Entry information : LveCMDn (SKA53_03694)
Entry ID 4717
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: LveCMDn (SKA53_03694)
Name (synonym) LveCMDn (SKA53_03694)
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn002]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Loktanella
Organism Loktanella vestfoldensis    [TaxId: 245188 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LveCMDn
start..stop
S start..stop
PdeCMDn 185 5.21e-62 1..125 16..140
SagCMDn 178 2.22e-59 1..122 1..122
CsalHCMDn 124 2.97e-35 5..117 270..382
ScoHCMDn01 122 1.05e-34 7..121 254..368
Literature and cross-references LveCMDn (SKA53_03694)
Literature Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A.,
Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and
Venter,J.C. Direct Submission. Submitted (04-JAN-2006)
Protein ref. UniProtKB:   A3V8Q0
DNA ref. GenBank:   AAMS01000009.1 (60814..60434)
Protein sequence: LveCMDn (SKA53_03694)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   126
PWM (Da):   %s   13761.82  
PI (pH):   %s   7.09
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPDRFAQGMA TRRYVLGDAH VDHAEATKSS FDTPFQTMIT EGAWGTLWSD DTISKRERSM LTLSLLAATG NFEEIPMHIR ATANTGASPQ DVLQAFMHVA IYAGVPKANH AIKLAKQTYK 
EMGVEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="SKA53". Note that this sequence is immediately preceded by an hydrolase. However, there is no fusion of the two proteins: a frameshift occurs that overlaps a few base pairs of the end of the hydrolase and the beginning of the carboxymuconolaconte decarboxylase.