Entry information : SbAPx-R (Sobic.007G205600.1 [2.1] / Sb07g027300 [1.4])
Entry ID | 5185 |
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Creation | 2007-04-13 (Christophe Dunand) |
Last sequence changes | 2011-01-18 (Toky Ramarohetra (Scipio)) |
Sequence status | complete |
Reviewer | Messaoudi |
Last annotation changes | 2014-08-04 (Messaoudi) |
Peroxidase information: SbAPx-R (Sobic.007G205600.1 [2.1] / Sb07g027300 [1.4])
Name (synonym) | SbAPx-R (Sobic.007G205600.1 [2.1] / Sb07g027300 [1.4]) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Class | Ascorbate peroxidase related [Orthogroup: APx-R001] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism | Sorghum bicolor [TaxId: 4558 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular localisation | Cytosolic |
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Tissue types | Leaves Roots |
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Inducers | Drought Oxidative stress |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5185' 'complement(join(62398138..62398240,62398395..62398461,62398621..62398742,62398954..62399037,62399165..62399261,62399360..62399402,62399544..62399614,62399949..62400076,62400334..62400424,62400622..62400734,62400824..62400906))' |
Exons►
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Literature and cross-references SbAPx-R (Sobic.007G205600.1 [2.1] / Sb07g027300 [1.4])
Literature | Cordonnier-Pratt,M.-M., Zhang,D., McCartor,K., Nguyen,H.T. and Pratt,L.H.. An EST Database from Sorghum: Subtracted post-flowering drought stressed leaf tissues
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DNA ref. | Phytozome 12: chromosome_7 (62400906..62398138) |
Cluster/Prediction ref. | UniGene: Sbi.7749 |
Protein sequence: SbAPx-R (Sobic.007G205600.1 [2.1] / Sb07g027300 [1.4])
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (chromo 7, 10 introns) and 6 ESTs. Cultivar="B35" and "BTx623". | ||||||||||||
DNA ► Send to BLAST |
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CDS► Send to BLAST |
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