Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
219 |
PWM (Da): |
24039.29 |
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PI (pH):
| 6.8 |
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Sequence 315
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MPGLTIGDSLPNLQVDTTHGKINLHDYVGDSFTIIFSHPGDFTPVCTTELGAMAAYADKFAQRGVKLLGLSCDDVQSHKEWIKDIEAYKGKKVTYPIAADPNREIIKQLNMVDPDEKDASGQNLPSRALHIVGPDKKIKLSFLYPASTGRNMDEVVRALDSLIKASQHKIATPVNWKEGEPVVIAPSVSNDEARKMFPKGFQTVDLPSNKDYLRFTSV* |
Retrieve as FASTA
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Remarks |
Complete sequence from Genomic (3 introns) and 25 ESTs. Isolate="HIDATSA1" and "HIDATSA2", cultivar="RHA801". "A" added at position 16 of cDNA (based on other homologs). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCTGGCCTAACCATCGGAGACTCCCTCCCCAACCTCCAAGTTGACACCACTCATGGCAAGATCAATCTGCATGACTATGTTGGCGACTCATTCACCATCATCTTCTCTCACCCTGGT TCGTCTTTTCCTTTCCCTTTGAAATAACAATTCATATCATATATTTTTCAAGTTGAAAATAGTGCAGGTGACTTCACGCCTGTTTGCACGACCGAGCTGGGGGCGATGGCGGCATACGCT GACAAGTTTGCCCAGAGGGGTGTGAAGCTGTTGGGGTTATCCTGTGATGATGTCCAGTCTCACAAGGAGTGGATCAAAGATATTGAAGCCTATAACGTATGTATATGTATATGTATATGT ATATGTATATGTATATGTATACTCATCAATCAAAACCTACCTGTTAATACTATTGTGATGTTGGTGCAGAAGGGAAAGAAGGTGACGTACCCGATCGCTGCTGATCCCAACCGGGAGATC ATCAAGCAGCTCAACATGGTGGATCCTGATGAGAAAGATGCTTCTGGACAGAACCTCCCCTCTCGTGCTCTGCACATTGTTGGCCCCGACAAAAAGGTACTATATGATATTGTTTGAAAA GTGTGTATATATATAAATATATATGTTGATGAATGGATCGTGTTGTGTAGATAAAGTTGAGCTTCCTGTATCCTGCGAGCACGGGAAGGAACATGGACGAGGTGGTGAGGGCGCTGGACT CCTTGATCAAGGCTTCCCAGCACAAAATAGCCACTCCGGTCAACTGGAAGGAGGGTGAACCAGTTGTCATCGCTCCCAGCGTCTCCAACGATGAGGCCAGGAAAATGTTTCCCAAGGGCT TTCAGACAGTTGATCTCCCATCCAACAAGGACTATCTTCGTTTTACTAGTGTTTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCTGGCCTAACCATCGGAGACTCCCTCCCCAACCTCCAAGTTGACACCACTCATGGCAAGATCAATCTGCATGACTATGTTGGCGACTCATTCACCATCATCTTCTCTCACCCTGGT GACTTCACGCCTGTTTGCACGACCGAGCTGGGGGCGATGGCGGCATACGCTGACAAGTTTGCCCAGAGGGGTGTGAAGCTGTTGGGGTTATCCTGTGATGATGTCCAGTCTCACAAGGAG TGGATCAAAGATATTGAAGCCTATAACAAGGGAAAGAAGGTGACGTACCCGATCGCTGCTGATCCCAACCGGGAGATCATCAAGCAGCTCAACATGGTGGATCCTGATGAGAAAGATGCT TCTGGACAGAACCTCCCCTCTCGTGCTCTGCACATTGTTGGCCCCGACAAAAAGATAAAGTTGAGCTTCCTGTATCCTGCGAGCACGGGAAGGAACATGGACGAGGTGGTGAGGGCGCTG GACTCCTTGATCAAGGCTTCCCAGCACAAAATAGCCACTCCGGTCAACTGGAAGGAGGGTGAACCAGTTGTCATCGCTCCCAGCGTCTCCAACGATGAGGCCAGGAAAATGTTTCCCAAG GGCTTTCAGACAGTTGATCTCCCATCCAACAAGGACTATCTTCGTTTTACTAGTGTTTAG |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACAAATGCCT GGCCTAACCA TCGGAGACTC CCTCCCCAAC CTCCAAGTTG ACACCACTCA TGGCAAGATC AATCTGCATG ACTATGTTGG CGACTCATTC ACCATCATCT TCTCTCACCC
TGGTGACTTC ACGCCTGTTT GCACGACCGA GCTGGGGGCG ATGGCGGCAT ACGCTGACAA GTTTGCCCAG AGGGGTGTGA AGCTGTTGGG GTTATCCTGT GATGATGTCC AGTCTCACAA
GGAGTGGATC AAAGATATTG AAGCCTATAA CAAGGGAAAG AAGGTGACGT ACCCGATCGC TGCTGATCCC AACCGGGAGA TCATCAAGCA GCTCAACATG GTGGATCCTG ATGAGAAAGA
TGCTTCTGGA CAGAACCTCC CCTCTCGTGC TCTGCACATT GTTGGCCCCG ACAAAAAGAT AAAGTTGAGC TTCCTGTATC CTGCGAGCAC GGGAAGGAAC ATGGACGAGG TGGTGAGGGC
GCTGGACTCC TTGATCAAGG CTTCCCAGCA CAAAATAGCC ACTCCGGTCA ACTGGAAGGA GGGTGAACCA GTTGTCATCG CTCCCAGCGT CTCCAACGAT GAGGCCAGGA AAATGTTTCC
CAAGGGCTTT CAGACAGTTG ATCTCCCATC CAACAAGGAC TATCTTCGTT TTACTAGTGT TTAGAACCTA GCTACCTTnC ATATAATAAT AATAATATGA AATAACAAAC TTTCTATGCA
TGCATACGTT TGACTTTATT ACTTAT
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Retrieve as FASTA
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