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Entry information : VvPrxII06 (VvPrxIIF)
Entry ID 5131
Creation 2007-04-06 (Christophe Dunand)
Last sequence changes 2007-04-06 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2009-02-26 (Christophe Dunand)
Peroxidase information: VvPrxII06 (VvPrxIIF)
Name (synonym) VvPrxII06 (VvPrxIIF)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue types Berries
Flowers
Inflorescences
Leaves
Mixed tissues
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrxII06
start..stop		 S start..stop
CclPrxII05 327 1.26e-115 1..199 24..224
CsPrxII05 323 1.1e-114 1..199 3..203
NtPrxII06a 323 1.29e-114 1..199 1..193
IbPrxII06 322 3.53e-114 1..199 1..193
Literature and cross-references VvPrxII06 (VvPrxIIF)
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome.
DNA ref. GenBank:   AM460212 (4879..10735)  CAAP02000090.1 (186569..192496) [Mismatch]
Cluster/Prediction ref. UniGene:   Vvi.8127
Protein sequence: VvPrxII06 (VvPrxIIF)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199 (325)
PWM (Da):   %s   21574.22 (35760.2) Transmb domain:   %s   i13-35o
PI (pH):   %s   9.01 (6.51) Peptide Signal:   %s   cut: 23 range:23-347
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASRILKRSM MMKSTVESLR IAAASRHYAS VTVGTDLVSA AADVRLQKAR TWDEGVSSKF STTPLKELFK DKKVVIFGLP GAYTGVCSAQ HVPSYKKNVD KFKAKGIDSL ICVAVNDPYT 
LNAWAEKLEA KDAIEFYGDF DGSFHKSLDL EVDLSAALLG PRSHRWSAYV VDGKVKALNI ESAPSEVKVS GADVILEQI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 4 introns, uncorrect prediction with FGENESH) and 37 ESTs (UniGene and 3 TC: TC52205, TC59921 (frame shift) and TC58425 (2 extra AA in IAAAS)). Also extra AAA in the genomic. Cultivar="Pinot Noir", "Muscat Hamburg", "PN40024" and "Cabernet Sauvignon".