View Redoxidase 475

Entry information : GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)

Entry ID	475
Creation	2006-08-28 (Christophe Dunand)
Last sequence changes	2011-12-14 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2012-01-11 (Christophe Dunand)

Peroxidase information: GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)

Name (synonym)

GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)

Class

Class III peroxidase [Orthogroup: Prx237]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue types

Floral meristems
Seed coats
Stems

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx01 start..stop	S start..stop
MtPrx111	548	0	1..342	1..338
MtPrx30	541	0	1..343	1..340
PvPrx01	495	1.69e-177	24..345	20..341
GmPrx69	484	3.27e-173	24..349	20..345

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '475' 'join(1770847..1771065,1771697..1771888,1772919..1773084,1773348..1773829)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1770847..1771065	217	N° 2	1771697..1771888	190	N° 3	1772919..1773084	164	N° 4	1773348..1773829	480
join(1770847..1771065,1771697..1771888,1772919..1773084,1773348..1773829)

Literature and cross-references GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)

Literature	Gijzen,M. The soybean Ep locus encodes the abundant seed coat peroxidase enzyme.
Protein ref.	UniProtKB: O22443
DNA ref.	Phytozome 12: Gm09 (1770847..1773829)
Omic ref.	e-FP Browser: Glyma09g02590

Protein sequence: GmPrx01 (SPOD4.1 / Glyma09g02590.1 / SBP)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	352 (326)
PWM (Da):	37953.86 (35227.5)	Transmb domain:	i7-29o
PI (pH):	4.68 (4.50)	Peptide Signal:	cut: 27 range:27-352

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGSMRLLVVALLCAFAMHAGFSVSYAQLTPTFYRETCPNLFPIVF
GVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSG
GHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGV
LTGDEGEIRLQCNFVNGDSFGLASVASKDAKQKLVAQSK

Retrieve as FASTA

Remarks

complete sequence from genomic and 46 ESTs and 1 mRNA. Cultivar="Harosoy 63".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTTCCATGCGTCTATTAGTAGTGGCATTGTTGTGTGCATTTGCTATGCATGCAGGTTTTTCAGTCTCTTATGCTCAGCTTACTCCTACGTTCTACAGAGAAACATGTCCAAATCTG
TTCCCTATTGTGTTTGGAGTAATCTTCGATGCTTCTTTCACCGATCCCCGAATCGGGGCCAGTCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAAAAGTACGTACTTTTTTTTTTC
CTTCCAAAATGCCCTGCATATTTAACAAGATTGCTTTGTTCACCTAGAAAAATGTGTTTTTTTCAACGATCTTACGTACGTTTGTTTGGTTTGAAAAATAAATCAGAAAGAGATCAAGAA
AATAGCTAGAAAGAAAGCAACGTTTTTTTAAAAGGTATTTAGTGTGAGAAAAATATTAAAACTGAAGAGAAAGAAATTAAATAAGCTTTTCTTGAATGATATTTACATGTCTTATTAACT
TAAAGTCACCTTTTTTCTTTAAGTTGTGCTTGAAGAAAAAAGATGTCTTTCAGTTTAGTTTTGATTAATNNNNNNNNNNNNNNNNNNNNNNNNNTTAATACTATATATCTATTTACCATA
TTAATTATTACTATATTTCATGATGACAACAGACAAGTATTCTAAAGAGGTATCGGTAGATGATTAATTTTTTTATAAAAAAATCTTTTGCGTGTATAGATATTCTTTTATAATTGGTGC
AGAAACTTGTAATGCTAATTGCAATTAATCTTACATTGATTAACTAATAGCTATAATCAATATTTAGGTTAGGTATAGGAGACAAATCAAGTGATCTGAACAAATTAAGTTGTTATATTT
GCATTGTGACAGGGTTGTGATGGATCAGTTTTGCTGAACAACACTGATACAATAGAAAGCGAGCAAGATGCACTTCCAAATATCAACTCAATAAGAGGATTGGACGTTGTCAATGACATC
AAGACAGCGGTGGAAAATAGTTGTCCAGACACAGTTTCTTGTGCTGATATTCTTGCTATTGCAGCTGAAATAGCTTCTGTTCTGTGGTAATTAATAACTCCTAATTAATTCCCAGCCATT
AAAAGTTGCATGATTGGATTCAAAATTCTATGGTATTGGGGTTCTGATATAAATTTGTAATTAAATTGCACTAAAAAAAATTATCATATACTTTTAATAAAATTTTTTTATCTAATTTAA
TTTATTATTAAAACTATTTTTAAAATTCAATCCTAACTCTTTTTTAATCGGAGCATGTAAGCTGGCACCCACCGTATATCGTTGGAAGATGCTATAAAACCATTTAATTAATGGATGGAA
TCAGTCAAAACATTTAATTCAAAATACTCTTAATTGTGATTAGTAATCATGTTCGGGCAAGTTACGTTGTGTATAATTAATTTGACTTAATCAGATAAAAAAACAAATGGACGCAAGCCG
GTTGGTATAGATATCACTGGCCTGTAGAATATGTGGTTTTTCACGTTTAAATAAAAGCTAGCTACTATATTATATTTAGTCTTTTTTTTTTCTTAAACCCATTTAACGTGATTTATTGAC
TGTGAAACATGTTTCCACACACAGGCTTAGAAACTCCTCGCAACTAACATCTCCAAAATTTGACTATTTATTTATGAAGATAATTCATCTATGATGTTCAACTCTATTATATATATGTAT
CATCGCAGTATTAAGAATTATAATAGTCAAATATAGAAGTATATCGGGTAAATGTAGTTGCATGTGCGACCTGTTTCGTGTAAAATGCTTATTCTATATAGCTTTTTTTATTGGAAAATA
ACAATGAACTAAAAACGAAAGAGTATCATATAGTTTGACTTTTATGTTAGAGAGAGACATCTTAATTTGGTCATATGTTAAATAATTAATTACAATGCATACACAAATATTTATGCCATA
TCTAAAAAATGATAAAATATCATAGGTATACTCAACTATATGATATCCCCATAACAGAAATTGTACTTTTCTTCAGGCAAAGAACTTAACATTTCTGTTTGCTAAAAACAAACATCCACT
TAAAGTGGTTCAACATATTTATGTAATAATTTACAGGGAGGAGGTCCAGGATGGCCAGTTCCATTAGGAAGAAGGGACAGCTTAACAGCAAACCGAACCCTTGCAAATCAAAACCTTCCA
GCACCTTTCTTCAACCTCACTCAACTTAAAGCTTCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAGAGGTATACATAATCAATTTTTTATTTGCTATTAGCTAG
CAATAAAAAGTCTCTGATACAGACATATTTAGATAAATTAATTTCTCCATAAACATTTATAATAAAATTATCAATTTATGTACTTAAAAATTATGGATTGAAGCTCTTTTCATCCAACTT
TTACTAAAGTTAAGGTGCATATAATATAAAATAAACTATCTCTTGTTTCTTATAAAAAGATTGAAGATAAGTTAAAGTCTACTTATAAATCATTAATATATGTATAGGTGGTCATACGTT
TGGAAGAGCTCGGTGCAGTACATTCATAAACCGATTATACAACTTCAGCAACACTGGAAACCCTGATCCAACTCTGAACACAACATACTTAGAAGTATTGCGTGCAAGATGCCCCCAGAA
TGCAACTGGGGATAACCTCACCAATTTGGACCTGAGCACACCTGATCAATTTGACAACAGATACTACTCCAATCTTCTGCAGCTCAATGGCTTACTTCAGAGTGACCAAGAACTTTTCTC
CACTCCTGGTGCTGATACCATTCCCATTGTCAATAGCTTCAGCAGTAACCAGAATACTTTCTTTTCCAACTTTAGAGTTTCAATGATAAAAATGGGTAATATTGGAGTGCTGACTGGGGA
TGAAGGAGAAATTCGCTTGCAATGTAATTTTGTGAATGGAGACTCGTTTGGATTAGCTAGTGTGGCGTCCAAAGATGCTAAACAAAAGCTTGTTGCTCAATCTAAATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA