Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
963 (294) |
| PWM (Da): |
108930.39 (31096.1) |
Transmb domain: |
o399-421i539-561o581-603i760-777o |
| PI (pH): |
9.54 (6.65) |
Peptide Signal: |
cut: 26 range:26-319 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRGLPGHERR WTSDTVSSGK DLSGESSPGT DSGNISGFAS EEFVEVILDL QDDDTIILRS VEPATVINID ASDPATGVGI GGVSIETPAS LTSTSGTRSP TMRRSTSNKL RQFSQELKAE
AVAKAKHFSQ ELKAELRRFS WSHGHASRTF SPASFFQNAV VGTGNGVDSA LAARALRRQR AQLDRTRSSA HKALRGLKFI SNNKTNGWNE VENNFAKLAK DGYLYRSDFA QCIGMKDSKE
FALELFDALS RRRRLKVDKI SKEELYEYWS QITDQSFDSR LQIFFDMVDK NEDGRIGEEE VKEIIMLSAS ANKLSRLKEQ AEEYAALIME ELDPERLGYI ELWQLETLLL QKDTYLNYSQ
ALSYTSQALS QNLQGLRKRS PIRRMSTKLV YSLQENWKRI WVLVLWILIM IGLFLWKFYL YKQKSAFQVM GYCLLTAKGA AETLKFNMAL ILLPVCRNTI TFLRSTKLSC FVPFDDNINF
HKTVAAAIVT GIILHAGNHL VCDFPKLIHA NNTNYQKYLV NDFGPSQPQY IDLVKGVEGV TGIIMVILMA IAFTLATRWF RRSLIKFPKP FDRLTGFNAF WYSHHLLIIV YIVLIIHGTF
LYLVHNWYSK TTWMYLAVPV LLYAGERTLR FFRSGLYTVR LLKVAIYPGN VLTLQMSKPP QFRYKSGQYM FVQCPAVSPF EWHPFSITSA PGDDYLSIHI RQLGDWTQEL KRVFSEACEQ
PEAGKSGLLR ADENTKTSLP KLLIDGPYGA PAQDYRKYDV LLLVGLGIGA TPFISILKDL LKNIVTMEEQ ADLVSDFSGN SDMSAATSEQ PALNKISPKK RKSTLKTTNA YFYWVTREQG
SFDWFKGVMN EVAELDQRGV IEMHNYLTSV YEEGDARSAL ITMVQALNHA KNGVDIVSGT SVRTHFARPN WRKVFSKTLT KHANARIGVF YCGAPILAKE LSKLCKEFNQ KGTTKFEFHK
EHF
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from 1 mRNA. Cultivar="Rishiri". No EST. |
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGGTT TACCTGGGCA TGAACGCCGG TGGACGTCGG ATACGGTATC TTCCGGCAAG GATTTAAGTG GTGAGTCATC GCCGGGAACT GATTCCGGGA ATATTTCCGG TTTTGCTTCC
GAGGAGTTTG TTGAAGTTAT ACTTGATCTT CAGGATGATG ATACGATTAT TCTACGGAGC GTTGAACCGG CTACTGTAAT CAACATTGAT GCTTCTGATC CTGCTACCGG AGTCGGTATT
GGTGGAGTAT CGATTGAAAC TCCGGCGTCG CTGACTTCGA CGTCGGGAAC TCGATCGCCG ACGATGCGTC GGAGTACATC GAATAAATTA CGTCAGTTTT CACAGGAGTT GAAAGCTGAG
GCTGTCGCGA AAGCGAAGCA TTTCTCGCAA GAGCTTAAAG CGGAGCTAAG GAGATTCTCA TGGAGCCATG GACATGCGTC TCGCACTTTT TCGCCGGCGT CGTTTTTCCA AAACGCCGTC
GTCGGTACAG GCAACGGTGT AGATTCGGCT TTAGCAGCTC GAGCATTACG ACGGCAGCGC GCTCAGCTCG ATCGGACTCG TTCCAGCGCT CACAAGGCTC TTCGTGGACT CAAATTCATC
AGCAATAACA AAACTAACGG ATGGAATGAA GTTGAAAACA ATTTTGCTAA GCTCGCTAAA GACGGTTACC TTTATCGCTC CGATTTCGCA CAATGCATCG GTATGAAGGA TTCAAAGGAA
TTTGCATTGG AATTGTTTGA TGCTTTGAGT AGAAGAAGAA GATTGAAGGT TGATAAGATT AGCAAAGAGG AATTGTATGA GTATTGGTCT CAAATCACCG ATCAGAGTTT CGATTCTCGG
CTTCAGATCT TCTTCGACAT GGTGGACAAG AATGAAGATG GTCGAATTGG TGAAGAAGAA GTAAAAGAGA TCATCATGCT AAGTGCCTCT GCAAACAAAT TATCAAGATT AAAAGAACAA
GCAGAGGAGT ATGCAGCTCT GATCATGGAA GAATTAGATC CTGAAAGACT TGGCTACATT GAGCTATGGC AGCTGGAAAC GCTTCTCCTC CAAAAGGACA CTTACCTCAA CTACAGTCAA
GCACTAAGCT ACACAAGCCA AGCTTTGAGC CAAAACCTGC AAGGGTTGAG GAAGAGAAGC CCAATAAGAA GAATGAGCAC AAAACTTGTC TATTCACTGC AAGAGAATTG GAAGAGAATT
TGGGTTCTGG TCTTGTGGAT TTTGATAATG ATTGGACTTT TTCTTTGGAA GTTCTATCTG TACAAACAGA AAAGTGCATT TCAAGTTATG GGTTATTGCC TTCTAACAGC TAAGGGTGCT
GCTGAGACTC TAAAGTTCAA CATGGCTTTG ATATTGTTGC CAGTTTGCAG GAACACCATT ACATTCCTCA GGTCTACTAA ATTGAGTTGT TTTGTACCCT TTGATGACAA CATCAACTTC
CACAAGACTG TTGCTGCAGC CATTGTTACT GGTATCATAC TCCATGCCGG TAATCATCTT GTATGTGATT TCCCAAAGCT TATACATGCA AATAATACGA ATTATCAGAA ATATTTGGTG
AATGATTTTG GCCCAAGCCA GCCTCAGTAC ATAGATCTTG TTAAAGGAGT GGAGGGTGTG ACAGGAATAA TAATGGTAAT CCTCATGGCC ATTGCTTTCA CTCTTGCAAC GCGATGGTTT
AGGCGGAGCC TCATTAAGTT TCCCAAACCT TTTGATAGAC TCACTGGTTT CAATGCGTTC TGGTACTCGC ACCACCTTCT CATCATTGTC TACATCGTAC TGATCATCCA TGGCACATTC
CTCTACCTTG TGCATAACTG GTACTCCAAA ACGACATGGA TGTATCTAGC AGTTCCTGTA CTTCTCTACG CAGGGGAAAG AACTCTTAGA TTCTTCCGAT CAGGCTTATA TACAGTCCGG
CTTCTAAAAG TAGCAATATA TCCTGGAAAT GTCCTTACTC TGCAAATGTC TAAGCCTCCG CAATTTCGAT ACAAGAGTGG ACAATATATG TTTGTCCAGT GTCCAGCTGT TTCTCCATTC
GAGTGGCATC CATTTTCCAT TACTTCAGCT CCTGGGGATG ACTACTTGAG CATTCATATC CGACAACTTG GTGACTGGAC TCAAGAACTC AAGCGGGTGT TTTCCGAGGC TTGCGAGCAG
CCAGAGGCTG GAAAGAGTGG CCTGCTCAGA GCTGACGAAA ACACCAAAAC AAGTTTGCCA AAGCTATTGA TAGATGGACC TTATGGAGCT CCAGCACAAG ATTACCGAAA GTATGATGTC
TTACTGCTTG TTGGTCTTGG CATTGGAGCA ACTCCCTTTA TAAGTATCCT GAAAGACTTG CTCAAAAACA TCGTCACAAT GGAGGAGCAA GCAGATTTAG TCTCGGATTT TTCAGGGAAC
TCAGACATGA GCGCTGCAAC AAGTGAACAA CCAGCTCTCA ACAAGATTTC TCCAAAAAAG AGAAAGAGTA CTCTAAAAAC CACAAATGCA TATTTTTATT GGGTGACCCG GGAGCAAGGA
TCATTTGATT GGTTCAAAGG TGTTATGAAC GAAGTGGCTG AACTTGATCA AAGGGGGGTC ATCGAGATGC ATAACTACTT AACGAGTGTT TATGAGGAAG GGGATGCACG TTCAGCTCTC
ATTACCATGG TCCAGGCGCT TAACCATGCT AAGAATGGGG TTGATATTGT ATCAGGCACC AGTGTGAGGA CACATTTTGC CAGACCGAAT TGGAGGAAAG TATTTTCCAA GACCTTAACC
AAGCATGCAA ATGCAAGAAT AGGAGTTTTC TACTGCGGTG CACCCATATT AGCTAAAGAA CTCAGCAAAC TCTGCAAAGA GTTTAACCAA AAGGGCACAA CGAAGTTCGA GTTTCACAAA
GAACATTTTT AG
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGCACGAGAA TAACCAAAAC TTTTGGTCAG GCTTCTGCAG AAAACTCTGT TTTCAACATA TATTTATTTA TTGTGCTTTG ATTTGGGACA AATGAGGGGT TTACCTGGGC ATGAACGCCG
GTGGACGTCG GATACGGTAT CTTCCGGCAA GGATTTAAGT GGTGAGTCAT CGCCGGGAAC TGATTCCGGG AATATTTCCG GTTTTGCTTC CGAGGAGTTT GTTGAAGTTA TACTTGATCT
TCAGGATGAT GATACGATTA TTCTACGGAG CGTTGAACCG GCTACTGTAA TCAACATTGA TGCTTCTGAT CCTGCTACCG GAGTCGGTAT TGGTGGAGTA TCGATTGAAA CTCCGGCGTC
GCTGACTTCG ACGTCGGGAA CTCGATCGCC GACGATGCGT CGGAGTACAT CGAATAAATT ACGTCAGTTT TCACAGGAGT TGAAAGCTGA GGCTGTCGCG AAAGCGAAGC ATTTCTCGCA
AGAGCTTAAA GCGGAGCTAA GGAGATTCTC ATGGAGCCAT GGACATGCGT CTCGCACTTT TTCGCCGGCG TCGTTTTTCC AAAACGCCGT CGTCGGTACA GGCAACGGTG TAGATTCGGC
TTTAGCAGCT CGAGCATTAC GACGGCAGCG CGCTCAGCTC GATCGGACTC GTTCCAGCGC TCACAAGGCT CTTCGTGGAC TCAAATTCAT CAGCAATAAC AAAACTAACG GATGGAATGA
AGTTGAAAAC AATTTTGCTA AGCTCGCTAA AGACGGTTAC CTTTATCGCT CCGATTTCGC ACAATGCATC GGTATGAAGG ATTCAAAGGA ATTTGCATTG GAATTGTTTG ATGCTTTGAG
TAGAAGAAGA AGATTGAAGG TTGATAAGAT TAGCAAAGAG GAATTGTATG AGTATTGGTC TCAAATCACC GATCAGAGTT TCGATTCTCG GCTTCAGATC TTCTTCGACA TGGTGGACAA
GAATGAAGAT GGTCGAATTG GTGAAGAAGA AGTAAAAGAG ATCATCATGC TAAGTGCCTC TGCAAACAAA TTATCAAGAT TAAAAGAACA AGCAGAGGAG TATGCAGCTC TGATCATGGA
AGAATTAGAT CCTGAAAGAC TTGGCTACAT TGAGCTATGG CAGCTGGAAA CGCTTCTCCT CCAAAAGGAC ACTTACCTCA ACTACAGTCA AGCACTAAGC TACACAAGCC AAGCTTTGAG
CCAAAACCTG CAAGGGTTGA GGAAGAGAAG CCCAATAAGA AGAATGAGCA CAAAACTTGT CTATTCACTG CAAGAGAATT GGAAGAGAAT TTGGGTTCTG GTCTTGTGGA TTTTGATAAT
GATTGGACTT TTTCTTTGGA AGTTCTATCT GTACAAACAG AAAAGTGCAT TTCAAGTTAT GGGTTATTGC CTTCTAACAG CTAAGGGTGC TGCTGAGACT CTAAAGTTCA ACATGGCTTT
GATATTGTTG CCAGTTTGCA GGAACACCAT TACATTCCTC AGGTCTACTA AATTGAGTTG TTTTGTACCC TTTGATGACA ACATCAACTT CCACAAGACT GTTGCTGCAG CCATTGTTAC
TGGTATCATA CTCCATGCCG GTAATCATCT TGTATGTGAT TTCCCAAAGC TTATACATGC AAATAATACG AATTATCAGA AATATTTGGT GAATGATTTT GGCCCAAGCC AGCCTCAGTA
CATAGATCTT GTTAAAGGAG TGGAGGGTGT GACAGGAATA ATAATGGTAA TCCTCATGGC CATTGCTTTC ACTCTTGCAA CGCGATGGTT TAGGCGGAGC CTCATTAAGT TTCCCAAACC
TTTTGATAGA CTCACTGGTT TCAATGCGTT CTGGTACTCG CACCACCTTC TCATCATTGT CTACATCGTA CTGATCATCC ATGGCACATT CCTCTACCTT GTGCATAACT GGTACTCCAA
AACGACATGG ATGTATCTAG CAGTTCCTGT ACTTCTCTAC GCAGGGGAAA GAACTCTTAG ATTCTTCCGA TCAGGCTTAT ATACAGTCCG GCTTCTAAAA GTAGCAATAT ATCCTGGAAA
TGTCCTTACT CTGCAAATGT CTAAGCCTCC GCAATTTCGA TACAAGAGTG GACAATATAT GTTTGTCCAG TGTCCAGCTG TTTCTCCATT CGAGTGGCAT CCATTTTCCA TTACTTCAGC
TCCTGGGGAT GACTACTTGA GCATTCATAT CCGACAACTT GGTGACTGGA CTCAAGAACT CAAGCGGGTG TTTTCCGAGG CTTGCGAGCA GCCAGAGGCT GGAAAGAGTG GCCTGCTCAG
AGCTGACGAA AACACCAAAA CAAGTTTGCC AAAGCTATTG ATAGATGGAC CTTATGGAGC TCCAGCACAA GATTACCGAA AGTATGATGT CTTACTGCTT GTTGGTCTTG GCATTGGAGC
AACTCCCTTT ATAAGTATCC TGAAAGACTT GCTCAAAAAC ATCGTCACAA TGGAGGAGCA AGCAGATTTA GTCTCGGATT TTTCAGGGAA CTCAGACATG AGCGCTGCAA CAAGTGAACA
ACCAGCTCTC AACAAGATTT CTCCAAAAAA GAGAAAGAGT ACTCTAAAAA CCACAAATGC ATATTTTTAT TGGGTGACCC GGGAGCAAGG ATCATTTGAT TGGTTCAAAG GTGTTATGAA
CGAAGTGGCT GAACTTGATC AAAGGGGGGT CATCGAGATG CATAACTACT TAACGAGTGT TTATGAGGAA GGGGATGCAC GTTCAGCTCT CATTACCATG GTCCAGGCGC TTAACCATGC
TAAGAATGGG GTTGATATTG TATCAGGCAC CAGTGTGAGG ACACATTTTG CCAGACCGAA TTGGAGGAAA GTATTTTCCA AGACCTTAAC CAAGCATGCA AATGCAAGAA TAGGAGTTTT
CTACTGCGGT GCACCCATAT TAGCTAAAGA ACTCAGCAAA CTCTGCAAAG AGTTTAACCA AAAGGGCACA ACGAAGTTCG AGTTTCACAA AGAACATTTT TAGAAGGCCC TGGAGTACAA
TTAATCTTGC ATCAACGGTA CACACATCGG TAAACCAGTA TTTACCACAT CTATCTTTGG TACCTGATTT GATGATTCTA CTGAAGACAT AACATTAGTA AGGAATAAGT CAGAGACAAA
TTGTACATAA TAGGAGGAAG CACATTTACA GAGAAAATAC ATACCAATAT GATATGTGTA TAGGTTTTGT ATATTCAGTC ATCTGTTATC ACATACCAAA CTTCAGAACT CCAAAAGGGA
GACTCTGCTT TGGTCTGATG GCTTAGAATA TGGGAGGGAA AAAAAGACGA CAATTGAATG GTCACGATAC ACATGAAGAA TGAGAATATT GGGAAACAGC TAATAAGAAG TTGACCTTCT
TGATAAAGAA ACACTATGAA AATGGCAAGC ATGAAAGGAC AGACAATCAT GGCTTGGATG GGGAAAACAA AATACAATTT TGAAAGAAGA AGATAATATT AGTAGGAGTA GTGGGGGACT
GATAGCTTTG TTGGTGGAAC TTATAATGGG GCTAAGGGAA TCCTTCCAAA AAATGTCTAT GTAGTAACTA CTTTTTCTTT TGCTTTGTGA GTATTTTTTG GGGTATTTTA ATATACTACT
TATTAGATAA GAGGATAGAA AATACGTGTA TATGCAATTC TTATTAGTAA AGTTTATCTG TAGTAGTTCT TTAATCTGGA GAAAGGTACT ATCAAAGGAA ATATCTCATC GAAAAAAAAA
AAAAAAAAAA AAA
|
Retrieve as FASTA
|
|
