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Entry information : Mt2CysPrx02 ( Medtr7g105830.1[4.0] / Mt2CysPrxB)
Entry ID 5151
Creation 2008-10-08 (Christophe Dunand)
Last sequence changes 2016-04-07 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-04-07 (Christophe Dunand)
Peroxidase information: Mt2CysPrx02 ( Medtr7g105830.1[4.0] / Mt2CysPrxB)
Name (synonym) Mt2CysPrx02 ( Medtr7g105830.1[4.0] / Mt2CysPrxB)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Mt2CysPrx02
start..stop		 S start..stop
Ps2CysPrx 461 8.09e-167 3..265 2..263
Pau2CysPrx01 424 2.44e-152 3..265 2..261
Mt2CysPrx01 424 3.49e-152 1..265 1..267
Pv2CysPrx01-2 423 7.88e-152 3..266 2..261
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 42967177..42967380 202 N° 2 42968587..42968661 73 N° 3 42968736..42968817 80 N° 4 42968900..42968979 78
N° 5 42970052..42970177 124 N° 6 42970441..42970554 112 N° 7 42970687..42970803 115  
join(42967177..42967380,42968587..42968661,42968736..42968817,42968900..42968979 ,42970052..42970177,42970441..42970554,42970687..42970803)


exon

Literature and cross-references Mt2CysPrx02 ( Medtr7g105830.1[4.0] / Mt2CysPrxB)
Literature Liu,J., Scott,A.D., Harris,A.R., Gonzales,R.A., Bell,C.J., Flores ,H.R., Inman,J.T., Weller,J.W., May,G.D. and Harrison,M.J. Expressed Sequence Tags from the Samuel Roberts Noble Foundation. Medicago truncatula phosphate-starved leaf library
Protein ref. UniProtKB:   G7ZUV5
DNA ref. Phytozome 12:   chr7 (42967177..42970803)
Cluster/Prediction ref. Phytozome Gene 12:   31082960 UniGene:   Mtr.6479
Omic ref. Gene atlas:   Mtr.25633.1.S1_at Legoo:   Mtr.25633.1.S1_at
Protein sequence: Mt2CysPrx02 ( Medtr7g105830.1[4.0] / Mt2CysPrxB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   265
PWM (Da):   %s   29017.98 Transmb domain:   %s   i7-29o
PI (pH):   %s   6.52
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACCSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSRRSFVVRASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT
EITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVC
PAGWKPGEKSMKPDPKLSKEYFSAV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 6 introns) and 42 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGCTGCTCAGCTCCATCTGCTTCTCTCTTATCTTCAAACCCTAACATCCTCTTCTCTCCCAAATTATCTTCTCCACCACATCTTTCTTCTCTCTCCATCCCCAATGCCTCCAAT
TCTCTCCCTAAACTACGCACTTCTCTCCCCCTTTCCCTCAATCGCTTCACTTCTTCTCGCCGCAGTTTCGTCGTTAGAGCTTCTCTGTAAGTTCTTCAACAATCCCTCTTTGTTGAGCTT
ATGTGTTTTGTTGTGGTTGAATTTCTGTTTGCAGCATTGTCCAGCTTATCAATTGATAGTCTATGTTTGGATTTAAGTTTATAAAATTACTTTCGATTATACTTCTTTTTTGCAAAATTA
AGTTTCATTAAAATATGAGTTTGGATAACTTTTTCTCAATTACATGTATCACATAATGTAATTTGTTTAGTGATACTTATCAAAAGTGCTTTTGAATGAGTAATTCGTATGACTTTTTAT
AATGCAGTATAAGGGTCTATTTGGCAAGTCCAAATTTTTAGCTTATAACTTATGTCTTATAAGTCCATTTGATTAAAAATGACCCGTTTGGTAACAATCACTTTCTTATGAGCTTATAAC
GTTTTTCGATAAGCTAATTCAAGTAGCTTAAAGCTTATCACTATTTATTCAAATTTTACCCATGTATTCTTAATTGAAAAAAAAAAAAATATATTAACTAAATATATTATCTTTATGTCA
TTTCATATTTATAAGCTAGTACAATGGCTAATTTACTATCTTTTACAAATTCAATCGGCTAGCTTATTAACCAAACATTACAAATTCAATCGGCTAGCTTATCTGCTATCACCTATAAGC
TAACTTATCGGCCATTCACTATCTTTTACCAAATAGAGGCTAAGATGTATAGGGTAAAATGGTAAATAAAAAAGTATTAGAGACATTGCTTTCATGGACACATGCACAACATCAGGTAGC
CCAATGAATCTTTGGATAGACTTTGATACCATCTTAGAATTTTAGGTTGGGCAGAACTTTACCTTACAAAACCGACTTGTAAGCTGAAGATTGCACTCACTTATAAACCCATGTTCAGAC
CTTATATCTTCCAATGCGAGTCTCGTAACAAATATGAGCCATTGTTGCATTGCAGTGAATAATTTTTTTTTTGTAATGATTGTAAATTTTGTAATTAGAATTTGAATAGTTAAAAACAAG
ATGCGCAATTAGGCATTCCTGACTCTTCCTCCTTGAGGCTTGTAAGCGTTGAAATGGAATCTCTAAAATATTTCATTCATTTGTGTGCTGGTCTTCATCTCCAATTATTGACTGTTGTAA
CTTCATTACTAAAGTTGAGAGCACAAGCTATAGAGCATACTTTTTCTCTTGCTTTAATCTGTGAATTAATTTTTTATTTTTCTGTATTAAAGAGCGAACTACCATTAGTTGGGAATGCAG
CACCAGATTTTGAAGCCGAGGCTGTTTTTGATCAGGAGTTTATCAAGAGGTAAACAGATTGTTGCTTGTGAATTGTTTTATTTCATAATTTATTTATCTTTCACTAAAGCAATGTTTTTT
CAGGTCAAACTATCTGAATATATTGGGAAAAAATATGTTATCCTCTTTTTTTACCCATTGGACTTCACATTTGTTTGTCCCACAGAGGTTAGTTGACCCTTTAGTAAACTATAGTTGTAG
ATGCCAAATCTTTTCTTTTTTCATCCTAACATCTGTTAACTGTCTACAGAAATCACTGCTTTCAGTGACCGCCATGCAGAATTTGCGGAACTTAATACAGAGATATTGGGTGTTTCAGTT
GACAGTGTGTGGTTAGTTCTGACCTTATCTTTTAACTCATATAGATTTTATTGATATGACATTGTTTGGTTCACGCTGCTGATTTTGTCTAGTGGTAAAAGGCATTGCTTGCTGTCATTT
TTTTTCGTGATATGAATTACTTATGCGTGCCCATGCATATTTGCCAATGAAGAAAATGAAGGGTGTTCAAAGACTTGGATCGCTTGCAGTCTCACACATTTTCCACCTGTGCATAGTTCA
TGTTTTGAAGTTCTTAGTATAGTAGGCAAATCTGCATGGACTCCTTCAGTGGCGGAGCTACTATTGGGATGGGCTGATGCCATGGCACCGTTAATTTTTTATATACTAATCTAGGAGAAT
TTCGACATGAAATTTGCACCTGGCGCAGTAGTTAAGGCCATTGTGTAGCTTAGAGGTTGAGGGTTCCAGTCAGTCTGAACCCTGTTTTAGAATTTTCGTTGATGTAAATCCTCCCTTTTT
TACACTTTCTTTAGCAAAAATGTTGAATGTCAGTTTTGAAATCAGTTTGTATAGGTTAAAATCACAGCAAAACTAATCACTAGACCAGCAAACTAATTTATATATTCTTTATAGATATGA
CACTTACAAATTTCGATCATGCTCCGCAACTGGACTCCTTAGTTTTAATTTTCCTCTGCAACTGGCTACATGTAGTATGGAAAAATAGAATGGTTTGGGGAAATTCCTTCCTAGATAATG
GAAAGTCAGAATATCAGTTGGTGAACTCATTCAAAATTTGTTAATTGCAAATGTGTTTTCGTTGATCTTCTGACCACAAATGCAGTGTGACACAAATTTCCTACTAGCACATGCATGCAT
TATGTGGTGATATACTATATCTGTACATTCACAGTTATCTTTTTATATCCAATCCAAAGACATTTAGAGGTTAATGAGTTGGATCCAAATATGGTTTATGATTGAACATTATCGTATAAT
TTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTTGTTATTGATGTTGTTGTCCAATCCAAATACACTTTTAAAGTCTGCTTCTTCTTGATTAGTGGTGCTATTGTTATTATTG
TAGTTCTCGCACCTTGCATGGGTTCAAACTGACAGAAAGTCCGGTGGTCTCGGCGACTTGAACTATCCTTTGGTTTCTGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTGATT
CCTGATCAGAGGTAAATTTTGACACCACGACTTAAATTGTGGCTATTCATTTTCTTCCTATCAAATTCAACATCTGTTGTACTATGATTTCAATATATTCTCTGGAATGAAATATAGGAT
GCTTTCTATGTAATAGCTTTACTATCTTGCATGAAGTAGCTTTGTGACTTGTCTAGGTAGTAGGTTCAAATGCAACGCTATGAGCTGTTGTTTTTTATTCCACTTTTTTTACGGATCTGT
GTTACAATGATTGCAAATGTTTCTGATGATTTAGGGGATAGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAACATTCTACCATCAACAACCTCGGAATTGGTAGAAG
TGTTGATGAGACAAAGAGAACTCTCCAGAGGTAATTATATGTGATTTGCACCATACCAGGATTTACCACTTTTTAGTTATCTGTTTTTTCTCTTCTTCCTTTTACCCTTCTAAGTTCTAG
TCTTAAATAATGTTTGACCCCATACATGCATTGGATTTGCAGGCCTTGCAGTATGTGCAGGAGAACCCTGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCA
GACCCTAAACTTAGCAAAGAGTACTTTTCTGCAGTGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGCTGCTCAGCTCCATCTGCTTCTCTCTTATCTTCAAACCCTAACATCCTCTTCTCTCCCAAATTATCTTCTCCACCACATCTTTCTTCTCTCTCCATCCCCAATGCCTCCAAT
TCTCTCCCTAAACTACGCACTTCTCTCCCCCTTTCCCTCAATCGCTTCACTTCTTCTCGCCGCAGTTTCGTCGTTAGAGCTTCTAGCGAACTACCATTAGTTGGGAATGCAGCACCAGAT
TTTGAAGCCGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTCAAACTATCTGAATATATTGGGAAAAAATATGTTATCCTCTTTTTTTACCCATTGGACTTCACATTTGTTTGTCCCACA
GAAATCACTGCTTTCAGTGACCGCCATGCAGAATTTGCGGAACTTAATACAGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACTGACAGAAAGTCC
GGTGGTCTCGGCGACTTGAACTATCCTTTGGTTTCTGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTGATTCCTGATCAGGGGATAGCATTGAGAGGATTGTTCATTATTGAC
AAGGAAGGGGTTATCCAACATTCTACCATCAACAACCTCGGAATTGGTAGAAGTGTTGATGAGACAAAGAGAACTCTCCAGGCCTTGCAGTATGTGCAGGAGAACCCTGATGAAGTTTGC
CCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTTTCTGCAGTGTAG

Retrieve as FASTA