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Entry information : MtAPx[P]03 ( Medtr5g008440.1[4.0] / Medtr5g008440.1[3.5] / Medtr5g008500.1[3.0])
Entry ID 5133
Creation 2007-04-06 (Christophe Dunand)
Last sequence changes 2015-02-05 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Catherine Mathe
Last annotation changes 2016-05-03 (Catherine Mathe)
Peroxidase information: MtAPx[P]03 ( Medtr5g008440.1[4.0] / Medtr5g008440.1[3.5] / Medtr5g008500.1[3.0])
Name (synonym) MtAPx[P]03 ( Medtr5g008440.1[4.0] / Medtr5g008440.1[3.5] / Medtr5g008500.1[3.0])
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtAPx[P]03
start..stop		 S start..stop
MtAPx01 312 2.44e-109 36..206 80..250
CarAPx01 302 2.11e-106 36..206 7..177
GmAPx01 301 3.34e-105 3..206 51..250
PsAPx01 301 4.4e-105 36..206 80..250
Literature and cross-references MtAPx[P]03 ( Medtr5g008440.1[4.0] / Medtr5g008440.1[3.5] / Medtr5g008500.1[3.0])
Literature Debelle,F., Samain,S., Fouteau,S., Zuber,A., Dudez,A., Gouzy,J., Segurens,B., Wincker,P., Couloux,A., Scarpelli,C., Quetier,F. and
Weissenbach,J. Medicago truncatula chromosome 5 sequencing
DNA ref. Phytozome 12:   MtChr5 (1607069..1606284)
Cluster/Prediction ref. Phytozome Gene 12:   31086206 [Incorrect prediction]
Protein sequence: MtAPx[P]03 ( Medtr5g008440.1[4.0] / Medtr5g008440.1[3.5] / Medtr5g008500.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   206
PWM (Da):   %s   22736.75  
PI (pH):   %s   4.72
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQTQTPALNA SRKKLVELIE TSRNVWLIFH WKSKVILEPL KEQFLIISYV DFYQLSGVVA VEITGGPEVP FHPGGEDKPE PPLEGRLPDA TEGSNHLRDV FGKSMGLSDQ DIVALSGxHT 
IGAAHKERSG FEGPWTSNPL IFDNSYFTKL LGGEKEGLLQ LPSDKALLSD LVFRLLVEKY VADEDAFFAD YVEARQKLFE LGFAEA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron), incorrect prediction. Frame shift between VALS and HTIG. No EST. Probably a pseudogene.
DNA ►
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CDS►
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