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Entry information : PtroPrxV
Entry ID 4449
Creation 2007-01-25 (Filippo Passardi)
Last sequence changes 2007-01-25 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-11-23 (Myriam Duval (Scipio))
Peroxidase information: PtroPrxV
Name PtroPrxV
Class Atypical 2-Cysteine peroxiredoxin (type V)    [Orthogroup: PrxV001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation Mitochondria
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroPrxV
start..stop		 S start..stop
GgoPrxV 423 1.39e-153 1..214 1..214
HsPrxV 421 1.29e-152 1..214 1..214
PpyPrxV 418 1.85e-151 1..214 1..216
PabePrxV 416 1.28e-150 1..214 1..217
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4449' 'join(62721080..62721250,62722922..62723056,62723848..62723979,62724052..62724090,62724194..62724255,62724707..62724812)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 62721080..62721250 169 N° 2 62722922..62723056 133 N° 3 62723848..62723979 130 N° 4 62724052..62724090 37
N° 5 62724194..62724255 60 N° 6 62724707..62724812 104  
join(62721080..62721250,62722922..62723056,62723848..62723979,62724052..62724090 ,62724194..62724255,62724707..62724812)


exon

Literature and cross-references PtroPrxV
Protein ref. GenPept:   XP_001164621
DNA ref. GenBank:   NC_006478.2 (62721080..62724812)
Protein sequence: PtroPrxV
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   214
PWM (Da):   %s   21827.39  
PI (pH):   %s   9.07
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGGWASGGVRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGV
QVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL

Retrieve as FASTA  
Remarks Complete sequence Genomic (Chromo 11, 5 introns). No EST. Four other transcript variants predicted, but this one (variant 5) gives a full PrxV with high identity to the other PrxV.
DNA ►
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGACTAGCTGGCGTGTGCGCCCTGAGACGCTCAGCGGGCTATATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTGCAGTGAAGGAGGGTGGGCGTCT
GGCGGGGTCCGCAGTTTCAGCAGAGCCGCTGCAGCCATGGCCCCAATCAAGAGGTGACCGCTGGCCCGGCCGGGCCTGACATCCCCCACTACCCTCATGGCAATCCCCGTCCCGCTGGTC
TGAGAGTATCGCCTTATTTCCTGCCTGCCAGACCCCTCCCCGCCGCCCGCCCGGTTCATCCCTTTCAAGGCCCTTTTTGCTGCCACCTTACTCGCAAATAATGGGGGACTAAACTCCGTG
GACATTTCTTCTCCTTTTGTTTTTGTCTTTTTTTTTTTTTGAGATGTATTCTTTTTTCCCTCCTGTGTGTGTGAGTGAAATAACCTCTTTTTTGCTCCCCGCCCCCTCTGCTTTGGGGGT
TCCCAACTATACTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTGGATTCCTGATTTCCCCTATCTTCTGAAACAGCTGTCCCTTAGCGCCCCCGCGGGGGCTTCCCCCATCCCACT
CCACGACCTCCCCTCCCCCCATGGCGAATTCCCACCTTTTTGTCTTGTCTTTCACTCACTTCCTGGAACCGTCCCCAGGGCCTTGGACCTTCCCCCTTCTCCTCCCAAACCTTGTGAGAC
CCCATTCCCTTTCTACTTCATCCTGCTCTCAACCTTTGGGCTCCTCAGAGGCCCTCACCTCTGACTCTCTCTCCCTACCCACTCTGGTCCCATGAAGCCCTCAAGTACTCTGGGGATGGA
TCCTTCCCCCTTCAAAAGATTCCTTCTTTTGTTCTACACCTCCTGGGTGTAGGGGCCTGGACACCCTCCCCCAACGTTCCACCTGCCGCTGCCCTTCCTCTTCCTCCTCCTGAGGGTGGG
ACCCTCAGACCTGGCCAAGATCCTCTCCCTCCATGTTGTCAGGGATTCCTCCTCACCCCCAAATACAGCCCTCTAGCCCCTGTCCATTTTATTCCACTCCTTTCCTGTAACCTAGACAGC
ATGTTATGCAACCCTTTGCGACACATGGGGAAACCTTCCCTCCCTTTCTCTGTTGTCACCAATGGCCCCTTAAGAGGAGCAGGGCCACCGTGAAACTTGGAGGATATGGGGTAACCCAGT
GGGAGCGGGCAGGGAGGGCCCTTGGAAACTGACAGGGCTGGAGTATCCTGCTGGGTTTCAGCCCCGGTTCCTGCAGGCACAGCTGCCAGGCTCTCTGTTCACCTTCCTGCCTCTGGTTTG
CCCCGGCTCCCTCACCCCACTTACCCTGGAGTCCTTCCTTCTAGGTGGGAGATGCCATCCCAGCAGTGGAGGTGTTTGAAGGGGAGCCAGGGAACAAGGTGAACCTGGCAGAGCTGTTCA
AGGGCAAGAAGGGTGTGCTGTTTGGAGTTCCTGGGGCCTTCACCCCTGGATGTTCCAAGAGGTGAGGCCCTTCCCCTTCTGAAGATCAGGACCTGGGATCTTTTGTGTTGCTCTTAAGTC
CTCCACATAGTCCTGATAGGACTCCTAAAAAGCATTTCAGTGCCATCAGAAAACAAGTAGAGCTGGGTAGAGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA
GGCGGGTGGATCACGAGGTCAGGAGTTCAAAACCAGCCTGGCCAAGATGGTGAAACCCTGTCTCTACTAAAAATGCAAAAAAAATCAGCCGGACATGGTGGCGGGCGCCTGTAATCCCAG
GTACTGGGGAGGCTGAGGCAGAGAATTGCTTGAACCTAGGAGGCGTAGGTTGCAGTGAGTGGAGATCGTGCCTCTGCAGTCCAGCCTGGGTGAAAGAGCGAGACTCCGTCTCAAAATAAA
AAAAAAAAAAGAAAACAAGTAGAGACTGCAAAAAGGGAACAGTACCAGGAATGTTGGAGAAAAACATACTACAATTAAATCCAACACCCCTGTTGGTCCTGCTAAATGACAGGCACTGTG
GAAGGTGCTTGGGACTCAGATAAATAAAACATAGATCTGCCCATGGAAAGTTCACGTCTGGACCATAAGGCATTAGGTTTCATTCTGAGCTTCCTAATGGCCAAGGCAAAAAGGAAATAG
AATGGTTTGGACAGCTCTCCTTGTCTGATCAAAGGTGTTGAGGCAGAGCACTGAGGAGGGCCTGGAGATAACGGGTGGGCTGGGGGTCAGATGCAGTTATCCCTTTGCCGACCATTTGTT
CCCCTTCCTCAGACCCACCTGCCAGGGTTTGTGGAGCAGGCTGAGGCTCTGAAGGCCAAGGGAGTCCAGGTGGTGGCCTGTCTGAGTGTTAATGATGCCTTTGTGACTGGCGAGTGGGGC
CGAGCCCACAAGGCGGAAGGCAAGAGGTGAGGTGCGGGGCCTGCAGGGAGTCAGGACCAGGTAGGATATTCTTCTTGTGACCTTTACTTTCTCTGCAGGTTCGGCTCCTGGCTGATCCCA
CTGGGGCCTTTGGGAAGAGGTGAGTGTTCCCCTGACCGCCACAGGGACATGGCAGTGCGGGGAGCAGTGGGGGCCCTTGGCCTCTTCAAGGATTTCTGACACTTTTCTCTGTCTCTTCTT
AGGAGACAGACTTATTACTAGATGATTCGCTGGTGTCCATCTTTGGGAATCGACGTCTCAAGAGAGGTAAAAGTGGAGAGTCCTCTGTGGAGAGAGTCCTCTGTGGGAGAGAGTCCTCTG
TGGAGAGGGTCCTCTGTGGGAAGAGTCATCTGTGGGGGAGAGTCCTCTGTGTGGGAGAGTCGTCTGTGGGGAGAGTCCTGTGTGGGGAGAGTCCTCTGTGGAGAGAGTCCTCTGTGGGGG
AGAGTCCTGTGTGGGGGAGAGTCCTCTGTGGGGAGAGTCCTCTGTGTGGAGAGAGTCCTGTGTGGGAGAGAGTCCTGTGTGGGGGAGAGTCCTCTGTGGGGAGAGTCCTCTGTGTGGAGA
GAGTCGTGTGTGGTGGTGAGTCCTCTGTGGGGGAGAGTCCTCTGTGGGGGGAGTCCTCTCTGGAGTTCTCTTGGGCCCCTGGCTGTTCACTGCCTGTCTCCATGCCCAGTCTCCAGGCCC
AGGCTGATGCAGCTGGCTGGGCCCCTCTTTCCGGCAGGTTCTCCATGGTGGTACAGGATGGCATAGTGAAGGCCCTGAATGTGGAACCAGATGGCACAGGCCTCACCTGCAGCCTGGCAC
CCAATATCATCTCACAGCTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGACTAGCTGGCGTGTGCGCCCTGAGACGCTCAGCGGGCTATATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTGCAGTGAAGGAGGGTGGGCGTCT
GGCGGGGTCCGCAGTTTCAGCAGAGCCGCTGCAGCCATGGCCCCAATCAAGGTGGGAGATGCCATCCCAGCAGTGGAGGTGTTTGAAGGGGAGCCAGGGAACAAGGTGAACCTGGCAGAG
CTGTTCAAGGGCAAGAAGGGTGTGCTGTTTGGAGTTCCTGGGGCCTTCACCCCTGGATGTTCCAAGACCCACCTGCCAGGGTTTGTGGAGCAGGCTGAGGCTCTGAAGGCCAAGGGAGTC
CAGGTGGTGGCCTGTCTGAGTGTTAATGATGCCTTTGTGACTGGCGAGTGGGGCCGAGCCCACAAGGCGGAAGGCAAGGTTCGGCTCCTGGCTGATCCCACTGGGGCCTTTGGGAAGGAG
ACAGACTTATTACTAGATGATTCGCTGGTGTCCATCTTTGGGAATCGACGTCTCAAGAGGTTCTCCATGGTGGTACAGGATGGCATAGTGAAGGCCCTGAATGTGGAACCAGATGGCACA
GGCCTCACCTGCAGCCTGGCACCCAATATCATCTCACAGCTCTGA

Retrieve as FASTA