The peroxidases and oxidases database
Entry information : RxCMDn
Entry ID 4713
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2009-09-22 (Christophe Dunand)
Peroxidase information: RxCMDn
Name RxCMDn
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn002]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Rubrobacteraceae Rubrobacter
Organism Rubrobacter xylanophilus    [TaxId: 49319 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RxCMDn
start..stop		 S start..stop
SavHCMDn02 187 2.27e-59 6..126 309..429
ScoHCMDn02 181 9.01e-57 3..126 325..447
BlHCMDn 169 1.91e-52 3..127 308..432
NspHCMDn 164 1.1e-50 2..128 276..400
Literature and cross-references RxCMDn
Literature Copeland A. et al.

US DOE Joint Genome Institute. Complete sequence of Rubrobacter xylanophilus DSM 9941. Unpublished. Submitted (12-JUN-2006)
Protein ref. UniProtKB:   Q1AVN9
DNA ref. GenBank:   NC_008148 (1602968..1602582)
Protein sequence: RxCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   128
PWM (Da):   %s   13969.04  
PI (pH):   %s   5.67
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSDPAYERGL RVRREVLGDA HVDRALASAT DFTADFQDFI TRYAWGEVWT RPGLDRKTRS CMTMTALIAA GRLDELEMHV RAALRIGLTP DEIKEVILHS AIYCGVPAAN SAFAVAQRAI 
SGQEDPGG 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="DSM 9941/NBRC 16129". Note that this sequence is immediately preceded by an hydrolase. However, there is no fusion of the two proteins (separated by a STOP codon, and frameshift). pcaB, pcaG and pcaH are also detected.