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Entry information : PatCMD
Entry ID 4768
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: PatCMD
Name PatCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Pseudoalteromonadaceae Pseudoalteromonas
Organism Pseudoalteromonas atlantica    [TaxId: 288 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PatCMD
start..stop		 S start..stop
HhCMD 113 6.32e-34 5..112 4..111
BUspCMD 88 3.95e-24 8..111 5..109
MacCMD02 86 2.65e-23 4..114 2..109
NwCMD 83 3.21e-22 5..113 3..111
Literature and cross-references PatCMD
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of Pseudoalteromonas atlantica T6c. Unpublished

Protein ref. GenBank:   ABG41189.1 UniProtKB:   Q15SE9
DNA ref. GenBank:   CP000388 (3260762..3261124)
Protein sequence: PatCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   120 (714)
PWM (Da):   %s   12739.46 (78449.4)  
PI (pH):   %s   4.63 (6.64) Peptide Signal:   %s   cut: 28 range:28-741
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQPTDHINTY QKLQDLSAKL ISEIPETMAG FGELHVNAVA KGALDNKTKE LIALSIAISV RCNGCIAFHV HDALKAGANR QEIVETIGVA ILMGGGPSMV YGCEALEALD QFELNQDLPL 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="T6c / BAA-1087".
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