Entry information : GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)
Entry ID 475
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2011-12-14 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-01-11 (Christophe Dunand)
Peroxidase information: GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)
Name (synonym) GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)
Class Class III peroxidase    [Orthogroup: Prx198]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Floral meristems
Seed coats
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx01
start..stop
S start..stop
MtPrx111 548 0 1..342 1..338
MtPrx30 541 0 1..343 1..340
PvPrx01 495 2e-177 24..345 20..341
GmPrx69 484 3e-173 24..349 20..345
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1770847..1771065 219 N° 2 1771697..1771888 192 N° 3 1772919..1773084 166 N° 4 1773348..1773829 482
join(1770847..1771065,1771697..1771888,1772919..1773084,1773348..1773829)


exon

Literature and cross-references GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)
Literature Gijzen,M. The soybean Ep locus encodes the abundant seed coat peroxidase enzyme.
Protein ref. UniProtKB:   O22443
DNA ref. Phytozome 12:   Gm09 (1770847..1773829)
Omic ref. e-FP Browser:   Glyma09g02590
Protein sequence: GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   352 (326)
PWM (Da):   %s   37953.86 (35227.5) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.68 (4.50) Peptide Signal:   %s   cut: 27 range:27-352
Sequence 393
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSMRLLVVALLCAFAMHAGFSVSYAQLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNGDSFGLASVASKDAKQKLVAQSK

Retrieve as FASTA  
Remarks complete sequence from genomic and 46 ESTs and 1 mRNA. Cultivar="Harosoy 63".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGTTCCATGCGTCTATTAGTAGTGGCATTGTTGTGTGCATTTGCTATGCATGCAGGTTTTTCAGTCTCTTATGCTCAGCTTACTCCTACGTTCTACAGAGAAACATGTCCAAATCTGT
TCCCTATTGTGTTTGGAGTAATCTTCGATGCTTCTTTCACCGATCCCCGAATCGGGGCCAGTCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAA
GTACGTACTTTTTTTTTTCCTT
CCAAAATGCCCTGCATATTTAACAAGATTGCTTTGTTCACCTAGAAAAATGTGTTTTTTTCAACGATCTTACGTACGTTTGTTTGGTTTGAAAAATAAATCAGAAAGAGATCAAGAAAAT
AGCTAGAAAGAAAGCAACGTTTTTTTAAAAGGTATTTAGTGTGAGAAAAATATTAAAACTGAAGAGAAAGAAATTAAATAAGCTTTTCTTGAATGATATTTACATGTCTTATTAACTTAA
AGTCACCTTTTTTCTTTAAGTTGTGCTTGAAGAAAAAAGATGTCTTTCAGTTTAGTTTTGATTAATNNNNNNNNNNNNNNNNNNNNNNNNNTTAATACTATATATCTATTTACCATATTA
ATTATTACTATATTTCATGATGACAACAGACAAGTATTCTAAAGAGGTATCGGTAGATGATTAATTTTTTTATAAAAAAATCTTTTGCGTGTATAGATATTCTTTTATAATTGGTGCAGA
AACTTGTAATGCTAATTGCAATTAATCTTACATTGATTAACTAATAGCTATAATCAATATTTAGGTTAGGTATAGGAGACAAATCAAGTGATCTGAACAAATTAAGTTGTTATATTTGCA
TTGTGACAGGGTTGTGATGGATCAGTTTTGCTGAACAACACTGATACAATAGAAAGCGAGCAAGATGCACTTCCAAATATCAACTCAATAAGAGGATTGGACGTTGTCAATGACATCAAG
ACAGCGGTGGAAAATAGTTGTCCAGACACAGTTTCTTGTGCTGATATTCTTGCTATTGCAGCTGAAATAGCTTCTGTTCTG
GTAATTAATAACTCCTAATTAATTCCCAGCCATTAAAAG
TTGCATGATTGGATTCAAAATTCTATGGTATTGGGGTTCTGATATAAATTTGTAATTAAATTGCACTAAAAAAAATTATCATATACTTTTAATAAAATTTTTTTATCTAATTTAATTTAT
TATTAAAACTATTTTTAAAATTCAATCCTAACTCTTTTTTAATCGGAGCATGTAAGCTGGCACCCACCGTATATCGTTGGAAGATGCTATAAAACCATTTAATTAATGGATGGAATCAGT
CAAAACATTTAATTCAAAATACTCTTAATTGTGATTAGTAATCATGTTCGGGCAAGTTACGTTGTGTATAATTAATTTGACTTAATCAGATAAAAAAACAAATGGACGCAAGCCGGTTGG
TATAGATATCACTGGCCTGTAGAATATGTGGTTTTTCACGTTTAAATAAAAGCTAGCTACTATATTATATTTAGTCTTTTTTTTTTCTTAAACCCATTTAACGTGATTTATTGACTGTGA
AACATGTTTCCACACACAGGCTTAGAAACTCCTCGCAACTAACATCTCCAAAATTTGACTATTTATTTATGAAGATAATTCATCTATGATGTTCAACTCTATTATATATATGTATCATCG
CAGTATTAAGAATTATAATAGTCAAATATAGAAGTATATCGGGTAAATGTAGTTGCATGTGCGACCTGTTTCGTGTAAAATGCTTATTCTATATAGCTTTTTTTATTGGAAAATAACAAT
GAACTAAAAACGAAAGAGTATCATATAGTTTGACTTTTATGTTAGAGAGAGACATCTTAATTTGGTCATATGTTAAATAATTAATTACAATGCATACACAAATATTTATGCCATATCTAA
AAAATGATAAAATATCATAGGTATACTCAACTATATGATATCCCCATAACAGAAATTGTACTTTTCTTCAGGCAAAGAACTTAACATTTCTGTTTGCTAAAAACAAACATCCACTTAAAG
TGGTTCAACATATTTATGTAATAATTTACAGGGAGGAGGTCCAGGATGGCCAGTTCCATTAGGAAGAAGGGACAGCTTAACAGCAAACCGAACCCTTGCAAATCAAAACCTTCCAGCACC
TTTCTTCAACCTCACTCAACTTAAAGCTTCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAG
GTATACATAATCAATTTTTTATTTGCTATTAGCTAGCAATAAA
AAGTCTCTGATACAGACATATTTAGATAAATTAATTTCTCCATAAACATTTATAATAAAATTATCAATTTATGTACTTAAAAATTATGGATTGAAGCTCTTTTCATCCAACTTTTACTAA
AGTTAAGGTGCATATAATATAAAATAAACTATCTCTTGTTTCTTATAAAAAGATTGAAGATAAGTTAAAGTCTACTTATAAATCATTAATATATGTATAGGTGGTCATACGTTTGGAAGA
GCTCGGTGCAGTACATTCATAAACCGATTATACAACTTCAGCAACACTGGAAACCCTGATCCAACTCTGAACACAACATACTTAGAAGTATTGCGTGCAAGATGCCCCCAGAATGCAACT
GGGGATAACCTCACCAATTTGGACCTGAGCACACCTGATCAATTTGACAACAGATACTACTCCAATCTTCTGCAGCTCAATGGCTTACTTCAGAGTGACCAAGAACTTTTCTCCACTCCT
GGTGCTGATACCATTCCCATTGTCAATAGCTTCAGCAGTAACCAGAATACTTTCTTTTCCAACTTTAGAGTTTCAATGATAAAAATGGGTAATATTGGAGTGCTGACTGGGGATGAAGGA
GAAATTCGCTTGCAATGTAATTTTGTGAATGGAGACTCGTTTGGATTAGCTAGTGTGGCGTCCAAAGATGCTAAACAAAAGCTTGTTGCTCAATCTAAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGTTCCATGCGTCTATTAGTAGTGGCATTGTTGTGTGCATTTGCTATGCATGCAGGTTTTTCAGTCTCTTATGCTCAGCTTACTCCTACGTTCTACAGAGAAACATGTCCAAATCTGT
TCCCTATTGTGTTTGGAGTAATCTTCGATGCTTCTTTCACCGATCCCCGAATCGGGGCCAGTCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAA
GGTTGTGATGGATCAGTTTTGC
TGAACAACACTGATACAATAGAAAGCGAGCAAGATGCACTTCCAAATATCAACTCAATAAGAGGATTGGACGTTGTCAATGACATCAAGACAGCGGTGGAAAATAGTTGTCCAGACACAG
TTTCTTGTGCTGATATTCTTGCTATTGCAGCTGAAATAGCTTCTGTTCTG
GGAGGAGGTCCAGGATGGCCAGTTCCATTAGGAAGAAGGGACAGCTTAACAGCAAACCGAACCCTTGCAA
ATCAAAACCTTCCAGCACCTTTCTTCAACCTCACTCAACTTAAAGCTTCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAG
GTGGTCATACGTTTGGAAGAGCTC
GGTGCAGTACATTCATAAACCGATTATACAACTTCAGCAACACTGGAAACCCTGATCCAACTCTGAACACAACATACTTAGAAGTATTGCGTGCAAGATGCCCCCAGAATGCAACTGGGG
ATAACCTCACCAATTTGGACCTGAGCACACCTGATCAATTTGACAACAGATACTACTCCAATCTTCTGCAGCTCAATGGCTTACTTCAGAGTGACCAAGAACTTTTCTCCACTCCTGGTG
CTGATACCATTCCCATTGTCAATAGCTTCAGCAGTAACCAGAATACTTTCTTTTCCAACTTTAGAGTTTCAATGATAAAAATGGGTAATATTGGAGTGCTGACTGGGGATGAAGGAGAAA
TTCGCTTGCAATGTAATTTTGTGAATGGAGACTCGTTTGGATTAGCTAGTGTGGCGTCCAAAGATGCTAAACAAAAGCTTGTTGCTCAATCTAAATAA

Retrieve as FASTA