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Entry information : BdCMDn (BDAG_04193)
Entry ID 4714
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: BdCMDn (BDAG_04193)
Name (synonym) BdCMDn (BDAG_04193)
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn002]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia dolosa    [TaxId: 152500 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdCMDn
start..stop		 S start..stop
RmHCMDn 215 1.09e-70 2..127 265..390
ReHCMDn_H16 214 5.33e-70 2..128 265..391
ReHCMDn_JMP134 206 8.33e-67 2..127 265..390
AauCMDn 162 1.07e-52 4..127 21..144
Literature and cross-references BdCMDn (BDAG_04193)
Literature Birren B. et al. The Broad Institute Genome Sequencing Platform. The Genome Sequence of Burkholderia dolosa (strain AU0158).
Protein ref. UniProtKB:   A2WHB4
DNA ref. GenBank:   CH482381.1 (1849614..1850000)
Protein sequence: BdCMDn (BDAG_04193)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   128
PWM (Da):   %s   14472.39 Transmb domain:   %s   o20-42i89-111o126-148i161-183o
PI (pH):   %s   6.52
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDDQQRYEAG MKVRRAVLGD AHVDRSLENR TEVTDEFQNL ITRYAWGEIW TREGLPRHTR SLLTIAMMVA LNRSEELALH LRAARNNGVT RDEIKEVLLQ TAIYCGVPAA NSAFHLADKI 
FKEQDAAG 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="AUO158". Note that this sequence is immediately preceded by an hydrolase. However, there is no fusion of the two proteins (separated by a STOP codon).