTTTATAAC AAAACAGACA ATAAAGCCCA AATGTGGTCA GCTTCACTAC TGGATCGGCT ATGTCAGTTT
ACCGAATCAA ATCTCCCACA ATAACGCCAA ATTATTCTTA GATATTTTTT TCTTTTTCTT TTGGGTACAA ATATCGGATT GCTTTGATGA TTTGAAGTGT TCAAGTACAC TGTACACATG
CATGTAAAGA AAACAAAGAG AAAAGAAGAA AAGAAATTAA G
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGACTT CTCTCTCCGT TTCTAGATTC ATGTCCTCCT CCGCCACCGT TATCTCCGTC GCTAAGCCGT TACTTTCCCC CACCGTATCC TTCACCGCGC CGCTCTCCTT CACACGCTCT
CTCGCTCCTA ATCTCTCTCT CAAATTCCGC AACCGCCGCA CCAATTCCGC CTCCGCCACC ACCAGATCCT TCGCTACGAC ACCCGTCACC GCCTCCATTT CCGTCGGAGA CAAGCTCCCA
GACTCCACTC TCTCCTACCT CGATCCATCC ACCGGAGACG TCAAAACAGT AACCGTCTCA TCCCTAACCG CCGGGAAGAA AACAATCCTA TTCGCCGTTC CCGGCGCATT CACACCAACA
TGCTCACAAA AACACGTCCC TGGATTCGTA TCCAAAGCCG GAGAACTCAG ATCTAAAGGC ATCGATGTAA TCGCATGTAT CTCCGTCAAC GACGCGTTCG TGATGGAAGC GTGGAGGAAA
GATCTTGGAA TTAACGATGA GGTAATGTTG CTATCCGATG GAAATGGCGA ATTCACAGGG AAGCTTGGTG TTGAATTGGA TTTGAGGGAT AAGCCTGTGG GACTTGGAGT TAGGTCAAGG
AGATATGCGA TTTTGGCTGA TGATGGTGTT GTGAAAGTTC TGAATCTTGA AGAAGGAGGT GCTTTTACTA ATAGTAGTGC TGAGGATATG CTTAAAGCTC TCTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGACTT CTCTCTCCGT TTCTAGATTC ATGTCCTCCT CCGCCACCGT TATCTCCGTC GCTAAGCCGT TACTTTCCCC CACCGTATCC TTCACCGCGC CGCTCTCCTT CACACGCTCT
CTCGCTCCTA ATCTCTCTCT CAAATTCCGC AACCGCCGCA CCAATTCCGC CTCCGCCACC ACCAGATCCT TCGCTACGAC ACCCGTCACC GCCTCCATTT CCGTCGGAGA CAAGCTCCCA
GACTCCACTC TCTCCTACCT CGATCCATCC ACCGGAGACG TCAAAACAGT AACCGTCTCA TCCCTAACCG CCGGGAAGAA AACAATCCTA TTCGCCGTTC CCGGCGCATT CACACCAACA
TGCTCACAAA AACACGTCCC TGGATTCGTA TCCAAAGCCG GAGAACTCAG ATCTAAAGGC ATCGATGTAA TCGCATGTAT CTCCGTCAAC GACGCGTTCG TGATGGAAGC GTGGAGGAAA
GATCTTGGAA TTAACGATGA GGTAATGTTG CTATCCGATG GAAATGGCGA ATTCACAGGG AAGCTTGGTG TTGAATTGGA TTTGAGGGAT AAGCCTGTGG GACTTGGAGT TAGGTCAAGG
AGATATGCGA TTTTGGCTGA TGATGGTGTT GTGAAAGTTC TGAATCTTGA AGAAGGAGGT GCTTTTACTA ATAGTAGTGC TGAGGATATG CTTAAAGCTC TCTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAGTCACACA CTCTTCACCT AAACAGCATC AATGGCGACT TCTCTCTCCG TTTCTAGATT CATGTCCTCC TCCGCCACCG TTATCTCCGT CGCTAAGCCG TTACTTTCCC CCACCGTATC
CTTCACCGCG CCGCTCTCCT TCACACGCTC TCTCGCTCCT AATCTCTCTC TCAAATTCCG CAACCGCCGC ACCAATTCCG CCTCCGCCAC CACCAGATCC TTCGCTACGA CACCCGTCAC
CGCCTCCATT TCCGTCGGAG ACAAGCTCCC AGACTCCACT CTCTCCTACC TCGATCCATC CACCGGAGAC GTCAAAACAG TAACCGTCTC ATCCCTAACC GCCGGGAAGA AAACAATCCT
ATTCGCCGTT CCCGGCGCAT TCACACCAAC ATGCTCACAA AAACACGTCC CTGGATTCGT ATCCAAAGCC GGAGAACTCA GATCTAAAGG CATCGATGTA ATCGCATGTA TCTCCGTCAA
CGACGCGTTC GTGATGGAAG CGTGGAGGAA AGATCTTGGA ATTAACGATG AGGTAATGTT GCTATCCGAT GGAAATGGCG AATTCACAGG GAAGCTTGGT GTTGAATTGG ATTTGAGGGA
TAAGCCTGTG GGACTTGGAG TTAGGTCAAG GAGATATGCG ATTTTGGCTG ATGATGGTGT TGTGAAAGTT CTGAATCTTG AAGAAGGAGG TGCTTTTACT AATAGTAGTG CTGAGGATAT
GCTTAAAGCT CTCTGATTCT TATGATTTTC TCATCAATTT CGTCTTCTTC TCTGTTTTGA ATTTTCTTTA CTCTGTTTTG TGTTGCTGTT TCTTTAAATC TACGAATCAT TATCGGATTT
GTAATGGAAT AATGAAGTTA GAGGTTCTGT TGTTTGTGAA CATTTTAGAA AAGCGTTGTG TTTAGTTTTC GGATGTTACT ACTTTTGGTT AATTTTTTCT CTTTTGACTT TT
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Retrieve as FASTA
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