The peroxidases and oxidases database
Entry information : TmaCMD (Tm1620 / Apx4843)
Entry ID 4560
Creation 2007-02-08 (Filippo Passardi)
Last sequence changes 2007-02-08 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-04-12 (Christophe Dunand)
Peroxidase information: TmaCMD (Tm1620 / Apx4843)
Name (synonym) TmaCMD (Tm1620 / Apx4843)
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Bacteria Thermotogae Thermotogae (class) Thermotogaceae Thermotoga
Organism Thermotoga maritima    [TaxId: 2336 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TmaCMD
start..stop		 S start..stop
TpCMD 240 2e-84 1..121 1..121
TmeCMD 177 3e-59 1..121 1..121
FnoCMD 170 2e-56 2..121 11..127
HorCMD 140 1e-44 4..105 5..106
Literature and cross-references TmaCMD (Tm1620 / Apx4843)
Literature REFERENCE 1 Nelson K.E. et al. Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima. Nature 399:323-329(1999).

REFERENCE 2 Kim,Y., Joachimiak,A., Brunzelle,J.S., Korolev,S.V., Edwards,A., Xu,X. and Savchenko,A. Crystal Structure Analysis Of Thermotoga Maritima Protein Tm1620 (Apc4843)
Protein ref. UniProtKB:   Q9X1V5
DNA ref. GenBank:   AE000512.1 (1608357..1608722)
Protein sequence: TmaCMD (Tm1620 / Apx4843)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   121 (372)
PWM (Da):   %s   13667.14 (39761.0)  
PI (pH):   %s   6.52 (4.68) Peptide Signal:   %s   cut: 17 range:17-388
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEYKKFVEAR RELNEKVLSR GTLNTKRFFN LDSAVYRPGK LDVKTKELMG LVASTVLRCD DCIRYHLVRC VQEGASDEEI FEALDIALVV GGSIVIPHLR RAVGFLEELR EMEKNGETIS 
L 

Retrieve as FASTA  
Remarks Complete sequence from genomic. This protein was crystallised in his homohexameric form (NCBI accessions: 1P8C_A to F). Strain="ATCC 43589 / MSB8 / DSM 3109 / JCM 10099".