Entry information : VvAPx07 (GSVIVT01009079001)
Entry ID | 5174 |
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Creation | 2007-04-12 (Christophe Dunand) |
Last sequence changes | 2007-04-12 (Christophe Dunand) |
Sequence status | complete |
Reviewer | Qiang Li |
Last annotation changes | 2012-01-05 (Qiang LI) |
Peroxidase information: VvAPx07 (GSVIVT01009079001)
Name (synonym) | VvAPx07 (GSVIVT01009079001) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Class | Ascorbate peroxidase [Orthogroup: APx2004] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Vitaceae Vitis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism | Vitis vinifera (Grape) [TaxId: 29760 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue types | Berries Inflorescences Leaves Pedicel Pericarps |
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Inducer | N/D |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5174' 'complement(join(4766006..4766116,4766966..4767100,4768030..4768167,4769629..4769735,4770205..4770335,4770590..4770630,4770735..4770800,4770937..4770971,4771063..4771147,4771985..4772083,4772172..4772258))' |
Exons►
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Literature and cross-references VvAPx07 (GSVIVT01009079001)
Literature | REFERENCE 1 Reid,K.E., Liao,N., Peng,F., Schlosser,J., Kirkpatrick,R., Shukin ,R., Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Bowen,P., Bohlmann,J., Martinez Zapater,J.M. and Lund,S.T. Expressed sequence tags from grapevine (Vitis vinifera cv. Cabernet Sauvignon). REFERENCE 2 Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome. |
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DNA ref. | Phytozome 12: chr18 (4772258..4766006) |
Cluster/Prediction ref. | UniGene: Vvi.6867 |
Protein sequence: VvAPx07 (GSVIVT01009079001)
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (Chromo 4, 10 introns, incorrect prediction with FGENESH) and 21 ESTs. cultivar="Pinot Noir", "Chardonnay", "PN40024" and "Cabernet Sauvignon". Also found in AM471991 (BAC end). |
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DNA ► Send to BLAST |
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CDS► Send to BLAST |
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