Entry information : SmedCMD
Entry ID 4570
Creation 2007-02-09 (Filippo Passardi)
Last sequence changes 2007-02-09 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-05-01 (Christophe Dunand)
Peroxidase information: SmedCMD
Name SmedCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD002]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhizobiaceae Sinorhizobium
Organism Sinorhizobium medicae    [TaxId: 110321 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmedCMD
start..stop
S start..stop
SmeCMD 298 4.07e-106 1..153 1..153
RleCMD 252 7.12e-88 1..153 1..153
RetCMD 250 4.91e-87 1..153 1..153
AtuCMD 229 6.89e-79 1..153 1..153
Literature and cross-references SmedCMD
Literature Copeland,A., et al.

US DOE Joint Genome Institute (JGI-PGF)

Sequencing of the draft genome and assembly of Sinorhizobium
medicae WSM419

Unpublished
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=AATG01000001&itemID=450&view=gbwithparts
Protein ref. GenPept:   EAU07322 UniProtKB_Uniparc:   Q0MNW5
Protein sequence: SmedCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   153
PWM (Da):   %s   17027.68  
PI (pH):   %s   7.11
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQPRLNFAKA APEAYKAVAA LETYVKGSGI EPRLLHLIKL RASQINGCAY CVDMHSKEAR HSGLSEQWIN LVCVWRESPH FDERERAVLG WTEALTNVAE TRAPDHAYEA LRAHFDEEEM 
TKITVAIGTI NVWNRLCVGF RALPPIDAPA KAA 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="WSM419".