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Entry information : Ptro2CysPrx01-1 (PrxI / PRDX1 / Ptro2CysPrx01-1)
Entry ID 4535
Creation 2007-02-02 (Christophe Dunand)
Last sequence changes 2007-02-02 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-11-23 (Myriam Duval (Scipio))
Peroxidase information: Ptro2CysPrx01-1 (PrxI / PRDX1 / Ptro2CysPrx01-1)
Name (synonym) Ptro2CysPrx01-1 (PrxI / PRDX1 / Ptro2CysPrx01-1)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type Brain
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ptro2CysPrx01-1
start..stop		 S start..stop
Hs2CysPrx01 412 1.36e-149 1..199 1..199
Pabe2CysPrx01 411 2.37e-149 1..199 1..199
Mnem2CysPrx 411 2.37e-149 1..199 1..199
Mmul2CysPrx01 411 2.37e-149 1..199 1..199
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46275168..46275273 104 N° 2 46271871..46272024 152 N° 3 46271088..46271210 121 N° 4 46270722..46270852 129
N° 5 46267517..46267602 84  
complement(join(46267517..46267602,46270722..46270852,46271088..46271210,4627187 1..46272024,46275168..46275273))


exon

Literature and cross-references Ptro2CysPrx01-1 (PrxI / PRDX1 / Ptro2CysPrx01-1)
Literature Chimpanzee Sequencing and Analysis Consortium. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437 (7055), 69-87 (2005)
DNA ref. GenBank:   NC_006468.2 (46275273..46267517)
mRNA ref. GenBank:   XM_001156454
Cluster/Prediction ref. Genebank:   456537
Protein sequence: Ptro2CysPrx01-1 (PrxI / PRDX1 / Ptro2CysPrx01-1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199 (176)
PWM (Da):   %s   21968.19 (12258.4)  
PI (pH):   %s   7.96 (9.54) Peptide Signal:   %s   cut: 21 range:21-196
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE
TLRLVQAFQFTDKHGVCPAGWKPGSDTIKPDVQKSKEYFSKQK

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 1, 4 introns) and 9 ESTs (CB295664, CB295678, CB294573, CB295681, CB295679, CB295682, CB295662, CB295683, CB295663).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAGGAAATGCTAAAATTGGGCACCCTGCCCCCAACTTCAAAGCCACAGCTGTTATGCCAGATGGTCAGTTTAAAGATATCAGCCTGTCTGACTACAAAGGTGAGAGAATTAAC
ACTGGGCTCATTGAGATGGAGTTATTTTATATTCTAGGGGTGGCTTGTTAGATTTGTGTCAATGTTGTTTGACTGTAAAATGTTTTGTCTCCTAGGAAGAAGTATTTAGGTTGTTACCTT
CATGTTGAAGTGGTGATTATCAAGTGATTACAGGGTATATATCCTAGGACCAAACCACTTCTGGAGAAACTACATGCTTCATTATGTCTGGACATACTAGCTCAATTATCTTTTCAGTAT
TCCTCGTCTATTTTCTTTCGTTATTTTTATTTTTGAGACAGGGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAGTCATGGCTCACTGCAGCCTCTACCTCTCTGGGCTCAGGT
GGTCCTCCTACCTCAGCCTCCCAAGTAGCTGGGACTGTAGGGGCATGCTGCCATGCCTGGCTAATTTTTGTACCTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGG
AGTGCAATGGCGCGATCTCGGCTCACCACAACCTCCACTGCCCAGGTTCAAGCAATTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCGCCATCATGCCTGGCTAATTT
TTTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGGTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGATGATCCGCCCACTTCGGCGTCCCAAAATGCTGGGATTACAGGCATGAGC
CACCACGCCTGGCTTAATTTTTGTACTTTTTGTAGAGCTGGGCGCCATGTTGCCCAGGCTGGTCTCCAACTCCTGGGCTCAAGCCCTCTGCCTGCCCTAGCCTTTCAAAGTGCTGGGATA
ACAGGTGTGAGCCACTGCATCTGGCCCTCCTCTATTTTATTATTGGAGAAATACTCATTATCTCTTGTTATAAGAGACATTCTACATTTAAAGTCTCAGAGCTCACTCAAATCTCTGGAG
CTGTGACACTGCTCGTCAGTTTGTTTGGGTCACGTATATATCACAGCTGTTAATATTAGGCTGAGGGCTAGGCACTTTCCCTTGCCTGTTTTGACCCCAGAGGAGAGTTGATATTACAGA
TGGAACAACTCTCCTTTCTGTTGTCATAGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTCGCCCAGGCTAGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTC
CGCCTTCTGGGTTCATGCCATTCTCAGGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCAACCATGCTTGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATG
TTTGCTAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCTGCCTTGGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGCCACTGCGCGCGGCCTCTGTTGTCATAGTTTCATGCAGAC
ACTTGGCAAGTTCTGTTGAGGCTCCTCCTTTCTTTACCTTGTAGTCCCAGAGCAGCTCGATCTCCTGGGACAGTTGAGGATATAGATTCCTTAGAATGCTAACCTGAAACTCAGGTGTCA
AGTGTCCTTTTCTCAGTGGTGTAGCATTAGTTCCTGGAGTTAGTTTTTGGTAGAACATTTGACTAGGTTTCCTGACATAATCACACTTTGTTCTTGGGGCTTCTCCCAGCAAACAAGATA
AGTTGTACCATAGGGAGGTGACCTGGGCCCAGGGGTATAAGCAGGAGGTCTAGGAGGAGCTGCTCTCTGCCCTCCAGAGCTTGACCTGCTGAGGCCCCAAAGTGCTTGTTAGGCAAAGCC
CTGGAGGGGTTGTTTAGATGAGTTAGTTTCCAGTGATACTGCAAAGTGGTAAATGTCAAAAGGGCTGCTTGTTTGGCTTTTTTTTTTTTTTTTTTTTTTGAGGTGGAATTTTGATCTTGT
CGCACAGGCTGTAGTGCAGTGGCATGATCTCAGGTCACTGTGACCTCCATCTCCCCGGTTCAAGCGATTCTCCTGGCTCAGCCTCCCCAGTAGCTGAGATTTCAGGCCTCCGCTATCACA
CCCAGCTAATTTTTGTATTTTTAGTAGAGACACGTTTTACCATGTTGGTCAGCCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAACTGCCTCCCAAACTGC
TGGGATTACAGACGTCAGCCACCATGCCACCACTCCCAGCCTGTTTGACTTTTCAAACATTGCTGCTACCTGGAAATGAGTGAATATTTGGAATTGTTCTAGTATTTAAGCCTGGTGGGT
GTGGCGAGAAGGCTGCCTGGCCAGTTTGAAGATCTGTTATTTCAGTGGTTAATCCCAGTGACTTCATTAAAATTGCAGCTAGAAGTTCTGTTACTCACTAGTACTTTTGTCTTTTCTGTC
TCTCTCTGTCTCCCTCTTTCTCTCTCTCTCTCTCTGTGTATATGTATATATATATTTCTGTTGTTTTGAGACAGTCTTGCTGTGTTGCCCAGGCTGGCCTCAAACTCCTGGGGTCAAGGG
ATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGACACGCACCACTGTGCCTGGCTTAAAATTTTTCCTGTCCTGTCAGGCACGTTAGGAACACATGTGATCACTTAAACTATGC
TTCTTCCATTACTATGGTTCATCACGGGAGAAGTGCAAAGGCTCTGACTTCTTATTGGTGTCTTATCTCTACAGCAGAGGAGTACTGCAATTCAGCTTTCTCTGAGTATTGTTAAGCATT
GGCATTAGGCCATGCTTATAAGTGCATCCTTGCTTTGCTATCTTTGGAGAACTTGGTGTTGGAGAACTTGGTGTTTATGTTAATTTTAGCCACTCAGAAAAGATCAAAATTAGACTGAAC
AGTGTTTACTCTGTATTGGTAGCTATGACATGGAGGCAGGAGAATAAAGTATGGGATTGGAAGTTTTTTTCATTCAGGTATTCCTAATGCACCAGGTTCTAAAAGTAGCTTCTAGGAGAC
ATCTGTATTGAGCATCTTGGCAGTTAGTGGTTATTGTGTCAGCCATCAACTTGCTTCTTTTTGTATAGGAAAATATAAAGCAAGGAAGTCTGTGTCGAATGCTAACCATGACTCCGATTT
TTCCCCCAGGAGAAAATATGTTGTGTTCTTCTTTTACCCTCTTGACTTCACCTTTGTGTGCCCTACGGAGATCATTGCTTTCAGTGATAGGGCAGAAGAATTTAAGAAACTCAACTGCCA
AGTGATTGGTGCTTCTGTGGATTCTCACTTCTGTCATCTAGCATGGTAAATCTCTTGGTCTATTTGGCATGTGAACTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTTTG
TCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCCGCTCACTTCAAGCTCTGCCTCCCAGTTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCTGCCACCAT
ACCCGGCTAATTTTTTGTATTTTCAGTAGAGATGGTGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAG
GTGTGAGCCACTGCACCTGGCTGGCATGTGAACTTTTAAAACAGCAACTGGGAAGCTTTGGCAATAGACTTTCAAGTATTGCCTTCTCATTGAAGGGAGTGCAAAGTCTGACTTTCTCTT
ATTGCTCTCATGACCTGGCAGCAGAGAAGAAGCAGCTTCAATTGCAGTTGAGTGTACCCTAGTGACCTACCTTAACTGTTCTCAGCATTCACTTTATTGCTGGAAAACGGGAAAAAAAAC
AGTCTTTTTGGAAAGTTAGGTTAGGAATATGGGAAAGGGGAAAGAGGAATGGGTACAGTTAAGTCAAGAGTTTGAATGTAACTGTATGTTTGCCTTTTGCCATAGGGGGTCAATACACCT
AAGAAACAAGGAGGACTGGGACCCATGAACATTCCTTTGGTATCAGACCCGAAGCGCACCATTGCTCAGGATTATGGGGTCTTAAAGGCTGACGAAGGCATCTCGTTCAGGTATGTCATC
AGGACAAGTATCCAGTTGGCTGAAAGCCTTTTATTTGGAGAGATCTAGAGCCCTGATCTGTAGAGACTCCTTGTCATTTCATTCCTTTATGCAGGGGCCTCCTCACTAAGGCCAGGCCAG
TAGGAATGTGGAGACCAGTCCATTTCCTTCAGGCTTCAAGCCTCTGTATTCTAACAAAGCACATCTCTAAACCTGTATTACTTTTCCTTTCATCTCTTTTCCCAGGGGGGCCTTTTTATC
ATTGATGATAAGGGTATTCTTCGGCAGATCACTGTAAATGACCTCCCTGTTGGCCGCTCTGTGGATGAGACTTTGAGACTAGTTCAGGCCTTCCAGTTCACTGACAAACATGGGGAAGGT
AAGCCATCTGTCTGATAACAGGACAACAGAGTGGTGGTATGAAGGGGTGGGTTGCCCCTCCACACCTGTGGGTGTTTCTCGTTAGGTGGAATGAGAGACTTGGAAAAAGACACGTAGACA
AAGTATAGAGAAAGAAATAAGGGGGCCCAGGGGACCAGTGTTCAGCATACAGAGGATCCCGCCGGCCTCTGAGTTCCCTTAGTATTTATTGATCATTCTTGGGTGTTTCTCGGAGAGGGG
GATGTGGCAGGGTCATAGGATAATAGTGGAGAGAAGGTCAGCAGATAAACACGTGAACAAAGGTCTCTGCATCATGAACAAGGTAAAGAATTAAGTGCTGTGCTTTAGATGTGCATACAC
ATAAACATCTCAATGCCTTAAAGAGCAGTATTGCTGCCCGCATGTCCCACCTCCAGCTGTAAGGCGGTTTTCCCCTATCTCGGTAGATGGAACATACAATTGGGTTTTATACTGAGACAT
TCCATTGCCCAGGGACTGGCTGGAGACAGATACCTTCCTCTTGTCTCAACTGCAAAGAGGCGTTCCTTCCTCTTTTACTAATCCTCCTTAGCACAGGGTGTCAGGCCGGGGGACCCCGGT
CAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGGTTTCCTAGGCAGAGGTCCCTGTGGCCTTCCGCAGTGTTTGTGTCCCCGG
ATACTTGAGATTAGGGAGTGGTGATGACTCTTAAAACAAGCATGCTGCCTTCAAGCATTTGTTTAACAAAGCATATCTTGCACAGCCCTTAATCCATTTAACCCTGAGTTGACACAGCAC
ATGTTTCAGGGAGCACAGGGTTGGGGGTAAGGTTACAGATTAACAGCATCTCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGGAGTCTCCTATGTCTACTTCTTTGTACACAGA
GACAGTAACAATCTGATCTCTCTTTTCCCCACAGTGGTAGAATGGGAAAGATAGTAGGAACAGAAGCTGCCAAATAAGAAAATGGGTATCTCTCTTCATAAATTGAAGCCCCTGGATTAC
AGTGTGTTGTGAGGGTGAGGGTAATGGAAAAGCTTGGGAAGGAGAATATAAAGGCTTTTTATTCAAAGTATACATACTCCTCTCTTCTGTCCTGCTCATTTAGAATCAGTCACTCCCAAA
GATCTAACTTACTGAATGTAGGATGATCTCACAGATGTATTAGGGCAAAACAAAATGGTTGGGAATCACGTCTAGAGATAAAGCATGCCATTTTTTAAATAACTTTATTGAGAGAAGAGG
TTAATCCATATAGTTCATATTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGCAAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTCAGTGGCGCAGT
CTTGGCTCACTGCAACCTCCGCCTCCCCTGAGCCATTGCACCCAGCCCAGACTAGCTTTCTAAGGCCTATTTCAGCTCTGATCTTGTGATTTAAAGGAAATGAAGTTATTAGAGTCTGGA
TTAGTGGTGTATGTTTGGGAAGACCCAAAGGTGCTAGCTTGGCTAGCACCAAGTAATCTTTTTACAGGGATTAGAGTCTGATTATATAGGGATCAGTGAGCACTGATAACCAAGAGGTAC
CCTTTGCAGAAGGATGTGTGGGCAGTTAGCCTGGACAGATGACACATGGCTCAGCTGACACCTGCTGAGACTGCCCCCTTGTGGGAGATGAGGTTCAGCATTAAGAAGGAGGCGGCAGTG
GCAAAGTAGGCCCTTTAACTGGACTTTCCTAGGAACCTACATATAGGTTAGTCTCCTGAACCCAGGCTTTCATAACTCAGAAGCTTGCTTCTTCAGACTCTGTTGGTCTCTGCTGCTTCC
CATCCCACTGGAACATGTACAGCCTCTTAAATAGGTACCATTTAAGAGCCAATGAATGCCAAACACTTTTTTTTTTTGAGACAGAGTCTTGTTTTGTCGCCCAGACTGGAGTGCAGTGGT
GTGATCTCAGCTCACTGCAGCCTCCACCTCCTGGGTTCAAGTGATTCTCTTGCCTCAGCCTCCTGAGTAGCTAGGACTACAGAGGTCCACCACCACGCCCCACTATTTTTGTATAGTCCC
AGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAATGTGAGACTGTCTCAAAAATT
AGCCGGGTGTGGTGGTGGGTGCCTGTAATCCTAGCTATTTGGGAGGCTGATGCAGGAGAATCGCTTGAACCCGGGAGACTGAGGTTGCAGTGAGACGGAGGTGGAGATTGCGCCACCGTA
CTCCAGCCTGGGCAACAGAGGGAGACTCCATCTCAAAAAAAAAAAGAAAAGAAAAGAAAAAAGAAAAATAAGAGATTAGTCCCCTTGCCTCATTTTCTTCAGGCTAGCCTGAGGCACATT
CTTAGGCATTGTCAGGAAAAGGTTGAAGGCTGTGCTTTCTGTATAAATCTATGAAAAATTTCAAACTCTGCCTTTTGCTTACCAAGGGGTAGATGGCAGTTACTTAATGAAACAAGCGGG
GGCTTCTGTTAAGTTCTGGATCCTTTATAAGGTTCAGGCTATCCAGTTTGGTAGAGTTAGAAGAATGCTGAGAAGGCAGACTGAGTTTGCTGTCTTCAGAGCTCTGAAGGGCTGTCAGAA
ACAGTTTAGTGTTAAGGGTTTACATAGTCCTATGTGTGTCGTTTATTTAGCTTTTTTTTCCCCTTAAGGATTAGAGAGTGTTGGCAAATCATTTAAACTTTGCCTTTTTTTGTGGAAAAT
TTAAATTTCAAGTGCTACATGAATAAATTAGGCATGATAGTATCTTAAGGCTGTGGTGATGATTATATGTTTGTAAAATGGTTAGCTTATACTAAAAGGGTGAATGATCTTAGACTGATT
GCAGGGGTAGGTTTCCTGGTATCTGAGTGTTCAGGTGCAGAACTGGTTTTGTCCATAGGAGAATGGTGGTGCATACCATTGAGAAGGTTATTAATTAGTGGTGCCTTTCTCTTGCAGTGT
GTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAGCCTGATGTCCAAAAGAGCAAAGAATATTTCTCCAAGCAGAAGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAGGAAATGCTAAAATTGGGCACCCTGCCCCCAACTTCAAAGCCACAGCTGTTATGCCAGATGGTCAGTTTAAAGATATCAGCCTGTCTGACTACAAAGGAAAATATGTTGTG
TTCTTCTTTTACCCTCTTGACTTCACCTTTGTGTGCCCTACGGAGATCATTGCTTTCAGTGATAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGTGCTTCTGTGGATTCT
CACTTCTGTCATCTAGCATGGGTCAATACACCTAAGAAACAAGGAGGACTGGGACCCATGAACATTCCTTTGGTATCAGACCCGAAGCGCACCATTGCTCAGGATTATGGGGTCTTAAAG
GCTGACGAAGGCATCTCGTTCAGGGGCCTTTTTATCATTGATGATAAGGGTATTCTTCGGCAGATCACTGTAAATGACCTCCCTGTTGGCCGCTCTGTGGATGAGACTTTGAGACTAGTT
CAGGCCTTCCAGTTCACTGACAAACATGGGGAAGTGTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAGCCTGATGTCCAAAAGAGCAAAGAATATTTCTCCAAGCAGAAGTGA

Retrieve as FASTA