Entry information : BamAhpD
Entry ID 4665
Creation 2007-02-15 (Filippo Passardi)
Last sequence changes 2007-02-15 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-05-05 (Christophe Dunand)
Peroxidase information: BamAhpD
Name BamAhpD
Class Alkylhydroperoxidase D    [Orthogroup: AhpD001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia ambifaria    [TaxId: 152480 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BamAhpD
start..stop
S start..stop
BcAhpD 358 2.29e-129 1..175 1..175
BdAhpD 355 6.17e-128 1..175 1..175
BviAhpD 352 1.02e-126 1..174 1..174
BcenAhpD_MC0-3 352 1.29e-126 1..175 1..175
Literature and cross-references BamAhpD
Literature Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Bruce,D., Pitluck,S. and Richardson,P. US DOE Joint Genome Institute (JGI-PGF).
Protein ref. UniProtKB:   B1YS09
DNA ref. GenBank:   CP001025.1 (2069298..2069825)
Protein sequence: BamAhpD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   175 (292)
PWM (Da):   %s   18640.52 (31501.4)  
PI (pH):   %s   6.79 (5.82) Peptide Signal:   %s   cut: 26 range:26-317
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEFIDSIKAR IPDYAKDIRL NLDGTISRSS LEGNDAVGVA LAAAVAAKST VLVKTIREAG VLSPEETNAV LTAAALMGMN NTWYPYVEMA DDADLKTQRA ELRMGAYASH GGVDKRRFEM 
YALAASIVGK CHFCVKSHYA LLKNEQGMTT TQLRDVGRIA SVINAAAQVI AAEGE 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="MC40-6".