Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
200 |
PWM (Da): |
22018.29 |
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PI (pH):
| 4.83 |
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Sequence 342
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVAQVQKPAPTFKAQAVVDGVFQDVSLSDYLGQWVVLFFYPMDFTFVCPTEILAFNDSLEAFKELNTVVGVSTDSAYSHFAWASQPRNQGGLGPNLKLPLIADRNMKISRDYGVLLEEDGVALRGLFIIDPKGVLRQITVNDLPVGRSVDETIRLIKAFQFEKYGEVCPANWKEGGKTMKADPKGSLEYFSTVNTNAQ |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns), cDNA and 4 ESTs (DV758150, DV755748, DV759024, DV755438). Strain="RP-78". Alternative splicing with an extra intron (and very short last exon) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTCGCTCAGGTCCAGAAGCCCGCCCCCACCTTCAAGGCTCAGGCCGTTGTCGACGGTGTCTTCCAGGATGTCTCTCTTTCCGACTACCTCGGCCAATGGTATGTTGCACTACATTGC AAACGTACGGCTCGCTAATATCGCACAGGGTCGTCCTCTTCTTCTACCCCATGTGAGTTGCAAACGACGCGTCAAATCTGACATGCCACTAACATGTCATCAGGGACTTCACCTTTGTCT GCCCCACCGAGATTCTCGCCTTCAACGACTCTCTTGAGGCGTTCAAGGAGTTGAACACTGTCGTTCTCGGTATGTGCATTTGAATGTCTTTCGCGGAGCGCATTCTGATACGTTGCAGGT GTTTCCACCGACTCTGCCTACTCCCACTTCGCCTGGGCGTCCCAGCCCCGCAACCAGGGCGGTCTCGGCCCCAACCTCAAGCTCCCGCTCATCGCCGACCGCAACATGAAGATCTCCCGC GACTACGGCGTTCTCCTCGAGGAGGACGGTGTTGCTCTTCGCGGCCTCTTCATCATCGACCCTAAGGGCGTCCTCCGCCAGATCACCGTCAACGATCTCCCTGTCGGCCGCTCCGTCGAC GAGACCATCCGCCTCATCAAGGCGTTCCAGTTCGTCGTACGTGTTCATGTTCTTGCTCAGCGTTGCACGTGTCACTCACTTCCTTGCAGGAGAAGTACGGCGAAGTCTGCCCCGCCAACT GGAAGGAGGGTGGCAAGACCATGAAGGCCGACCCGAAGGGTTCCCTCGAGTACTTCTCCACTGTCAACACCAATGGTACGGACGACGGTGCGAGGAAGCGCCCCCGCCTCGAATGAGTTT CTCGAACCGAGATGCTGACCTTTTTGTCCTCCCCTTTTGCTCTGGACTACACAGCCCAGTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTCGCTCAGGTCCAGAAGCCCGCCCCCACCTTCAAGGCTCAGGCCGTTGTCGACGGTGTCTTCCAGGATGTCTCTCTTTCCGACTACCTCGGCCAATGGGTCGTCCTCTTCTTCTAC CCCATGGACTTCACCTTTGTCTGCCCCACCGAGATTCTCGCCTTCAACGACTCTCTTGAGGCGTTCAAGGAGTTGAACACTGTCGTTCTCGGTGTTTCCACCGACTCTGCCTACTCCCAC TTCGCCTGGGCGTCCCAGCCCCGCAACCAGGGCGGTCTCGGCCCCAACCTCAAGCTCCCGCTCATCGCCGACCGCAACATGAAGATCTCCCGCGACTACGGCGTTCTCCTCGAGGAGGAC GGTGTTGCTCTTCGCGGCCTCTTCATCATCGACCCTAAGGGCGTCCTCCGCCAGATCACCGTCAACGATCTCCCTGTCGGCCGCTCCGTCGACGAGACCATCCGCCTCATCAAGGCGTTC CAGTTCGTCGAGAAGTACGGCGAAGTCTGCCCCGCCAACTGGAAGGAGGGTGGCAAGACCATGAAGGCCGACCCGAAGGGTTCCCTCGAGTACTTCTCCACTGTCAACACCAATGCCCAG TAG |
Retrieve as FASTA
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