The peroxidases and oxidases database
Entry information : AtuCMD
Entry ID 4566
Creation 2007-02-12 (Filippo Passardi)
Last sequence changes 2007-02-12 (Filippo Passardi)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-03-15 (Catherine Mathe)
Peroxidase information: AtuCMD
Name AtuCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD002]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhizobiaceae Agrobacterium
Organism Agrobacterium tumefaciens    [TaxId: 358 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtuCMD
start..stop		 S start..stop
RleCMD 261 1e-91 1..153 1..153
RetCMD 257 6e-90 1..153 1..153
SmeCMD 230 4e-79 1..153 1..153
SmedCMD 229 7e-79 1..153 1..153
Literature and cross-references AtuCMD
Literature 1. Wood, D.W. et al. The genome of the natural genetic engineer Agrobacterium
tumefaciens C58. Science 294 (5550), 2317-2323 (2001)
2. Zhang,R., Xu,X., Gu,J., Savchenko,A., Edwards,A. and Joachimiak,A. The Crystal Structure Of A Hypothetical Protein Atu0492 From Agrobacterium Tumefaciens. Unpublished
Protein ref. GenPept:   17934405 UniProtKB_Uniparc:   Q8UI08
DNA ref. GenBank:   17933925 (478767..479228)
Protein sequence: AtuCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   153 (117)
PWM (Da):   %s   17029.69 (12343.3)  
PI (pH):   %s   6.79 (4.72) Peptide Signal:   %s   cut: 21 range:21-137
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKTRINYAKA SPEAFKAVMA LENYVQSSGL EHRFIHLIKL RASIINGCAF CVDMHVKESR HDGLSEQWIN LMSVWRESPV YTEQERALLG WVDAVTKIAE TGAPDDAFET LRAHFSDEEI 
VKITVAIGAI NTWNRIAVGF RSQHPVEAAA KAA 

Retrieve as FASTA  
Remarks Complete sequence from Genomic, protein crystallised. Strain="C58 / ATCC33970". Two SwissProt accessions Q8UI08 and Q7D1C9 (alternative START codon (15 amino acids 5')).