RedOxiBase: View Perox 5135

Entry information : MtAPx07-A ( Medtr3g088160.2[4.0] / Medtr3g100720.1[3.5] / MtAPx07-a)

Entry ID	5135
Creation	2007-04-06 (Christophe Dunand)
Last sequence changes	2016-04-07 (Catherine Mathe)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-04-07 (Christophe Dunand)

Peroxidase information: MtAPx07-A ( Medtr3g088160.2[4.0] / Medtr3g100720.1[3.5] / MtAPx07-a)

Name (synonym)

MtAPx07-A ( Medtr3g088160.2[4.0] / Medtr3g100720.1[3.5] / MtAPx07-a)

Class

Ascorbate peroxidase [Orthogroup: APx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

Thylakoid-bound

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtAPx07-A start..stop	S start..stop
MtAPx07-B	796	0	1..387	1..387
GmAPx07	654	0	1..386	1..382
GmAPx08	634	0	61..387	36..366
RrAPx01	622	0	63..387	35..361

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	39980002..39980232	231	N° 2	39980317..39980448	132	N° 3	39982042..39982162	121	N° 4	39982236..39982336	101
N° 5	39982425..39982512	88	N° 6	39982929..39982996	68	N° 7	39983087..39983173	87	N° 8	39985113..39985187	75
N° 9	39985327..39985404	78	N° 10	39985497..39985601	105	N° 11	39985805..39985876	72	N° 12	39986024..39986029	6
join(39980002..39980232,39980317..39980448,39982042..39982162,39982236..39982336 ,39982425..39982512,39982929..39982996,39983087..39983173,39985113..39985187,399 85327..39985404,39985497..39985601,39985805..39985876,39986024..39986029)

Literature and cross-references MtAPx07-A ( Medtr3g088160.2[4.0] / Medtr3g100720.1[3.5] / MtAPx07-a)

Protein ref.	UniProtKB: G7J4Y3
DNA ref.	Phytozome 12: chr3 (39980002..39986029)
Cluster/Prediction ref.	Phytozome Gene 12: 31057726 UniGene: Mtr.6518

Protein sequence: MtAPx07-A ( Medtr3g088160.2[4.0] / Medtr3g100720.1[3.5] / MtAPx07-a)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	388
PWM (Da):	42058.43
PI (pH):	9.16

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MADRVLLTPSLSSSPTTMATITGGAAARMIPSATRATVSLSTSRSFFSFSLASSSRSVSSLNCLRSSPRISHIFLNQRRGEVRVSSGRFGTVAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAVDQEAFFKDYAEAHAKLSNLGAKFEPAEGVVVDGSPNVVGEKFVAAKYSSGKE*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 55 ESTs. Possible splicing variant MtAPx07-b. UniGene Mtr.6518 also contains ESTs from the MtAPx07-b, however they cannot be distinguished (except for 3 ESTs, see Remarks in MtAPx07-b).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAGACCGTGTGTTACTCACTCCTTCACTCTCTTCTTCACCAACCACAATGGCTACTATCACCGGCGGCGCCGCCGCACGCATGATTCCCTCCGCCACTAGAGCCACCGTCTCACTT
TCAACTTCCCGTTCGTTCTTCTCATTTTCATTGGCATCTTCTTCCCGTTCCGTTTCCTCGCTCAATTGCTTGCGTTCTTCTCCTCGCATTTCTCACATCTTTCTCAATCAGGTTTCGTTT
CGCTATTTCTCGTTGATGATTTTTTTTAGCATTTTTTTTAGTTCGTTTGTATTAATTCCGTTTGCGATTTTTCAGCGAAGAGGAGAAGTTCGCGTTTCGAGTGGACGATTCGGAACGGTT
GCCTTTGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTTAAGACTAAGTTCTGTCATCCTCTTTTGGTAATTTTCAGTGCTTTTTTTCTTGGATTTTGT
TTAATTTTTTATGATTTTTCTGTGCATTGCATTTGATTTAGCGTTTTCTTTGTCTGGAATTGAAGTTGTATAACGTAAGCTTCAATAATTGATTTTTCTGTAATTTTATGGTGACTGAAC
AGCTTTATAACAGCTTATTTGCAGCTTATAGGACAAACACTTATCATGATAAGCACTTATGTATAAGTTTGCATTAGCTTTTTTTATAGCAGAACATACAATAACGTTAAATTGTTTTTG
AACATGCTATAAGTTGTTTTTATAAGCTATATTGGAGAACTTATGAAAATAAGTTGAAAAAAGCTTATGAAACCAGTCATAAGCTGTTTTCATAAGTTCTCTTAAACAGTCTCACAAAAC
TTATGCTAGTAGATAAGCTCAAACAAGCCAATCCAAACAGACCCTAATCCTCTTGATATCCAAGGTGAAAATAAGTCAAGAGTATATTTGGTTTCATTTTTGGAGCTGCCAATTTATTTT
AGAGACGTAGAATCAATTTAACAATGTTTGGGTGTTTTTTGGTAGGATTGATTTTGCCTGAATTAATTCTAACTGGAAGCTAGGGTCTTTAGTTTTTGTTTCTAAACATGATTTTTACTC
TTAACTTATATTGTTCAACAACTCAGATTTACAAATATGTATCCAAACATAAACCACTTCCATTTAACTCACTTTTAACTAAAATCAATTCATTCTGAATCAATTTTTTGTCACGTCATT
GCAGAACCAAACACACATTAAGTAACTAAGTTCCTTGGTCAGTGACTCATATTATTAGGGGCTTGCATTCTCTATTATTTTATATTCTCGTTTTTTATTAACTTTCTTCTTCAAATTGAT
ATGTGAAGTCATACATATATTTTTCAATGTTATGGTTCTTATTTCAAGATTAGGAGTTTTTTCTATAATTCTATTGTTGAATTTCCGGTTTTAGTGTTCCATTAACAGTGTCTTTGCTGG
TCGTTGTTTGATGATTGATACAAAAATGTTTACGATACACTATAAATTGTCGGGCGAATCTCTCCTACAAAGACTAGTGCAAAGCACTTGTGCAACATGTGTATGCAGTGTCCTGATTAT
ACCTCTACTATATCTTTCTACTTAAAACTCACTTAAAAAGAGAAAACAAACTAAAGCATCAGCTAATTGGCCAACATGATATTGTGGCATAGAATAGAATCTCTGTAGCACTGACACCTC
TGTTCGAAGGCGTGCCGGTGTCCGAAACCGACACATGTGCTTACATTAAATTAATTAATTTTTTTTCAAATTAACAAAGGTGTCGACTTGTCGGTGTCAGTGTCGATGCTTCAAAGAATA
GAGTACTCTTTGCATCACATTTACCGTAAGAGATTTATAGCTTTACAGTGCGAAATGATTCAAAGATGATGAATAAACTTTACTGCGACTAAAATGATTCAGTCAGCCTAGTTATCAAAC
TCTGAGTTGATGAGATATACCAGCCACATATAGATGGAACTTTGTCATATGATTTGTAGCATAGGTGTGAACTCTATTTTCTTTTCATTGTGATGGTTCACACATACTTTTATGTTACAG

ATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCT
GGTATGTATTCATTAACCACCAGTTGTATCTGAATATTGCTCGTGGTAATTATTCCTATGAGCTGCAATTTCAGGCCTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATA
TTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTAGTGCTACAGCTGTGGAGGTTGTCTAAGTCCTACTTTGACTTCAAGATTGATTGTTGTCTATTTGAAATAATTAAATGATACT
GACCGTTTTCTTTGAATCTTCAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTTGACGTCACTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGGTAAAACCC
ATATATCTAATTGAAGTAATATTGTGATTTAAACTTTCTTCTTTGCCTCTAGGATTCTAGGACATGGATTGGATAAGCTACTGTTAATTTGGGAATATGAAACAGAGAGACAATAAGTTT
TTTATTAGGCATCTATTAACTAACAGTTGGCCATATAGAAATGGCTGTGCTCGCATATTTAACTTCTATCGTTACATTCTGTTATATCACGCTTTTATAACTGATGATATGATGTCTTTG
TTGGTTTTGGTTCGGTTTTGTATATGATTTTCCAATGTAAACAAACAATTTGGACAGGTTTAATTTGGTCGTTTAGATTTCTGGGTTGTTAACACTTAACAGCCCTAGTTACTAGTTTTT
TCGGTTGCTAACTACTTTTATTTTTATTTTTTTATTTATGTATTTAGATGCTGGCCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGGTTGAATGACAAGGTAAT
TCCCTGTGTTTATTATAAGGCTGGGGGTAAGTATTGGACTGTAGCTTTATGTCTGATCTTGACTATCACGTTATTGTATCCGCAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGG
GCGGTCTAGACCAGACCGCAGTGGCTGGGGCAAACCTGAGACTAAATACACGGTATACTATCTGCCTTTTTACCCTCAAGCTATTAAACATGATTTTGAAAGAGTGCTGAACTATTGCAA
AACTACAGTCTAATTTTAATATTTGATGGTAAATAATCGTTTGAATGGATGGTTGTTTTATGTTAAATCTTTTTATACTGAATTGGATGATGACCACTGCTTTTTATAACTCATCTCCTT
TATAACACCTTCAAGTCATTTGGTTGAGCCTAGAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTGGTTTTGTAGGGTTGAGTTAGACTTGAGCCAAATTTCAAGAGATATGAATA
CAATGAGTGTTTGTCGTTACTCCGTTTGTGTAGACATTCCGTGTCTTACATCAGTTTACTTTTAAGAAATGTAAACCTAAATCTTTGCTACGATTGTTTCTTTCTGTCTTTAATAGTTCT
TATGCCAACTATATATAATCTTAAGTATACAGACCTGTCAAGTTTTGTGCATCTCCAGAGCTAGTTTACATGATGATCAAATAGTTTTTGAATGGAATGATATCTGAAATCAATAAAACA
ATATAAGATTCATGTGTATTTTGATAGAAATCAACTGATATAGAAGAATAAAATAGGGAAAATCCCTTTGATTACAGAATAATATTGCAGAACTTCGAGGGTCTGCACCTCCCTATTGCC
TAAATGGCCCCTTCCCAGTCAAATCCTCAGATGCCCCTCAATCTTCCCATCCCTCCCCTATTTATTCTTAAAACTTAACCTCCCACTACTGACTTAATTAATTATTAATCATAATATAAT
AATAAACCATAACTGCAAAATTAACTACTATAATTATAATAAAACTGACACAATTCTAATAAGATATCCAACAATACTCCCCCCCTAAAGATTCACCTTGTCCTCAAGGTGAAGGATATC
ATAAGTGTCCACCTGGGTCCCATAACTTGAAGTATAATGACAGAGCACTGTGTGAATCATGCAAACTTATGCCTTGATCATATACCCTGTTTGTGGTGATATTTTTTAGCAAAAAATACA
GGATGATTGATGTCGTGGTGCCCACAGTAGTTCCCCTTATCTCTGACCCCATACTCATTTCTTTATTGCAAAGAAGTTTGCACAAATCTGTTTTGCTCTCCTGTCCCATTTCCACAATCA
TGACATGCATATGGACATTTTCTACATCTCTCTCTATTTTCCCCATTTCTACATCTTCCCAACCTTTCTCTTCTCCTATCGCGGTGGGATTTGGATTGCCCTGGTCAATATCTTGTGGTT
GAATATTGAATGAACCTTGAGTCGTCAACCACTCCAATTCAGTTTCAGGTTCCTCTTCTTCATCAGACATAGGCATGATATCCCGATATTCCGGTTTAAAACGCCAAATAAATGCAAGTA
AGAACATATGCCAACTAACCTGTTGATGGCGTCGATTCCACCAGTGTGACCATTGGCGAGCACGACCTCTGAGTAACATCAACGCATCTGTCAGCTTCTCCTCATCTGGTGTATCTCTCT
TTTTGAAATGTTCCTCAATGCATAGCAGCCACCAGTATGCATCTTCTTTGCCATCAAACACTCGAAACTCCATTTCTTCCATAACGGTACAGCGGTTCCAAGATCGATGCTCTGATACCA
GTTGATAGAAATCAACTGATATAGAAGAATAAAATAGGGAAAATCCCTTTGATTACAGAATAATATTGCAGAACTTCGAGGGTCTGCACCTCCCTATTGCCAAAATGGCCCCTTCCCAGT
CAAATCCTCAGATGCCCCTCAATCTTCCCATCCCTCCCCTATTTATTCTTAAAACTTAACCTCCCACTACTGACTTAATTAATTATTAATCATAATATAATAATAAACCATAACTGCATA
ATTAACTACTATAATTATAATAAAACTGACACAATTCTAATAAGATATCCAACATATTTCTCATTCTACAGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGT
TAAAGTTTGACAACTCTTACTTCAAGGTCAGATATTTTTAATTTATTTTTTGATTATTTTGTTGGGAGGGGAGGGGGTGATTGTATAACAGTATAGGAAGAAGGGAAGAGGAGAGGGGAG
TATGCATAGTCTACTTTTTCTTTTTGTAATTATTGTTACATACAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTC
AAGGTAAAGTTGCTGAATTTTTTTCCCATGTCCATTTTAATTCAACATAAAATTAAACTGTGATATACCCATAAAATTATTTGTGAAATATGCAGGTATATGCTGAGAAATATGCTGTAG
ATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCAAAGTTTGAACCTGCAGAGGTCTGTTCACGTTGAGCTACTGTTTTGTGCATTTTGAGAT
GGGTGTGCTTATTATGTGATTACTGACCTAGATATTATGTTCTTTCATACAAAATTTATTACCTTTTCTTTTTCATGTCTGCATACATATTTGATTTGAGTTCAAATAACAAGACAGTTG
ACCAAATCACCTATTAAAGTTTTCTTTGTTATCTGTTTTTCAGGGCGTTGTGGTAGATGGTTCTCCAAATGTAGTGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGGTTTT
AAGCTTGCACGATTTATTAAATTTTACTATTCATTTTCTTGATGCTTGTCGGAAATTTATTATATATAATTTAATGAAAGGTTTGCATAGAATACATATTTTGCATATTGTTCATTGTTT
CTATATTCCTGGTTTGATGCAGGAGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA