Entry information : VvAPx03 (GSVIVT01024035001)
Entry ID 5171
Creation 2007-04-11 (Christophe Dunand)
Last sequence changes 2011-11-25 (Qiang LI)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: VvAPx03 (GSVIVT01024035001)
Name (synonym) VvAPx03 (GSVIVT01024035001)
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation Peroxisomal
Tissue types Berries
Flowers
Inflorescences
Leaves
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvAPx03
start..stop
S start..stop
HaAPx03 508 0 1..289 1..285
CsAPx03 507 0 1..289 1..287
CclAPx03 505 0 1..289 1..287
RcAPx02 504 0 1..289 1..288
Gene structure Fichier Exons


exon

Literature and cross-references VvAPx03 (GSVIVT01024035001)
Literature REFERENCE 1 Reid,K.E., Liao,N., Peng,F., Schlosser,J., Kirkpatrick,R., Shukin ,R., Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Bowen,P., Bohlmann,J., Martinez Zapater,J.M. and Lund,S.T. Expressed sequence tags from grapevine (Vitis vinifera cv. Cabernet Sauvignon).
DNA ref. Phytozome 12:   chr3 (1594273..1587828)
Cluster/Prediction ref. UniGene:   Vvi.1497
Protein sequence: VvAPx03 (GSVIVT01024035001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   31621.31 Transmb domain:   %s   o260-282i
PI (pH):   %s   7.68
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALPVVDTDYLKEIDKARRDLRALIASKNCAPIMLRLAWHDAGTYDVHTKTGGPNGSIRTEEEYSHGSNNGLKIAIDFEEVKSKYPKITYADLYLSGVVAVEITGGPTIDFVPGRKDSMI
SPKEGRLPAAKK
GVSHLRDIFYRMGLSGKDIVALSGGHTGRAHPERSGFDGPWTKNPLKFDNSYFVELLQGESEGLLKLPTDKALLDDPEFRGYVELYADEDAFFRDYAVSHKKLSELGF
TPSSSSGSKVIAKDSTVLAQSAVGVVVAAAVVILSYFYEVRKRMK*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 8 introns, incorrect prediction with FGENESH) and 44 ESTs. Cultivar="Pinot Noir", "Chardonnay", "Cabernet Sauvignon" and "Thompson-seedless".
DNA
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CDS
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