Entry information : ZmAPx-R01(Zm00001d031494 / GRMZM2G047968[6a])
Entry ID 5183
Creation 2007-04-13 (Christophe Dunand)
Last sequence changes 2011-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2022-12-30 (Christophe Dunand)
Peroxidase information: ZmAPx-R01(Zm00001d031494 / GRMZM2G047968[6a])
Name ZmAPx-R01(Zm00001d031494 / GRMZM2G047968[6a])
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Flowers
Mixed tissues
Seedlings
Silks
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmAPx-R01
start..stop
S start..stop
SbAPx-R 559 0 1..337 1..333
SiAPx-R 520 0 1..337 1..334
ObrAPx-R 463 2e-165 1..337 1..331
BdiAPx-R 453 1e-161 1..337 1..329
Literature and cross-references ZmAPx-R01(Zm00001d031494 / GRMZM2G047968[6a])
Literature Qiu,F., Cui,F., Guo,L., Ashlock,D.A, Wen,T.J. and Schnable,P.S. Expressed Sequence Tags from B73 Maize Seedlings and Silks. Unpublished (2001)
DNA ref. Phytozome 12:   1 (189565110..189567815)
Cluster/Prediction ref. UniGene:   Zm.2846
Protein sequence: ZmAPx-R01(Zm00001d031494 / GRMZM2G047968[6a])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337
PWM (Da):   %s   36343.58  
PI (pH):   %s   8.34
Sequence 0
Send to BLAST
Send to Peroxiscan
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MELNSIPYIA SWSSSSSCFY YSYSRCACRG TRDGKLVTKA SAAGRKRAAD SVCSQLSEQG TEDSISGPRS SWRIRRRDLA SAILLPFLIP RVNISIAAEI YDASIIRSGV RSVLTKGKAA  GVLRLVFHDA GTFEIGDGSG GMNGSIIYEV DRPENIGLNR SIKILRKAKE GIDNVQKVSW ADLIAVAGAE AVALCGGPEI PVRLGRVDSS ADPSGKLPEE TLDAASLKTL FSKKGFSAQE 
LVVLSGAHTI GGKGFGSPVV FDNTYFKVLL DNRPPQTSST GNGMAAMVGL RTDWALTEDD ECLRWIRIYA EDQARFFDDF RDTYIKLVDS GASWRTA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 10 introns) and 15 ESTs (Unigene). Cultivar="B73". Incorrect prediction from Phytozome, sequence shift + mismatches with DNA from maizeseq.org.
join(63..148,237..349,520..610,867..994,1234..1304,1431..1473,1562..1658,1802..1882,2203..2327,2411..2483,2584..2670)
DNA
Send to BLAST
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ATGGAGCTCA ACAGCATCCC CTATATTGCG TCGTGGTCTT CCTCCTCGAG CTGCTTCTAC TACAGCTACA GTCGCTGCGC CTGCAGGTGA TGTTAGAGAA CTCTCGTTCC CGTACGCAAA  TGATGCAGTC TTGTCTGCAT GGAAGCAAAC GACCTGAGAA ATCCTTATGT ACAGAGGTAC AAGAGATGGG AAGCTGGTAA CAAAAGCTTC TGCAGCTGGT CGTAAGCGTG CTGCTGATTC  AGTATGTTCA CAACTCTCTG AGCAGGGAAC TGAAGATTCC ATTTCAGGTA CACATCGCTG TTCTTAGCCT CATATATCAC TTGGTTCCAA ACCGTTTTTT TGCTGGAGCT GTAAATATTT  TAATGACAAT GGGAAACTTT TTTGTTGCTT GGGCTGATGC CGGACCATGG AAATTTAGCA TGGTCAACTC AAAGTTTCTC TTCTCTGGTG GTTCCAGGTC CTAGATCTTC CTGGCGTATA  AGGAGGAGAG ACCTTGCTTC TGCCATTTTA CTCCCTTTTC TGATTCCTCG TGTTAACATC TCTATCGCGT AAGTAGTGCA TTATTATCAA AGAATTTAGC TATCCAGCTC TTGAAATTAC  TAGCTGACAT TCAAAAGAGC GTCTTCTTGA TGTTTCAAAT GGTAAATACT GTGAGAAAGG GGAAGCATGT AATGAGCCAC AGTTGAATCT TGTAGACATA GGACAGTGAT CTAGTAAAGG  AAAGATCCTT AAATCTGGTT TCTTGCTCCT AAAACAGTGA TGCCATTGCC ATCTATATGA GAAGTTATCT GGTTGATTTC ACAGGGCTGA GATATACGAC GCATCAATTA TTCGAAGTGG  TGTGAGGAGT GTTTTAACCA AGGGCAAGGC TGCTGGTGTG CTTCGGTTGG TTTTCCATGA TGCAGGGACT TTTGAAATTG GGGACGGATC AGGTTAGCCT CTTTAGTGTG TTTGAGGGGA  AAAAAGCATT TGTGTACGAA AAAATGATCC AAAACGGTAT TGCTAAGAAG ATACAGAATT CTATTTTTAA AGGAAAGAAA TATCATCATT TGTGGTGCAT ACATCGGTAG GATTGCTACC  TGACTGCTAT ATTAGTTCAG CAAAGAGACA TGATATTAGT TCAGCAAAGA GACATGACTT TCGTCAGACT ACTAACAGTG ATACCTTCCA GGTGGCATGA ATGGCTCTAT AATTTATGAA  GTTGACAGGC CTGAAAACAT TGGCCTAAAT AGATCCATAA AGGTGGGTGC GTGTCTTTGT GACGATAAAT TGCTTTATCT TTACTCGTTT TCTTGAAGAA TATCATATCC TTCTTGATGT  CGTATTTCCT TCAGTTGACG TCTACTTAAT CACATCATAA CTGAACAGAT ACTAAGAAAA GCAAAAGAAG GAATCGACAA CGTTCAGAAA GGTATGTAAA CCATGCCATC TTCTGTCCTG  CACTTTCTTT ACGAAAACTC CAGTTTGGGA GTCAAATCTC CTGCTGTTTG CGCTGACAGT GTCGTGGGCG GATCTGATTG CCGTGGCTGG CGCTGAGGCA GTTGCGCTCT GTGGCGGGCC  TGAGATTCCA GTAAGGCTAG GAAGAGTAGA TTCTAGGTGA GAAATCACAG TGATTTTTTT TATTTTACTC CTCCAACTTA CAGTTTTAAG AAAGCTATGT ATGTATATAA ATATTCCAGA  TTGTGTAGTG TCTTTGTATC AGTCAGTTTT CTGAAGAACA TGGGTTATTT TTGCAACAGT GCTGACCCTA GTGGAAAAGT TCCTGAAGAA ACATTGGAGG GGGGGTCCTT GAAGACATTA  TTAAGCGCCA AGGGCTCTTC GTGAGATGCC CCCCACCCTA AAAGGGGGGG GGAGGAACTA GAAACTAATG CGGTTCTGCT ATTGAAAAAA AGGAGAAAAA GACCATnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnAGAT CCCCCCTTTT TTTTGTCAAA TTAAATATAC  ATACGCATTC CAGTTCTCAA TTTAATCCCC TGTGGCTTGC AGCCATTGTT CCCATATCCA TGTCTGAAAT CCATGTTTGG CGATTAACGA CAGGGCGCAG GGAGCTGGTT GTTTTGTCGG  GAGCGCACAC GATTGGAGGG AAAAGGGTTT CGGGAGTCCC AGTTGTTTTC GACAACACCT ATTTCAAGGT GCTGCTCGAT AATAGGCCGC CGCAGACATC TTCGAGTAAG TGCATCTTCC  TCACCAATTG CTTTTGATTG ATGTCTATGC TTTTATCAGA ACTTACTGCG TGTTCCTCTG TGAAGAAGCT GGCAATGGCA TGGCGGCGAT GGTTGGGCTG CGCACGGACT GGGCGCTCAC  TGAAGACGAC GAGTGCTTGA GGTAGTTTAT GAAACCTCAG CTACCTCGGT TTCTGAAGAC ACCAAGAAAA TGCTAGATGC TCCATCAGCT TAATGACGCT GCGTATGTTT GAAACCTGCA 
GATGGATCAG GATCTACGCA GAGGACCAAG CTAGGTTCTT CGACGACTTC AGGGACACGT ACATCAAGCT CGTAGACAGC GGAGCCTCGT GGAGAACAGC TTGA 

Retrieve as FASTA  
CDS
Send to BLAST
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ATGGAGCTCA ACAGCATCCC CTATATTGCG TCGTGGTCTT CCTCCTCGAG CTGCTTCTAC TACAGCTACA GTCGCTGCGC CTGCAGAGGT ACAAGAGATG GGAAGCTGGT AACAAAAGCT  TCTGCAGCTG GTCGTAAGCG TGCTGCTGAT TCAGTATGTT CACAACTCTC TGAGCAGGGA ACTGAAGATT CCATTTCAGG TCCTAGATCT TCCTGGCGTA TAAGGAGGAG AGACCTTGCT  TCTGCCATTT TACTCCCTTT TCTGATTCCT CGTGTTAACA TCTCTATCGC GGCTGAGATA TACGACGCAT CAATTATTCG AAGTGGTGTG AGGAGTGTTT TAACCAAGGG CAAGGCTGCT  GGTGTGCTTC GGTTGGTTTT CCATGATGCA GGGACTTTTG AAATTGGGGA CGGATCAGGT GGCATGAATG GCTCTATAAT TTATGAAGTT GACAGGCCTG AAAACATTGG CCTAAATAGA  TCCATAAAGA TACTAAGAAA AGCAAAAGAA GGAATCGACA ACGTTCAGAA AGTGTCGTGG GCGGATCTGA TTGCCGTGGC TGGCGCTGAG GCAGTTGCGC TCTGTGGCGG GCCTGAGATT  CCAGTAAGGC TAGGAAGAGT AGATTCTAGT GCTGACCCTA GTGGTAAACT TCCTGAAGAA ACATTGGACG CAGCTTCCTT GAAGACATTA TTCAGCAAGA AGGGCTTTTC GGCGCAGGAG  CTGGTTGTTT TGTCGGGAGC GCACACGATT GGAGGGAAAG GGTTCGGGAG TCCAGTTGTT TTCGACAACA CCTATTTCAA GGTGCTGCTC GATAATAGGC CGCCGCAGAC ATCTTCGACT  GGCAATGGCA TGGCGGCGAT GGTTGGGCTG CGCACGGACT GGGCGCTCAC TGAAGACGAC GAGTGCTTGA GATGGATCAG GATCTACGCA GAGGACCAAG CTAGGTTTTT CGACGACTTC 
AGGGACACGT ACATCAAGCT CGTAGACAGC GGAGCCTCGT GGAGAACAGC TTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
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CTTTTCATTT CAGAGCTGTG GTAGACTGGT AGGTTGGTAG CTGTTACTGA AAAACTAAGA GAAGGCAGGA CGGGGAAAGG AGATGGAGCT CAACAGCATC CCCTATATTG CGTCGTGGTC  TTCCTCCTCG AGCTGCTTCT ACTACAGCTA CAGTCGCTGC GCCTGCAGAG GTACAAGAGA TGGGAAGCTG GTAACAAAAG CTTCTGCAGC TGGTCGTAAG CGTGCTGCTG ATTCAGTATG  TTCACAACTC TCTGAGCAGG GAACTGAAGA TTCCATTTCA GGTCCTAGAT CTTCCTGGCG TATAAGGAGG AGAGACCTTG CTTCTGCCAT TTTACTCCCT TTTCTGATTC CTCGTGTTAA  CATCTCTATC GCGGCTGAGA TATACGACGC ATCAATTATT CGAAGTGGTG TGAGGAGTGT TTTAACCAAG GGCAAGGCTG CTGGTGTGCT TCGGTTGGTT TTCCATGATG CAGGGACTTT  TGAAATTGGG GACGGATCAG GTGGCATGAA TGGCTCTATA ATTTATGAAG TTGACAGGCC TGAAAACATT GGCCTAAATA GATCCATAAA GATACTAAGA AAAGCAAAAG AAGGAATCGA  CAACGTTCAG AAAGTGTCGT GGGCGGATCT GATTGCCGTG GCTGGCGCTG AGGCAGTTGC GCTCTGTGGC GGGCCTGAGA TTCCAGTAAG GCTAGGAAGA GTAGATTCTA GTGCTGACCC  TAGTGGTAAA CTTCCTGAAG AAACATTGGA CGCAGCTTCC TTGAAGACAT TATTCAGCAA GAAGGGCTTT TCGGCGCAGG AGCTGGTTGT TTTGTCGGGA GCGCACACGA TTGGAGGGAA  AGGGTTCGGG AGTCCAGTTG TTTTCGACAA CACCTATTTC AAGGTGCTGC TCGATAATAG GCCGCCGCAG ACATCTTCGA CTGGCAATGG CATGGCGGCG ATGGTTGGGC TGCGCACGGA  CTGGGCGCTC ACTGAAGACG ACGAGTGCTT GAGATGGATC AGGATCTACG CAGAGGACCA AGCTAGGTTT TTCGACGACT TCAGGGACAC GTACATCAAG CTCGTAGACA GCGGAGCCTC  GTGGAGAACA GCTTGACTAG AACTGCCTGT TTCTTTACAG TGTTAGGCCT TGTTCGGTTA TAAGGGAATA AATCCCCCCA TGGATTTAAT CCGGATCTGG ATTGGGTGAA TCCATATGTC  ACACCCAATC CTATGGTGGG ATTAAATACA CCATTTAATC CATGTATCTC TTAAAACTAG TTATTCTTTT GATTCATGGA TTTTAATATA AACTTGTGCA ACATCTTCAT GGATTTGCTC 
CATACATAAT GAGCTATGGA TAGAATCCAT GCCTTTCATA GTTT 

Retrieve as FASTA