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Entry information : TtCMDn (TTHA0727)
Entry ID 4565
Creation 2007-02-09 (Filippo Passardi)
Last sequence changes 2007-02-09 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-11-05 (Christophe Dunand)
Peroxidase information: TtCMDn (TTHA0727)
Name (synonym) TtCMDn (TTHA0727)
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: N/D] N/D
Taxonomy Bacteria Deinococcus-Thermus Deinococci Thermaceae Thermus
Organism Thermus thermophilus    [TaxId: 274 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TtCMDn
start..stop		 S start..stop
PatCMD 42 0.00000211 49..98 41..90
BUspCMD 41 0.00000768 45..117 35..107
CAspCMD 40 0.000022 48..117 55..124
NwCMD 39 0.0000274 45..117 35..107
Literature and cross-references TtCMDn (TTHA0727)
Literature Ito,K., Arai,R., Fusatomi,E., Kamo-Uchikubo,T., Kawaguchi,S.,
Akasaka,R., Terada,T., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.

Crystal structure of the conserved protein TTHA0727 from Thermus
thermophilus HB8 at 1.9 A resolution: A CMD family member distinct
from carboxymuconolactone decarboxylase (CMD) and AhpD

Protein Sci. 15 (5), 1187-1192 (2006)
Protein ref. GenPept:   YP_143993.1 UniProtKB:   Q5SMF5  Q72KN2 [Other strain]
DNA ref. GenBank:   55979969 (691886..692239)
Protein sequence: TtCMDn (TTHA0727)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   117 (513)
PWM (Da):   %s   12459.78 (54079.7)  
PI (pH):   %s   9.27 (4.25) Peptide Signal:   %s   cut: 21 range:21-533
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MDRTHERVLQ AMAENLGEGL PRAIPLLAEK APGLLLEHGR SWTYAMPEKG ALDEKTRTLI LLGIALATGS EACVKAMAHR AKRLGLSKEA LLETLKIARQ AQANAVLGHA APLLEVL 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="HB8 / ATCC 27634 / DSM 579" and "strain HB27 / ATCC BAA-163 / DSM 7039". This protein has been crystallised and exists under an hexameric form. Two uniProt accessions Q5SMF5 and Q72KN2 (different strains).