Entry information : PtKat01 (POPTR_0002s01080 / Potri.002G009800)
| Entry ID | 5155 |
|---|---|
| Creation | 2007-04-08 (Christophe Dunand) |
| Last sequence changes | 2010-07-08 (Marie Brette (Scipio)) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-08 (Qiang Li) |
Peroxidase information: PtKat01 (POPTR_0002s01080 / Potri.002G009800)
| Name (synonym) | PtKat01 (POPTR_0002s01080 / Potri.002G009800) | ||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Catalase [Orthogroup: Kat001] | ||||||||||||||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Tissue types | Buds Leaves Stems |
||||||||||||||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5155' 'complement(join(570956..571015,571113..571206,571305..571372,571617..571706,571884..572660,573141..573418,574245..574341,574572..574586))' |
Exons►
|
||||||||||||||||||||||||||||||||||||||||||||||||
Literature and cross-references PtKat01 (POPTR_0002s01080 / Potri.002G009800)
| Literature | Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences. Mol. Ecol. 15 (5), 1275-1297 (2006).
|
|---|---|
| DNA ref. | Phytozome 12: Chr02 (574586..570956) |
| Cluster/Prediction ref. | UniGene: Pth.3772 |
| Omic ref. | ePlant: Potri.002G009800 |
Protein sequence: PtKat01 (POPTR_0002s01080 / Potri.002G009800)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic and 10 ESTs. | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
