The peroxidases and oxidases database
Entry information : TtCMDn (TTHA0727)
Entry ID 4565
Creation 2007-02-09 (Filippo Passardi)
Last sequence changes 2007-02-09 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-11-05 (Christophe Dunand)
Peroxidase information: TtCMDn (TTHA0727)
Name (synonym) TtCMDn (TTHA0727)
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: N/D] N/D
Taxonomy Bacteria Deinococcus-Thermus Deinococci Thermaceae Thermus
Organism Thermus thermophilus    [TaxId: 274 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TtCMDn
start..stop		 S start..stop
PatCMD 42 0.0000021 49..98 41..90
BUspCMD 41 0.00000765 45..117 35..107
CAspCMD 40 0.0000219 48..117 55..124
NwCMD 39 0.0000272 45..117 35..107
Literature and cross-references TtCMDn (TTHA0727)
Literature Ito,K., Arai,R., Fusatomi,E., Kamo-Uchikubo,T., Kawaguchi,S.,
Akasaka,R., Terada,T., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.

Crystal structure of the conserved protein TTHA0727 from Thermus
thermophilus HB8 at 1.9 A resolution: A CMD family member distinct
from carboxymuconolactone decarboxylase (CMD) and AhpD

Protein Sci. 15 (5), 1187-1192 (2006)
Protein ref. GenPept:   YP_143993.1 UniProtKB:   Q5SMF5   Q72KN2 [Other strain]
DNA ref. GenBank:   55979969 (691886..692239)
Protein sequence: TtCMDn (TTHA0727)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   117 (513)
PWM (Da):   %s   12459.78 (54079.7)  
PI (pH):   %s   9.27 (4.25) Peptide Signal:   %s   cut: 21 range:21-533
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MDRTHERVLQ AMAENLGEGL PRAIPLLAEK APGLLLEHGR SWTYAMPEKG ALDEKTRTLI LLGIALATGS EACVKAMAHR AKRLGLSKEA LLETLKIARQ AQANAVLGHA APLLEVL 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="HB8 / ATCC 27634 / DSM 579" and "strain HB27 / ATCC BAA-163 / DSM 7039". This protein has been crystallised and exists under an hexameric form. Two uniProt accessions Q5SMF5 and Q72KN2 (different strains).