Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
492 |
PWM (Da): |
56531.11 |
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PI (pH):
| 7.01 |
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Sequence 533
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 2, 2 introns), 9 cDNA and 763 ESTs. Cultivar=Indica" and "Japonica". |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCCTTGCAAGGTCAGTCACTCAGTGACTAGTGAGACTAAATCTACTTAATCTTGTAGTTAATAATTGAGGTTTCATTTAGCTAGTTGTGTAGATTCAAGAGAGAGCTTAACTTCT TATAGAATATTTGGTCGATTATCAGAAACTTCCTGAAATAACCTAGATTATCGACTAGATTCTACGAATATTTCTTTTTTAGTCTCAAGCTCTTCAAACATGCATGGCTGGTTGATTCAG CTAGTCGATCATTAAGTATATAATTAATTAATTAATTAATAGTAATACGTGCTACCCATGCAGTTCCGGCCGTCGAGCTCGTTCGACACGAAGACGACGACGACGAACGCGGGAGCTCCG GTGTGGAACGACAACGAGGCGCTGACAGTGGGGCCCAGGGGGCCGATCCTCCTCGAGGACTACCACCTGATCGAGAAGGTGGCGCACTTCGCCCGGGAGCGCATCCCGGAGCGCGTGGTC CACGCCCGCGGCGCCTCCGCCAAGGGCTTCTTCGAGTGCACCCACGACGTCACCGACATCACCTGCGCCGACTTCCTCCGGTCCCCGGGCGCCCAGACCCCCGTCATCGTCCGCTTCTCC ACCGTCATCCACGAGCGCGGCAGCCCGGAGACGATCCGCGACCCGCGCGGGTTCGCCGTCAAGTTCTACACCCGCGAGGGCAACTGGGACCTCCTCGGCAACAACTTCCCCGTCTTCTTC ATCCGCGACGGCATCAAGTTCCCCGACGTCATCCACGCCTTCAAGCCCAACCCGCGCTCCCATGTCCAGGAGTACTGGAGGGTCTTCGACTTCTTGTCCCACCACCCCGAGAGCCTCCAC ACCTTCTTCTTCCTCTTCGACGACGTCGGCATCCCCACCGATTACCGCCACATGGACGGCTTCGGCGTCAACACCTACACCTTCGTCACCCGCGACGCCAAGGCCAGGTACGTCAAGTTC CACTGGAAGCCCACCTGCGGCGTCAGCTGCTTGATGGACGACGAGGCCACGCTCGTCGGCGGCAAGAACCACAGCCACGCCACCCAGGACCTCTACGACTCCATCGCCGCCGGCAACTTC CCCGAGTGGAAGCTGTTCGTCCAGGTAGGTGATCATCCAGAAATTAACGCCTATACGATCTGAGTTCGAAGCCGCAGTACTCCTTCTAATTAATTATTTAATACTGTTAGGTGATCGACC CGGAGGAGGAGGAGAGGTTCGACTTCGACCCGCTGGATGACACCAAGACATGGCCGGAGGACGAGGTGCCGCTCCGGCCCGTGGGGCGCCTCGTTCTCAACCGCAACGTCGACAACTTCT TCAACGAGAACGAGCAGCTGGCGTTCGGGCCGGGGCTGGTGGTGCCGGGGATCTACTACTCCGACGACAAGATGCTGCAGTGCAGGGTGTTCGCGTACGCCGACACGCAGCGCTACAGGC TGGGGCCAAACTACCTGATGCTGCCGGTGAACGCGCCCAAGTGCGCCCACCACAACAACCACTACGACGGCGCCATGAACTTCATGCACCGGGACGAGGAGGTGGACTACTACCCATCGC GCCACGCGCCGCTCCGCCACGCGCCGCCGACGCCCATCACGCCGCGCCCCGTGGTGGGGAGGAGGCAGAAGGCGACGATACACAAGCAGAACGACTTCAAGCAGCCCGGGGAGAGGTACA GGTCGTGGGCGCCGGATAGACAGGAGAGGTTCATCCGCCGCTTCGCCGGCGAGCTCGCGCACCCCAAGGTCTCCCCTGAGCTCCGCGCCATCTGGGTCAACTACCTCTCCCAGGTAATTC ATACCAGCAATTTAGTATTACCTCCATTTTTGTTTTTATGACACTACTAGTTAAAGTTTGAACTAATCAACGTCATATAAAAAAAACGGAGGGAGTAGTTATTAGTAATGATTAATTGTT TTCTCTTAGTTAATCCACATGATTAACACCATGTTTAGCACAACAGTTTTATGAATCCATAGATAAATTATTTAATCCTATTTTATATGAAATATATAATTTTAAACCACTGTAGAGAAT TTGAAATTAATATGACTTAATCGCTATTAATTTGCACTAATTCCGGCAAAAAAAGCTATTAATTTGCACTAACTATGTAATTAACTCATTTACTTCATGCAGTGTGATGAGTCGTTGGGG GTGAAGATTGCGAATAGGCTCAACGTGAAGCCAAGCATGTG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCCTTGCAAGTTCCGGCCGTCGAGCTCGTTCGACACGAAGACGACGACGACGAACGCGGGAGCTCCGGTGTGGAACGACAACGAGGCGCTGACAGTGGGGCCCAGGGGGCCGATC CTCCTCGAGGACTACCACCTGATCGAGAAGGTGGCGCACTTCGCCCGGGAGCGCATCCCGGAGCGCGTGGTCCACGCCCGCGGCGCCTCCGCCAAGGGCTTCTTCGAGTGCACCCACGAC GTCACCGACATCACCTGCGCCGACTTCCTCCGGTCCCCGGGCGCCCAGACCCCCGTCATCGTCCGCTTCTCCACCGTCATCCACGAGCGCGGCAGCCCGGAGACGATCCGCGACCCGCGC GGGTTCGCCGTCAAGTTCTACACCCGCGAGGGCAACTGGGACCTCCTCGGCAACAACTTCCCCGTCTTCTTCATCCGCGACGGCATCAAGTTCCCCGACGTCATCCACGCCTTCAAGCCC AACCCGCGCTCCCATGTCCAGGAGTACTGGAGGGTCTTCGACTTCTTGTCCCACCACCCCGAGAGCCTCCACACCTTCTTCTTCCTCTTCGACGACGTCGGCATCCCCACCGATTACCGC CACATGGACGGCTTCGGCGTCAACACCTACACCTTCGTCACCCGCGACGCCAAGGCCAGGTACGTCAAGTTCCACTGGAAGCCCACCTGCGGCGTCAGCTGCTTGATGGACGACGAGGCC ACGCTCGTCGGCGGCAAGAACCACAGCCACGCCACCCAGGACCTCTACGACTCCATCGCCGCCGGCAACTTCCCCGAGTGGAAGCTGTTCGTCCAGGTGATCGACCCGGAGGAGGAGGAG AGGTTCGACTTCGACCCGCTGGATGACACCAAGACATGGCCGGAGGACGAGGTGCCGCTCCGGCCCGTGGGGCGCCTCGTTCTCAACCGCAACGTCGACAACTTCTTCAACGAGAACGAG CAGCTGGCGTTCGGGCCGGGGCTGGTGGTGCCGGGGATCTACTACTCCGACGACAAGATGCTGCAGTGCAGGGTGTTCGCGTACGCCGACACGCAGCGCTACAGGCTGGGGCCAAACTAC CTGATGCTGCCGGTGAACGCGCCCAAGTGCGCCCACCACAACAACCACTACGACGGCGCCATGAACTTCATGCACCGGGACGAGGAGGTGGACTACTACCCATCGCGCCACGCGCCGCTC CGCCACGCGCCGCCGACGCCCATCACGCCGCGCCCCGTGGTGGGGAGGAGGCAGAAGGCGACGATACACAAGCAGAACGACTTCAAGCAGCCCGGGGAGAGGTACAGGTCGTGGGCGCCG GATAGACAGGAGAGGTTCATCCGCCGCTTCGCCGGCGAGCTCGCGCACCCCAAGGTCTCCCCTGAGCTCCGCGCCATCTGGGTCAACTACCTCTCCCAGTGTGATGAGTCGTTGGGGGTG AAGATTGCGAATAGGCTCAACGTGAAGCCAAGCATGTG |
Retrieve as FASTA
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