Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
162 |
PWM (Da): |
17347.94 |
|
PI (pH):
| 5.23 |
|
Sequence 233
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (chromo 1, 2 introns), 5 cDNA and 11 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GAAACATTAT CATTCGCTTG TTGTATTGTG AATCTAAACC GCTGTATGTG AAGAAGAGAA TTATATAGCC TGATTTCAAT CAACAAGCAA GTGTATTGAC TTGCTTGGCA TAATAAAGTA
TTTGGTTTTA ATGTTTTTCT TTGCGTTGAT TCATGAAAGA TATGAGTACT TAAAATGAGT TGCAACCTTA TAGAAATCCA CAATAACTGG CTCAAATAGA GATACGAACA CAGAAACGCA
AAGTCCTCAC AAGTACCTCT TTAATATAGA GTCTTTATTA ACAAACAAAC ACAAAGTAAA CTTGCTTTGT ACAAAACCTT TATTCTTTCT AAGGCATTAT TGGCTCTTTC TTATTGCAAA
CTCGCACACC TATATACTTA ACTTATTTCA CACACACAGA GATACATCTT CAGCACAATT TTACCGCGAT TTGGCGAATG CGGTATACCC TCAAAACAGT TTCCAAACAT GTATTTTATC
TTGCTTTCCA AGAAGACAAT GGTGGAGTCT CTGAGTCTTT GTAAGTAACC ATGTTGTTGT CATACCGTTC ACCTTTCACG AAATCCGGTT GAGCAATGGC TTCAAGCTCA ACCATCTCTT
CAGGAGTGAG CTTCACGGAT AAAGCTCCAA TGTTTTGGTT GAGGTTTTGG ATCTTGGAGG TTCCTGGAAT TGGACATACA TCATCTCCTT GATGGTGAAC CCACGCTAGA GCTAGTTGTG
CAGGAGTGCA ACTTTTCTTT GTCGCCATCG CTTGGACTTT CTCGTAGAGA ATCTTGTTGT TTTCTAGATT CTCCTGTTGG AATCTTGGTA AACCCTGTGA CAGAGTAGTA TCAAGAAGCA
TGAGATGACT CCAAATCTTG AAATATGCTT TAAAGAACTC ATATACAATG TATGTATACG GAAACAGAGA ACTGAATCAA TCATGCACTT GGCTTTCGAT AATCATCTTG CTCTAGATTC
TCAACAATCT TGGTCCGGAT GCTAAGAAGC CTCTTCCTAG
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTCCAATTACTGTCGGCGATGTTGTACCAGACGGAACTATCTCTTTCTTCGATGAAAATGATCAGCTTCAGACCGTCTCTGTTCACTCTATCGCCGCCGGTAAAAAAGTCATTCTC TTTGGTGTTCCTGGTGCTTTCACTCCCACATGCAGGTACAAAGTTTCAAACGCTTTTTCAGATTTATCCTTTGATGCTAAGCTGATGGATTCTTAGATTTTGATTTGAGAATTGGCGTTT TTGGTTTTTCTGAGGTTAGCATGAGCCATGTGCCTGGATTCATTGGGAAAGCAGAGGAGCTGAAGTCAAAGGGTATCGATGAGATCATTTGCTTTAGTGGTAAGTATGAATATTGATATG TTTTGGATCTCTACTCTATTCTTGCCTCTATGAGTTTGTGTATAGTGACCAAAAAATGTTGAATGCATTTGTTGCAGTGAATGATCCATTTGTGATGAAGGCATGGGGAAAGACATACCA AGAGAACAAGCATGTGAAGTTTGTAGCAGATGGGTCTGGAGAATACACACATCTTCTTGGACTTGAGCTTGATCTCAAGGACAAGGGTCTTGGTATTAGGTCAAGGAGATTTGCTCTGTT GCTTGATAACCTTAAGGTAACTGTAGCCAATGTCGAAAATGGTGGCGAGTTCACGGTTTCCAGCGCAGAGGATATCCTTAAGGCTCTCTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTCCAATTACTGTCGGCGATGTTGTACCAGACGGAACTATCTCTTTCTTCGATGAAAATGATCAGCTTCAGACCGTCTCTGTTCACTCTATCGCCGCCGGTAAAAAAGTCATTCTC TTTGGTGTTCCTGGTGCTTTCACTCCCACATGCAGCATGAGCCATGTGCCTGGATTCATTGGGAAAGCAGAGGAGCTGAAGTCAAAGGGTATCGATGAGATCATTTGCTTTAGTGTGAAT GATCCATTTGTGATGAAGGCATGGGGAAAGACATACCAAGAGAACAAGCATGTGAAGTTTGTAGCAGATGGGTCTGGAGAATACACACATCTTCTTGGACTTGAGCTTGATCTCAAGGAC AAGGGTCTTGGTATTAGGTCAAGGAGATTTGCTCTGTTGCTTGATAACCTTAAGGTAACTGTAGCCAATGTCGAAAATGGTGGCGAGTTCACGGTTTCCAGCGCAGAGGATATCCTTAAG GCTCTCTAA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAGTCAAAAC TCTTCTATTT TCCCCTGTCT TCATATCCAA CAGAGATCTC TTCATGGCTC CAATTACTGT CGGCGATGTT GTACCAGACG GAACTATCTC TTTCTTCGAT GAAAATGATC
AGCTTCAGAC CGTCTCTGTT CACTCTATCG CCGCCGGTAA AAAAGTCATT CTCTTTGGTG TTCCTGGTGC TTTCACTCCC ACATGCAGCA TGAGCCATGT GCCTGGATTC ATTGGGAAAG
CAGAGGAGCT GAAGTCAAAG GGTATCGATG AGATCATTTG CTTTAGTGTG AATGATCCAT TTGTGATGAA GGCATGGGGA AAGACATACC AAGAGAACAA GCATGTGAAG TTTGTAGCAG
ATGGGTCTGG AGAATACACA CATCTTCTTG GACTTGAGCT TGATCTCAAG GACAAGGGTC TTGGTATTAG GTCAAGGAGA TTTGCTCTGT TGCTTGATAA CCTTAAGGTA ACTGTAGCCA
ATGTCGAAAA TGGTGGCGAG TTCACGGTTT CCAGCGCAGA GGATATCCTT AAGGCTCTCT AAGAAACATT ATCATTCGCT TGTTGTATTG TGAATCTAAA CCGCTGTATG TGAAGAAGAG
AATTATATAG CCTGATTTCA ATCAACAAGC AAGTGTATTG ACTTGCTTGG CATAATAAAG TATTTGGTTT TAATGTT
|
Retrieve as FASTA
|
|