The peroxidases and oxidases database
Entry information : VvPrxII06 (VvPrxIIF)
Entry ID 5131
Creation 2007-04-06 (Christophe Dunand)
Last sequence changes 2007-04-06 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2009-02-26 (Christophe Dunand)
Peroxidase information: VvPrxII06 (VvPrxIIF)
Name (synonym) VvPrxII06 (VvPrxIIF)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue types Berries
Flowers
Inflorescences
Leaves
Mixed tissues
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrxII06
start..stop		 S start..stop
CclPrxII05 327 1.23e-115 1..199 24..224
CsPrxII05 323 1.08e-114 1..199 3..203
NtPrxII06a 323 1.27e-114 1..199 1..193
IbPrxII06 322 3.46e-114 1..199 1..193
Literature and cross-references VvPrxII06 (VvPrxIIF)
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome.
DNA ref. GenBank:   AM460212 (4879..10735)   CAAP02000090.1 (186569..192496) [Mismatch]
Cluster/Prediction ref. UniGene:   Vvi.8127
Protein sequence: VvPrxII06 (VvPrxIIF)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199 (325)
PWM (Da):   %s   21574.22 (35760.2)  
PI (pH):   %s   9.01 (6.51) Peptide Signal:   %s   cut: 23 range:23-347
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASRILKRSM MMKSTVESLR IAAASRHYAS VTVGTDLVSA AADVRLQKAR TWDEGVSSKF STTPLKELFK DKKVVIFGLP GAYTGVCSAQ HVPSYKKNVD KFKAKGIDSL ICVAVNDPYT 
LNAWAEKLEA KDAIEFYGDF DGSFHKSLDL EVDLSAALLG PRSHRWSAYV VDGKVKALNI ESAPSEVKVS GADVILEQI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 4 introns, uncorrect prediction with FGENESH) and 37 ESTs (UniGene and 3 TC: TC52205, TC59921 (frame shift) and TC58425 (2 extra AA in IAAAS)). Also extra AAA in the genomic. Cultivar="Pinot Noir", "Muscat Hamburg", "PN40024" and "Cabernet Sauvignon".