Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
216 |
PWM (Da): |
23979.19 |
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PI (pH):
| 6.6 |
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Sequence 312
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MPGITLGDTVPNLEVETTHDKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEAFHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTTGRNMDEVLRALDSLLMASKHNNKIATPVNWKPDQPVVISPAVSDEEAKKMFPQGFKTADLPSKKGYLRHTEVS* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, 3 introns), 5 cDNA and 20 ESTs. Four TREMBL accessions: O04005, Q84WE3 (1 mismatch), Q42319 (fragment and 3 mismatches) and Q42320 (fragment and 1 mismatch).
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Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAGATAATAA CAAAAGCCTA CTATATAACG TACATGCAAG TATTGTATGA TATTAATGTT TTTACGTACG TGTAAACAAA AATAATTACG TTTGTAACGT ATGGTGATGA TGTGGTGCAC
TAGGTGTAGG CCTTGTATTA ATAAAAAGAA GTTTGTTCTA TATAGAGTGG TTTAGTACGA CGATTTATTT ACTAGTCGGA TTGGAATAGA GAACCGAATT CTTCAATCCT TGCTTTTGAT
CAAGAATTGA AACCGAATCA AATGTAAAAG TTGATATATT TGAAAAACGT ATTGAGCTTA TGAAAATGCT AATACTCTCA TCTGTATGGA AAAGTGACTT TAAAACCGAA CTTAAAAGTG
ACAAAAGGGG AATATCGCAT CAAACCGAAT GAAACCGATA TGAAACCGCA TCAAACCGAT ATAGCGTGAA CCAAAATGTG GATTAATGAC ATTTAGACCG GAGGAACATA AGTGGGGACT
ATACGGCATC GTTTTAGTGT ATAAGTGAAT TCGCATATTC ACGAGTTCCC CGTATTCACC GGTTGTTATA TCGTCGATTC ATCGTCGTCG ACGGCGAGTA CTTGTGACCT CCACACCCAG
ATTAATCTTC TATAACTGAT TTTATCGCTT AGACGATCAC GATCTCATCG ATTAACTGTG AGTATAATCG ATTCCTCCTC TTTATTTTGT GTGTTGTATC GATTTACGAT AATTTTTTGG
AGGAACATCT CCTTTCGGAT CGGTTTTGTT GGGAATTTAT ATTTCTTTGC CATGGTTTTA TCTTGATTTG GTGATTTACC TTGTGTTTGT TCTGGTGTAC TATTTAGCTA ATTTAGTATA
AGCTTTCAGA TGATTCTAGG AAACTTTTGT GCTACTGTTT TCGGTTTTTG GTGATAGAAC TATGTAGTTT TAAGGAACCA TATAAAAATT TCGTCTAGAA ATGTTTCTAT GGTTACTGAT
CAGTCATCAG TGGTAGCGAT ATGAAATTGG AATCCTGTTT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCAGGGATCACACTAGGAGACACGGTGCCGAACCTAGAAGTGGAGACGACACATGACAAGTTCAAACTTCATGACTACTTCGCCAATTCTTGGACCGTCCTCTTCTCTCATCCCGGT ATATATGTTAATATATAGATCTTGAGTTCTTGACTTCTGTTGCAATTCCTTTTTTGTTTTCTTGATTTTTGTTGACGGTCACACAGGGGATTTCACACCCGTGTGCACCACGGAGCTTGG TGCGATGGCCAAATACGCTCATGAGTTCGATAAGAGAGGCGTGAAGCTCCTTGGTCTGTCTTGTGACGATGTACAGTCACACAAAGACTGGATCAAAGATATTGAAGCCTTTAATGTATA ATTTAAATCTCATGCATGCATATACCAGACTAGCTAGAGATCATATTTTGGTTTTGATTAATTTGTTACATATGTATGATATAGCACGGAAGCAAGGTGAATTACCCGATAATCGCTGAC CCGAACAAAGAGATCATTCCTCAGCTTAACATGATTGATCCAATTGAGAACGGACCGTCTCGTGCCCTTCATATTGTTGGTCCTGACAGTAAGGTAATAATTTCATATATTATTGCATGT ATGATTTTATTGGTTAATTGGATTTGTGATATATAGATAAAATTGAGCTTCTTGTATCCGTCGACCACGGGACGTAACATGGACGAAGTATTGAGGGCTTTAGACTCGTTGTTGATGGCG TCCAAGCACAATAACAAGATCGCCACTCCGGTTAACTGGAAGCCAGATCAACCGGTTGTGATTTCGCCTGCTGTGTCGGACGAGGAAGCCAAAAAGATGTTCCCACAGGGTTTCAAGACC GCCGATCTTCCGTCAAAGAAAGGCTATCTGCGTCACACAGAGGTCTCTTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCAGGGATCACACTAGGAGACACGGTGCCGAACCTAGAAGTGGAGACGACACATGACAAGTTCAAACTTCATGACTACTTCGCCAATTCTTGGACCGTCCTCTTCTCTCATCCCGGG GATTTCACACCCGTGTGCACCACGGAGCTTGGTGCGATGGCCAAATACGCTCATGAGTTCGATAAGAGAGGCGTGAAGCTCCTTGGTCTGTCTTGTGACGATGTACAGTCACACAAAGAC TGGATCAAAGATATTGAAGCCTTTAATCACGGAAGCAAGGTGAATTACCCGATAATCGCTGACCCGAACAAAGAGATCATTCCTCAGCTTAACATGATTGATCCAATTGAGAACGGACCG TCTCGTGCCCTTCATATTGTTGGTCCTGACAGTAAGATAAAATTGAGCTTCTTGTATCCGTCGACCACGGGACGTAACATGGACGAAGTATTGAGGGCTTTAGACTCGTTGTTGATGGCG TCCAAGCACAATAACAAGATCGCCACTCCGGTTAACTGGAAGCCAGATCAACCGGTTGTGATTTCGCCTGCTGTGTCGGACGAGGAAGCCAAAAAGATGTTCCCACAGGGTTTCAAGACC GCCGATCTTCCGTCAAAGAAAGGCTATCTGCGTCACACAGAGGTCTCTTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TTGCGATCTC TATTTAATCG GTCCTCGACG CAACTTCAAC TTCTACTACA TCCATTCACA TCAAATCAAT ACAGAAAGTT TTTTCTATAT ATAAATATAA AAGGTAAAAT GCCAGGGATC
ACACTAGGAG ACACGGTGCC GAACCTAGAA GTGGAGACGA CACATGACAA GTTCAAACTT CATGACTACT TCGCCAATTC TTGGACCGTC CTCTTCTCTC ATCCCGGGGA TTTCACACCC
GTGTGCACCA CGGAGCTTGG TGCGATGGCC AAATACGCTC ATGAGTTCGA TAAGAGAGGC GTGAAGCTCC TTGGTCTGTC TTGTGACGAT GTACAGTCAC ACAAAGACTG GATCAAAGAT
ATTGAAGCCT TTAATCACGG AAGCAAGGTG AATTACCCGA TAATCGCTGA CCCGAACAAA GAGATCATTC CTCAGCTTAA CATGATTGAT CCAATTGAGA ACGGACCGTC TCGTGCCCTT
CATATTGTTG GTCCTGACAG TAAGATAAAA TTGAGCTTCT TGTATCCGTC GACCACGGGA CGTAACATGG ACGAAGTATT GAGGGCTTTA GACTCGTTGT TGATGGCGTC CAAGCACAAT
AACAAGATCG CCACTCCGGT TAACTGGAAG CCAGATCAAC CGGTTGTGAT TTCGCCTGCT GTGTCGGACG AGGAAGCCAA AAAGATGTTC CCACAGGGTT TCAAGACCGC CGATCTTCCG
TCAAAGAAAG GCTATCTGCG TCACACAGAG GTCTCTTGAA AAGATAATAA CAAAAGCCTA CTATATAACG TACATGCAAG TATTGTATGA TATTAATGTT TTTACGTACG TGTAAACAAA
AATAATTACG TTTGTAACGT ATGGTGATGA TGTGGTGCAC TAGGTGTAGG CCTTGTATTA ATAAAAAGAA GTTTGTTCTA TATAGAGTGG TTTAGTACGA CGATTTATTT ACTAGTCGGA
TTGGAATAGA GAACCGAATT CTTCAA
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Retrieve as FASTA
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